RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
GPATCH8-205ENST00000587228 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
GPATCH8-205ENST00000587228 NPHP1O15259 732 aa12.69□□□□□ -0.38
GPATCH8-205ENST00000587228 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
GPATCH8-205ENST00000587228 PTPRGP23470 1445 aa12.67□□□□□ -0.38
GPATCH8-205ENST00000587228 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
GPATCH8-205ENST00000587228 NBR1Q14596 966 aa12.65□□□□□ -0.38
GPATCH8-205ENST00000587228 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
GPATCH8-205ENST00000587228 ROCK2O75116 1388 aaKnown RBP12.64□□□□□ -0.39
GPATCH8-205ENST00000587228 RSPH4AQ5TD94 716 aa12.64□□□□□ -0.39
GPATCH8-205ENST00000587228 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
GPATCH8-205ENST00000587228 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
GPATCH8-205ENST00000587228 RGS3P49796 1198 aa12.62□□□□□ -0.39
GPATCH8-205ENST00000587228 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
GPATCH8-205ENST00000587228 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
GPATCH8-205ENST00000587228 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
GPATCH8-205ENST00000587228 CSB-PGBD3P0DP91 1061 aa12.61□□□□□ -0.39
GPATCH8-205ENST00000587228 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
GPATCH8-205ENST00000587228 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
GPATCH8-205ENST00000587228 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
GPATCH8-205ENST00000587228 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
GPATCH8-205ENST00000587228 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
GPATCH8-205ENST00000587228 TRAK1Q9UPV9 953 aa12.59□□□□□ -0.39
GPATCH8-205ENST00000587228 GAPVD1Q14C86 1478 aa12.58□□□□□ -0.4
GPATCH8-205ENST00000587228 IGF1RP08069 1367 aa12.57□□□□□ -0.4
GPATCH8-205ENST00000587228 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
GPATCH8-205ENST00000587228 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
GPATCH8-205ENST00000587228 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
GPATCH8-205ENST00000587228 FAM69CQ0P6D2 419 aa12.55□□□□□ -0.4
GPATCH8-205ENST00000587228 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
GPATCH8-205ENST00000587228 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
GPATCH8-205ENST00000587228 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
GPATCH8-205ENST00000587228 BECN1Q14457 450 aa12.54□□□□□ -0.4
GPATCH8-205ENST00000587228 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
GPATCH8-205ENST00000587228 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
GPATCH8-205ENST00000587228 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
GPATCH8-205ENST00000587228 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
GPATCH8-205ENST00000587228 MS4A1P11836 297 aa12.52□□□□□ -0.4
GPATCH8-205ENST00000587228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.4
GPATCH8-205ENST00000587228 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
GPATCH8-205ENST00000587228 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
GPATCH8-205ENST00000587228 CHMP4BQ9H444 224 aaKnown RBP12.51□□□□□ -0.41
GPATCH8-205ENST00000587228 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
GPATCH8-205ENST00000587228 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
GPATCH8-205ENST00000587228 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
GPATCH8-205ENST00000587228 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
GPATCH8-205ENST00000587228 APBB1O00213 710 aa12.49□□□□□ -0.41
GPATCH8-205ENST00000587228 EIF3AQ14152 1382 aaKnown RBP12.49□□□□□ -0.41
GPATCH8-205ENST00000587228 CCER2I3L3R5 266 aa12.49□□□□□ -0.41
GPATCH8-205ENST00000587228 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
GPATCH8-205ENST00000587228 KCNJ4P48050 445 aa12.48□□□□□ -0.41
GPATCH8-205ENST00000587228 AMPHP49418 695 aa12.47□□□□□ -0.41
GPATCH8-205ENST00000587228 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
GPATCH8-205ENST00000587228 FGD1P98174 961 aa12.47□□□□□ -0.41
GPATCH8-205ENST00000587228 RALBP1Q15311 655 aa12.47□□□□□ -0.41
GPATCH8-205ENST00000587228 DDRGK1Q96HY6 314 aa12.47□□□□□ -0.41
GPATCH8-205ENST00000587228 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
GPATCH8-205ENST00000587228 NESP48681 1621 aa12.46□□□□□ -0.41
GPATCH8-205ENST00000587228 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
GPATCH8-205ENST00000587228 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
GPATCH8-205ENST00000587228 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
GPATCH8-205ENST00000587228 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
GPATCH8-205ENST00000587228 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
GPATCH8-205ENST00000587228 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
GPATCH8-205ENST00000587228 AFAP1Q8N556 730 aa12.42□□□□□ -0.42
GPATCH8-205ENST00000587228 EIF5BO60841 1220 aaKnown RBP12.42□□□□□ -0.42
GPATCH8-205ENST00000587228 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
GPATCH8-205ENST00000587228 PANK3Q9H999 370 aa12.42□□□□□ -0.42
GPATCH8-205ENST00000587228 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
GPATCH8-205ENST00000587228 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
GPATCH8-205ENST00000587228 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
GPATCH8-205ENST00000587228 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
GPATCH8-205ENST00000587228 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.42
GPATCH8-205ENST00000587228 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
GPATCH8-205ENST00000587228 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
GPATCH8-205ENST00000587228 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
GPATCH8-205ENST00000587228 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
GPATCH8-205ENST00000587228 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
GPATCH8-205ENST00000587228 MYOM3Q5VTT5 1437 aa12.37□□□□□ -0.43
GPATCH8-205ENST00000587228 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
GPATCH8-205ENST00000587228 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
GPATCH8-205ENST00000587228 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
GPATCH8-205ENST00000587228 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 HSP90AB1P08238 724 aaKnown RBP12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 COG3Q96JB2 828 aa12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
GPATCH8-205ENST00000587228 ISY1Q9ULR0 285 aaKnown RBP12.35□□□□□ -0.43
GPATCH8-205ENST00000587228 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
GPATCH8-205ENST00000587228 CFTRP13569 1480 aa12.34□□□□□ -0.43
GPATCH8-205ENST00000587228 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
GPATCH8-205ENST00000587228 PHLDB1Q86UU1 1377 aa12.33□□□□□ -0.44
GPATCH8-205ENST00000587228 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
GPATCH8-205ENST00000587228 USP47Q96K76 1375 aa12.33□□□□□ -0.44
GPATCH8-205ENST00000587228 EVA1CP58658 441 aa12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 CGNL1Q0VF96 1302 aa12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms