RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PRG4Q92954 1404 aaPredicted RBP33.34■■■□□ 2.93
TPM4-208ENST00000588410 SHROOM2Q13796 1616 aa33.33■■■□□ 2.93
TPM4-208ENST00000588410 RUSC2Q8N2Y8 1516 aa33.28■■■□□ 2.92
TPM4-208ENST00000588410 KIAA0586Q9BVV6 1533 aa33.26■■■□□ 2.91
TPM4-208ENST00000588410 RAPGEF2Q9Y4G8 1499 aa33.1■■■□□ 2.89
TPM4-208ENST00000588410 CARMIL2Q6F5E8 1435 aa32.98■■■□□ 2.87
TPM4-208ENST00000588410 NPM1P06748 294 aaKnown RBP eCLIP32.96■■■□□ 2.87
TPM4-208ENST00000588410 IQGAP2Q13576 1575 aa32.96■■■□□ 2.87
TPM4-208ENST00000588410 TTBK1Q5TCY1 1321 aaPredicted RBP32.93■■■□□ 2.86
TPM4-208ENST00000588410 PTPRGP23470 1445 aa32.92■■■□□ 2.86
TPM4-208ENST00000588410 TNIKQ9UKE5 1360 aa32.89■■■□□ 2.86
TPM4-208ENST00000588410 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
TPM4-208ENST00000588410 CSRNP3Q8WYN3 585 aa32.83■■■□□ 2.85
TPM4-208ENST00000588410 UGGT2Q9NYU1 1516 aa32.77■■■□□ 2.84
TPM4-208ENST00000588410 DISP1Q96F81 1524 aa32.77■■■□□ 2.84
TPM4-208ENST00000588410 ADCY10Q96PN6 1610 aa32.76■■■□□ 2.83
TPM4-208ENST00000588410 EEA1Q15075 1411 aa32.74■■■□□ 2.83
TPM4-208ENST00000588410 FAM69CQ0P6D2 419 aa32.67■■■□□ 2.82
TPM4-208ENST00000588410 FAM9AQ8IZU1 332 aaPredicted RBP32.67■■■□□ 2.82
TPM4-208ENST00000588410 MAPKBP1O60336 1514 aa32.67■■■□□ 2.82
TPM4-208ENST00000588410 UACAQ9BZF9 1416 aa32.65■■■□□ 2.82
TPM4-208ENST00000588410 GOLGA3Q08378 1498 aa32.64■■■□□ 2.82
TPM4-208ENST00000588410 CHIC1Q5VXU3 224 aa32.64■■■□□ 2.82
TPM4-208ENST00000588410 KIAA0556O60303 1618 aa32.63■■■□□ 2.81
TPM4-208ENST00000588410 ABCC10Q5T3U5 1492 aa32.62■■■□□ 2.81
TPM4-208ENST00000588410 CTTNBP2Q8WZ74 1663 aa32.62■■■□□ 2.81
TPM4-208ENST00000588410 ABCC2Q92887 1545 aa32.61■■■□□ 2.81
TPM4-208ENST00000588410 UHRF1BP1LA0JNW5 1464 aa32.6■■■□□ 2.81
TPM4-208ENST00000588410 DIP2BQ9P265 1576 aa32.48■■■□□ 2.79
TPM4-208ENST00000588410 KIF13AQ9H1H9 1805 aa32.47■■■□□ 2.79
TPM4-208ENST00000588410 ASXL2Q76L83 1435 aa32.46■■■□□ 2.79
TPM4-208ENST00000588410 PLB1Q6P1J6 1458 aa32.46■■■□□ 2.79
TPM4-208ENST00000588410 P3H3Q8IVL6 736 aa32.45■■■□□ 2.79
TPM4-208ENST00000588410 KDM5BQ9UGL1 1544 aa32.43■■■□□ 2.78
TPM4-208ENST00000588410 RANGAP1P46060 587 aaPredicted RBP32.39■■■□□ 2.78
TPM4-208ENST00000588410 KIF21BO75037 1637 aa32.33■■■□□ 2.77
TPM4-208ENST00000588410 ABCA8O94911 1581 aa32.31■■■□□ 2.76
TPM4-208ENST00000588410 EHMT2Q96KQ7 1210 aa32.3■■■□□ 2.76
TPM4-208ENST00000588410 ZCCHC11Q5TAX3 1644 aaKnown RBP32.29■■■□□ 2.76
TPM4-208ENST00000588410 UBTFP17480 764 aaKnown RBP32.27■■■□□ 2.76
TPM4-208ENST00000588410 SAMD9Q5K651 1589 aa32.25■■■□□ 2.75
TPM4-208ENST00000588410 EPRSP07814 1512 aaKnown RBP32.25■■■□□ 2.75
TPM4-208ENST00000588410 GLI2P10070 1586 aa32.24■■■□□ 2.75
TPM4-208ENST00000588410 WDR7Q9Y4E6 1490 aa32.22■■■□□ 2.75
TPM4-208ENST00000588410 ARID3CA6NKF2 412 aa32.21■■■□□ 2.75
TPM4-208ENST00000588410 KCNH8Q96L42 1107 aa32.17■■■□□ 2.74
TPM4-208ENST00000588410 FHOD3Q2V2M9 1422 aa32.17■■■□□ 2.74
TPM4-208ENST00000588410 TSPOAP1O95153 1857 aa32.13■■■□□ 2.73
TPM4-208ENST00000588410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.11■■■□□ 2.73
TPM4-208ENST00000588410 HNRNPUL2Q1KMD3 747 aaKnown RBP32.11■■■□□ 2.73
TPM4-208ENST00000588410 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
TPM4-208ENST00000588410 ATP10BO94823 1461 aa32.1■■■□□ 2.73
TPM4-208ENST00000588410 KDM6BO15054 1643 aa32.1■■■□□ 2.73
TPM4-208ENST00000588410 TEX14Q8IWB6 1497 aa32.05■■■□□ 2.72
TPM4-208ENST00000588410 RAPGEF6Q8TEU7 1601 aa32.05■■■□□ 2.72
TPM4-208ENST00000588410 MAP3K4Q9Y6R4 1608 aa32.02■■■□□ 2.72
TPM4-208ENST00000588410 CD109Q6YHK3 1445 aa32.01■■■□□ 2.72
TPM4-208ENST00000588410 AEBP2Q6ZN18 517 aaPredicted RBP32.01■■■□□ 2.71
TPM4-208ENST00000588410 NUP153P49790 1475 aaKnown RBP31.98■■■□□ 2.71
TPM4-208ENST00000588410 PPRC1Q5VV67 1664 aaKnown RBP31.98■■■□□ 2.71
TPM4-208ENST00000588410 MAGI3Q5TCQ9 1506 aa31.91■■■□□ 2.7
TPM4-208ENST00000588410 PLEKHD1A6NEE1 506 aa31.91■■■□□ 2.7
TPM4-208ENST00000588410 ARHGAP35Q9NRY4 1499 aa31.89■■■□□ 2.7
TPM4-208ENST00000588410 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
TPM4-208ENST00000588410 FMN1Q68DA7 1419 aa31.88■■■□□ 2.69
TPM4-208ENST00000588410 CFAP43Q8NDM7 1665 aa31.87■■■□□ 2.69
TPM4-208ENST00000588410 COL17A1Q9UMD9 1497 aaPredicted RBP31.85■■■□□ 2.69
TPM4-208ENST00000588410 ABCA9Q8IUA7 1624 aa31.75■■■□□ 2.67
TPM4-208ENST00000588410 CDK13Q14004 1512 aaKnown RBP31.71■■■□□ 2.67
TPM4-208ENST00000588410 PHLDB1Q86UU1 1377 aa31.7■■■□□ 2.67
TPM4-208ENST00000588410 CDK11AQ9UQ88 783 aaPredicted RBP31.7■■■□□ 2.67
TPM4-208ENST00000588410 HECW1Q76N89 1606 aa31.69■■■□□ 2.66
TPM4-208ENST00000588410 CLIP1P30622 1438 aa31.64■■■□□ 2.66
TPM4-208ENST00000588410 ARAP3Q8WWN8 1544 aa31.64■■■□□ 2.66
TPM4-208ENST00000588410 NEO1Q92859 1461 aa31.63■■■□□ 2.65
TPM4-208ENST00000588410 KDM4FA0A1W2PPD8 638 aa31.62■■■□□ 2.65
TPM4-208ENST00000588410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.57■■■□□ 2.642e-6■■□□□ 13.7
TPM4-208ENST00000588410 CASKIN1Q8WXD9 1431 aa31.56■■■□□ 2.64
TPM4-208ENST00000588410 RAPGEF3O95398 923 aa31.55■■■□□ 2.64
TPM4-208ENST00000588410 FANCAO15360 1455 aa31.51■■■□□ 2.63
TPM4-208ENST00000588410 TROQ12816 1431 aaPredicted RBP31.49■■■□□ 2.63
TPM4-208ENST00000588410 TTC37Q6PGP7 1564 aa31.49■■■□□ 2.63
TPM4-208ENST00000588410 AKNAQ7Z591 1439 aa31.49■■■□□ 2.63
TPM4-208ENST00000588410 CCDC18Q5T9S5 1454 aa31.48■■■□□ 2.63
TPM4-208ENST00000588410 PCF11O94913 1555 aaKnown RBP31.47■■■□□ 2.63
TPM4-208ENST00000588410 ADGRL1O94910 1474 aa31.47■■■□□ 2.63
TPM4-208ENST00000588410 PLCH2O75038 1416 aa31.45■■■□□ 2.63
TPM4-208ENST00000588410 DENND4BO75064 1496 aaPredicted RBP31.44■■■□□ 2.62
TPM4-208ENST00000588410 FYCO1Q9BQS8 1478 aa31.44■■■□□ 2.62
TPM4-208ENST00000588410 EFCAB2Q5VUJ9 269 aa31.42■■■□□ 2.62
TPM4-208ENST00000588410 CFAP74Q9C0B2 1584 aa31.42■■■□□ 2.62
TPM4-208ENST00000588410 KIF14Q15058 1648 aa31.4■■■□□ 2.62
TPM4-208ENST00000588410 CEP162Q5TB80 1403 aa31.38■■■□□ 2.61
TPM4-208ENST00000588410 LOC105371045A0A1W2PR82 267 aa31.33■■■□□ 2.61
TPM4-208ENST00000588410 SCAPERQ9BY12 1400 aa31.32■■■□□ 2.61
TPM4-208ENST00000588410 FRMPD1Q5SYB0 1578 aa31.32■■■□□ 2.6
TPM4-208ENST00000588410 LRRIQ1Q96JM4 1722 aa31.32■■■□□ 2.6
TPM4-208ENST00000588410 ARHGAP5Q13017 1502 aa31.28■■■□□ 2.6
TPM4-208ENST00000588410 ARID4BQ4LE39 1312 aaPredicted RBP31.27■■■□□ 2.6
TPM4-208ENST00000588410 MYO5CQ9NQX4 1742 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms