RNA–Protein interactions for RNA: ENST00000586904.1

NCLN-202, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 836 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-202ENST00000586904 CFAP74Q9C0B2 1584 aa26.5■■□□□ 1.83
NCLN-202ENST00000586904 GPATCH8Q9UKJ3 1502 aaKnown RBP26.48■■□□□ 1.83
NCLN-202ENST00000586904 NCOA2Q15596 1464 aa26.47■■□□□ 1.83
NCLN-202ENST00000586904 AKNAQ7Z591 1439 aa26.46■■□□□ 1.83
NCLN-202ENST00000586904 ARHGAP5Q13017 1502 aa26.45■■□□□ 1.83
NCLN-202ENST00000586904 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.82
NCLN-202ENST00000586904 CCNB3Q8WWL7 1395 aa26.44■■□□□ 1.82
NCLN-202ENST00000586904 ITSN2Q9NZM3 1697 aa26.4■■□□□ 1.82
NCLN-202ENST00000586904 ADGRL1O94910 1474 aa26.37■■□□□ 1.81
NCLN-202ENST00000586904 DENND4BO75064 1496 aaPredicted RBP26.35■■□□□ 1.81
NCLN-202ENST00000586904 RICTORQ6R327 1708 aa26.34■■□□□ 1.81
NCLN-202ENST00000586904 FRMPD1Q5SYB0 1578 aa26.34■■□□□ 1.81
NCLN-202ENST00000586904 SCAPERQ9BY12 1400 aa26.34■■□□□ 1.81
NCLN-202ENST00000586904 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
NCLN-202ENST00000586904 SAMD9LQ8IVG5 1584 aa26.33■■□□□ 1.81
NCLN-202ENST00000586904 RAPGEF3O95398 923 aa26.32■■□□□ 1.8
NCLN-202ENST00000586904 ABCC1P33527 1531 aa26.32■■□□□ 1.8
NCLN-202ENST00000586904 ZNF777Q9ULD5 760 aaPredicted RBP26.29■■□□□ 1.8
NCLN-202ENST00000586904 ARHGEF12Q9NZN5 1544 aa26.29■■□□□ 1.8
NCLN-202ENST00000586904 POGZQ7Z3K3 1410 aa26.28■■□□□ 1.8
NCLN-202ENST00000586904 MYOM3Q5VTT5 1437 aa26.27■■□□□ 1.8
NCLN-202ENST00000586904 PLEKHH2Q8IVE3 1493 aa26.25■■□□□ 1.79
NCLN-202ENST00000586904 KIAA1107Q9UPP5 1409 aa26.25■■□□□ 1.79
NCLN-202ENST00000586904 ZMYM4Q5VZL5 1548 aa26.24■■□□□ 1.79
NCLN-202ENST00000586904 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
NCLN-202ENST00000586904 SYCP2Q9BX26 1530 aa26.23■■□□□ 1.79
NCLN-202ENST00000586904 MIA2Q96PC5 1412 aa26.22■■□□□ 1.79
NCLN-202ENST00000586904 ZNF518AQ6AHZ1 1483 aa26.22■■□□□ 1.79
NCLN-202ENST00000586904 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
NCLN-202ENST00000586904 KDM5CP41229 1560 aa26.21■■□□□ 1.79
NCLN-202ENST00000586904 CAMSAP2Q08AD1 1489 aa26.2■■□□□ 1.78
NCLN-202ENST00000586904 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
NCLN-202ENST00000586904 AFAP1Q8N556 730 aa26.18■■□□□ 1.78
NCLN-202ENST00000586904 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
NCLN-202ENST00000586904 PPARGC1BQ86YN6 1023 aaKnown RBP26.16■■□□□ 1.78
NCLN-202ENST00000586904 MAGI2Q86UL8 1455 aa26.16■■□□□ 1.78
NCLN-202ENST00000586904 FGD6Q6ZV73 1430 aa26.14■■□□□ 1.78
NCLN-202ENST00000586904 PTPN23Q9H3S7 1636 aa26.13■■□□□ 1.77
NCLN-202ENST00000586904 ARHGEF40Q8TER5 1519 aa26.13■■□□□ 1.77
NCLN-202ENST00000586904 HECW2Q9P2P5 1572 aa26.12■■□□□ 1.77
NCLN-202ENST00000586904 ZFYVE16Q7Z3T8 1539 aa26.12■■□□□ 1.77
NCLN-202ENST00000586904 MLH3Q9UHC1 1453 aa26.11■■□□□ 1.77
NCLN-202ENST00000586904 YEATS2Q9ULM3 1422 aa26.11■■□□□ 1.77
NCLN-202ENST00000586904 ARHGEF5Q12774 1597 aa26.1■■□□□ 1.77
NCLN-202ENST00000586904 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
NCLN-202ENST00000586904 KIDINS220Q9ULH0 1771 aa26.08■■□□□ 1.77
NCLN-202ENST00000586904 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
NCLN-202ENST00000586904 RSPH4AQ5TD94 716 aa26.07■■□□□ 1.76
NCLN-202ENST00000586904 INO80Q9ULG1 1556 aaPredicted RBP26.04■■□□□ 1.76
NCLN-202ENST00000586904 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
NCLN-202ENST00000586904 DIP2CQ9Y2E4 1556 aa26.03■■□□□ 1.76
NCLN-202ENST00000586904 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
NCLN-202ENST00000586904 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
NCLN-202ENST00000586904 ATP10AO60312 1499 aa26.01■■□□□ 1.75
NCLN-202ENST00000586904 MYT1LQ9UL68 1186 aa26■■□□□ 1.75
NCLN-202ENST00000586904 RTEL1-TNFRSF6BF6WH68 1400 aa25.99■■□□□ 1.75
NCLN-202ENST00000586904 DNMT1P26358 1616 aaKnown RBP25.98■■□□□ 1.75
NCLN-202ENST00000586904 C9orf84Q5VXU9 1444 aa25.97■■□□□ 1.75
NCLN-202ENST00000586904 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
NCLN-202ENST00000586904 REREQ9P2R6 1566 aa25.96■■□□□ 1.75
NCLN-202ENST00000586904 MAST1Q9Y2H9 1570 aa25.96■■□□□ 1.75
NCLN-202ENST00000586904 ABCC5O15440 1437 aa25.96■■□□□ 1.75
NCLN-202ENST00000586904 CROCC2H7BZ55 1655 aa25.95■■□□□ 1.74
NCLN-202ENST00000586904 TSPY4P0CV99 314 aa25.94■■□□□ 1.74
NCLN-202ENST00000586904 TSPY10P0CW01 314 aa25.94■■□□□ 1.74
NCLN-202ENST00000586904 DAPK1P53355 1430 aa25.94■■□□□ 1.74
NCLN-202ENST00000586904 FAM50AQ14320 339 aaKnown RBP25.93■■□□□ 1.74
NCLN-202ENST00000586904 RRBP1Q9P2E9 1410 aaKnown RBP25.92■■□□□ 1.74
NCLN-202ENST00000586904 SHANK2Q9UPX8 1470 aa25.91■■□□□ 1.74
NCLN-202ENST00000586904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.91■■□□□ 1.74
NCLN-202ENST00000586904 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
NCLN-202ENST00000586904 BCORL1Q5H9F3 1711 aa25.87■■□□□ 1.73
NCLN-202ENST00000586904 AGLP35573 1532 aa25.87■■□□□ 1.73
NCLN-202ENST00000586904 ARID4BQ4LE39 1312 aaPredicted RBP25.87■■□□□ 1.73
NCLN-202ENST00000586904 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
NCLN-202ENST00000586904 A2MP01023 1474 aa25.86■■□□□ 1.73
NCLN-202ENST00000586904 KDM4FA0A1W2PPD8 638 aa25.84■■□□□ 1.73
NCLN-202ENST00000586904 ADAMTSL3P82987 1691 aa25.82■■□□□ 1.72
NCLN-202ENST00000586904 DHX29Q7Z478 1369 aaKnown RBP25.81■■□□□ 1.72
NCLN-202ENST00000586904 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
NCLN-202ENST00000586904 ADGRL2O95490 1459 aa25.79■■□□□ 1.72
NCLN-202ENST00000586904 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
NCLN-202ENST00000586904 NCOA1Q15788 1441 aa25.76■■□□□ 1.71
NCLN-202ENST00000586904 ANKRD30AQ9BXX3 1397 aa25.75■■□□□ 1.71
NCLN-202ENST00000586904 DUOX2Q9NRD8 1548 aa25.74■■□□□ 1.71
NCLN-202ENST00000586904 KIF15Q9NS87 1388 aa25.74■■□□□ 1.71
NCLN-202ENST00000586904 MLECQ14165 292 aa25.74■■□□□ 1.71
NCLN-202ENST00000586904 MADDQ8WXG6 1647 aa25.74■■□□□ 1.71
NCLN-202ENST00000586904 RRP7BPQ9NSQ0 103 aa25.72■■□□□ 1.71
NCLN-202ENST00000586904 FER1L4A9Z1Z3 1794 aa25.7■■□□□ 1.7
NCLN-202ENST00000586904 ITGAEP38570 1179 aa25.7■■□□□ 1.7
NCLN-202ENST00000586904 EIF2AK4Q9P2K8 1649 aaKnown RBP25.7■■□□□ 1.7
NCLN-202ENST00000586904 ROCK1Q13464 1354 aa25.69■■□□□ 1.7
NCLN-202ENST00000586904 KIF3BO15066 747 aa25.67■■□□□ 1.7
NCLN-202ENST00000586904 ERBINQ96RT1 1412 aa25.67■■□□□ 1.7
NCLN-202ENST00000586904 RIMS1Q86UR5 1692 aaKnown RBP25.67■■□□□ 1.7
NCLN-202ENST00000586904 RNF17Q9BXT8 1623 aaKnown RBP25.63■■□□□ 1.69
NCLN-202ENST00000586904 GGT6Q6P531 493 aa25.63■■□□□ 1.69
NCLN-202ENST00000586904 PTPRMP28827 1452 aa25.62■■□□□ 1.69
NCLN-202ENST00000586904 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms