RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
SAFB2-202ENST00000585449 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
SAFB2-202ENST00000585449 MTUS2Q5JR59 1369 aa16.98■□□□□ 0.31
SAFB2-202ENST00000585449 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
SAFB2-202ENST00000585449 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
SAFB2-202ENST00000585449 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
SAFB2-202ENST00000585449 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
SAFB2-202ENST00000585449 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
SAFB2-202ENST00000585449 MYT1LQ9UL68 1186 aa16.93■□□□□ 0.3
SAFB2-202ENST00000585449 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
SAFB2-202ENST00000585449 PREX2Q70Z35 1606 aa16.92■□□□□ 0.3
SAFB2-202ENST00000585449 ZMYM4Q5VZL5 1548 aa16.92■□□□□ 0.3
SAFB2-202ENST00000585449 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
SAFB2-202ENST00000585449 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
SAFB2-202ENST00000585449 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
SAFB2-202ENST00000585449 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
SAFB2-202ENST00000585449 ZNF518AQ6AHZ1 1483 aa16.89■□□□□ 0.29
SAFB2-202ENST00000585449 MLECQ14165 292 aa16.89■□□□□ 0.29
SAFB2-202ENST00000585449 ZNF644Q9H582 1327 aaPredicted RBP16.87■□□□□ 0.29
SAFB2-202ENST00000585449 ATP10AO60312 1499 aa16.86■□□□□ 0.29
SAFB2-202ENST00000585449 ABCC1P33527 1531 aa16.86■□□□□ 0.29
SAFB2-202ENST00000585449 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
SAFB2-202ENST00000585449 KANK4Q5T7N3 995 aaPredicted RBP16.86■□□□□ 0.29
SAFB2-202ENST00000585449 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
SAFB2-202ENST00000585449 SIGLEC1Q9BZZ2 1709 aa16.85■□□□□ 0.29
SAFB2-202ENST00000585449 KDM5CP41229 1560 aa16.85■□□□□ 0.29
SAFB2-202ENST00000585449 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
SAFB2-202ENST00000585449 BCORL1Q5H9F3 1711 aa16.84■□□□□ 0.29
SAFB2-202ENST00000585449 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
SAFB2-202ENST00000585449 ITSN2Q9NZM3 1697 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 PTPRMP28827 1452 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
SAFB2-202ENST00000585449 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
SAFB2-202ENST00000585449 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
SAFB2-202ENST00000585449 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
SAFB2-202ENST00000585449 SPAG9O60271 1321 aaKnown RBP16.8■□□□□ 0.28
SAFB2-202ENST00000585449 HECW2Q9P2P5 1572 aa16.8■□□□□ 0.28
SAFB2-202ENST00000585449 MADDQ8WXG6 1647 aa16.79■□□□□ 0.28
SAFB2-202ENST00000585449 APLP2Q06481 763 aa16.78■□□□□ 0.28
SAFB2-202ENST00000585449 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
SAFB2-202ENST00000585449 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
SAFB2-202ENST00000585449 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
SAFB2-202ENST00000585449 MAP3K1Q13233 1512 aa16.76■□□□□ 0.27
SAFB2-202ENST00000585449 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
SAFB2-202ENST00000585449 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
SAFB2-202ENST00000585449 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
SAFB2-202ENST00000585449 RIMS1Q86UR5 1692 aaKnown RBP16.74■□□□□ 0.27
SAFB2-202ENST00000585449 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
SAFB2-202ENST00000585449 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
SAFB2-202ENST00000585449 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
SAFB2-202ENST00000585449 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
SAFB2-202ENST00000585449 RSPH4AQ5TD94 716 aa16.69■□□□□ 0.26
SAFB2-202ENST00000585449 AGLP35573 1532 aa16.68■□□□□ 0.26
SAFB2-202ENST00000585449 FER1L4A9Z1Z3 1794 aa16.67■□□□□ 0.26
SAFB2-202ENST00000585449 MYOM3Q5VTT5 1437 aa16.66■□□□□ 0.26
SAFB2-202ENST00000585449 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
SAFB2-202ENST00000585449 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
SAFB2-202ENST00000585449 A2MP01023 1474 aa16.66■□□□□ 0.26
SAFB2-202ENST00000585449 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
SAFB2-202ENST00000585449 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
SAFB2-202ENST00000585449 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
SAFB2-202ENST00000585449 GGT6Q6P531 493 aa16.65■□□□□ 0.26
SAFB2-202ENST00000585449 CCDC141Q6ZP82 1450 aa16.65■□□□□ 0.26
SAFB2-202ENST00000585449 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
SAFB2-202ENST00000585449 HSPA2P54652 639 aa16.62■□□□□ 0.25
SAFB2-202ENST00000585449 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
SAFB2-202ENST00000585449 LMTK3Q96Q04 1460 aa16.61■□□□□ 0.25
SAFB2-202ENST00000585449 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
SAFB2-202ENST00000585449 KIF3BO15066 747 aa16.59■□□□□ 0.25
SAFB2-202ENST00000585449 PLXNC1O60486 1568 aa16.59■□□□□ 0.25
SAFB2-202ENST00000585449 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
SAFB2-202ENST00000585449 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
SAFB2-202ENST00000585449 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
SAFB2-202ENST00000585449 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
SAFB2-202ENST00000585449 FGD6Q6ZV73 1430 aa16.54■□□□□ 0.24
SAFB2-202ENST00000585449 ABCC5O15440 1437 aa16.53■□□□□ 0.24
SAFB2-202ENST00000585449 C3P01024 1663 aa16.53■□□□□ 0.24
SAFB2-202ENST00000585449 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
SAFB2-202ENST00000585449 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
SAFB2-202ENST00000585449 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
SAFB2-202ENST00000585449 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
SAFB2-202ENST00000585449 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
SAFB2-202ENST00000585449 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
SAFB2-202ENST00000585449 CLTCQ00610 1675 aaKnown RBP16.5■□□□□ 0.23
SAFB2-202ENST00000585449 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
SAFB2-202ENST00000585449 DAPK1P53355 1430 aa16.49■□□□□ 0.23
SAFB2-202ENST00000585449 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
SAFB2-202ENST00000585449 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
SAFB2-202ENST00000585449 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
SAFB2-202ENST00000585449 PREX1Q8TCU6 1659 aa16.47■□□□□ 0.23
SAFB2-202ENST00000585449 FBXO31Q5XUX0 539 aaPredicted RBP16.46■□□□□ 0.23
SAFB2-202ENST00000585449 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms