RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
DNMT1-208ENST00000586667 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
DNMT1-208ENST00000586667 FGD6Q6ZV73 1430 aa19.59■□□□□ 0.73
DNMT1-208ENST00000586667 CFAP74Q9C0B2 1584 aa19.58■□□□□ 0.73
DNMT1-208ENST00000586667 FANCAO15360 1455 aa19.58■□□□□ 0.72
DNMT1-208ENST00000586667 ABCC1P33527 1531 aa19.57■□□□□ 0.72
DNMT1-208ENST00000586667 MIA2Q96PC5 1412 aa19.56■□□□□ 0.72
DNMT1-208ENST00000586667 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
DNMT1-208ENST00000586667 NEO1Q92859 1461 aa19.55■□□□□ 0.72
DNMT1-208ENST00000586667 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
DNMT1-208ENST00000586667 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
DNMT1-208ENST00000586667 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
DNMT1-208ENST00000586667 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
DNMT1-208ENST00000586667 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-208ENST00000586667 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
DNMT1-208ENST00000586667 ARHGEF12Q9NZN5 1544 aa19.51■□□□□ 0.71
DNMT1-208ENST00000586667 FRMPD1Q5SYB0 1578 aa19.5■□□□□ 0.71
DNMT1-208ENST00000586667 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
DNMT1-208ENST00000586667 ADGRL1O94910 1474 aa19.48■□□□□ 0.71
DNMT1-208ENST00000586667 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
DNMT1-208ENST00000586667 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
DNMT1-208ENST00000586667 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
DNMT1-208ENST00000586667 COL17A1Q9UMD9 1497 aaPredicted RBP19.47■□□□□ 0.71
DNMT1-208ENST00000586667 RICTORQ6R327 1708 aa19.46■□□□□ 0.71
DNMT1-208ENST00000586667 ARHGEF5Q12774 1597 aa19.46■□□□□ 0.71
DNMT1-208ENST00000586667 KIAA1107Q9UPP5 1409 aa19.46■□□□□ 0.71
DNMT1-208ENST00000586667 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
DNMT1-208ENST00000586667 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
DNMT1-208ENST00000586667 DNMT1P26358 1616 aaKnown RBP19.44■□□□□ 0.7
DNMT1-208ENST00000586667 POGZQ7Z3K3 1410 aa19.44■□□□□ 0.7
DNMT1-208ENST00000586667 CROCC2H7BZ55 1655 aa19.44■□□□□ 0.7
DNMT1-208ENST00000586667 KDM5CP41229 1560 aa19.44■□□□□ 0.7
DNMT1-208ENST00000586667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.7
DNMT1-208ENST00000586667 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
DNMT1-208ENST00000586667 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
DNMT1-208ENST00000586667 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
DNMT1-208ENST00000586667 ZMYM4Q5VZL5 1548 aa19.4■□□□□ 0.7
DNMT1-208ENST00000586667 ZNF777Q9ULD5 760 aaPredicted RBP19.39■□□□□ 0.69
DNMT1-208ENST00000586667 INO80Q9ULG1 1556 aaPredicted RBP19.39■□□□□ 0.69
DNMT1-208ENST00000586667 KDM6BO15054 1643 aa19.39■□□□□ 0.69
DNMT1-208ENST00000586667 DENND4BO75064 1496 aaPredicted RBP19.38■□□□□ 0.69
DNMT1-208ENST00000586667 ZFYVE16Q7Z3T8 1539 aa19.37■□□□□ 0.69
DNMT1-208ENST00000586667 ZNF518AQ6AHZ1 1483 aa19.37■□□□□ 0.69
DNMT1-208ENST00000586667 SHANK2Q9UPX8 1470 aa19.37■□□□□ 0.69
DNMT1-208ENST00000586667 ABCC5O15440 1437 aa19.37■□□□□ 0.69
DNMT1-208ENST00000586667 MAST1Q9Y2H9 1570 aa19.36■□□□□ 0.69
DNMT1-208ENST00000586667 DAPK1P53355 1430 aa19.36■□□□□ 0.69
DNMT1-208ENST00000586667 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
DNMT1-208ENST00000586667 HECW2Q9P2P5 1572 aa19.34■□□□□ 0.69
DNMT1-208ENST00000586667 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.68
DNMT1-208ENST00000586667 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
DNMT1-208ENST00000586667 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
DNMT1-208ENST00000586667 ATP7AQ04656 1500 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 MLH3Q9UHC1 1453 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 ABCA6Q8N139 1617 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 RAPGEF3O95398 923 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
DNMT1-208ENST00000586667 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
DNMT1-208ENST00000586667 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
DNMT1-208ENST00000586667 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.68
DNMT1-208ENST00000586667 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
DNMT1-208ENST00000586667 MAGI2Q86UL8 1455 aa19.25■□□□□ 0.67
DNMT1-208ENST00000586667 RTEL1-TNFRSF6BF6WH68 1400 aa19.25■□□□□ 0.67
DNMT1-208ENST00000586667 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
DNMT1-208ENST00000586667 RSPH4AQ5TD94 716 aa19.22■□□□□ 0.67
DNMT1-208ENST00000586667 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
DNMT1-208ENST00000586667 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
DNMT1-208ENST00000586667 ROCK1Q13464 1354 aa19.2■□□□□ 0.66
DNMT1-208ENST00000586667 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
DNMT1-208ENST00000586667 NCOA1Q15788 1441 aa19.2■□□□□ 0.66
DNMT1-208ENST00000586667 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
DNMT1-208ENST00000586667 ITGAEP38570 1179 aa19.15■□□□□ 0.66
DNMT1-208ENST00000586667 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
DNMT1-208ENST00000586667 BCORL1Q5H9F3 1711 aa19.14■□□□□ 0.66
DNMT1-208ENST00000586667 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.65
DNMT1-208ENST00000586667 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
DNMT1-208ENST00000586667 NAIPQ13075 1403 aa19.14■□□□□ 0.65
DNMT1-208ENST00000586667 DUOX2Q9NRD8 1548 aa19.14■□□□□ 0.65
DNMT1-208ENST00000586667 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
DNMT1-208ENST00000586667 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
DNMT1-208ENST00000586667 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
DNMT1-208ENST00000586667 ATP10AO60312 1499 aa19.13■□□□□ 0.65
DNMT1-208ENST00000586667 A2MP01023 1474 aa19.13■□□□□ 0.65
DNMT1-208ENST00000586667 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
DNMT1-208ENST00000586667 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
DNMT1-208ENST00000586667 AGLP35573 1532 aa19.1■□□□□ 0.65
DNMT1-208ENST00000586667 DEPDC5O75140 1603 aa19.08■□□□□ 0.65
DNMT1-208ENST00000586667 MROH1Q8NDA8 1641 aa19.08■□□□□ 0.65
DNMT1-208ENST00000586667 RNF17Q9BXT8 1623 aaKnown RBP19.08■□□□□ 0.65
DNMT1-208ENST00000586667 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
DNMT1-208ENST00000586667 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
DNMT1-208ENST00000586667 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
DNMT1-208ENST00000586667 UNC13BO14795 1591 aa19.05■□□□□ 0.64
DNMT1-208ENST00000586667 PRDM15P57071 1507 aaPredicted RBP19.04■□□□□ 0.64
DNMT1-208ENST00000586667 MYT1LQ9UL68 1186 aa19■□□□□ 0.63
DNMT1-208ENST00000586667 VWDEQ8N2E2 1590 aa19■□□□□ 0.63
DNMT1-208ENST00000586667 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms