RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
SAFB2-202ENST00000585449 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.29
SAFB2-202ENST00000585449 ABCC9O60706 1549 aa22.98■■□□□ 1.27
SAFB2-202ENST00000585449 DCAF8L2P0C7V8 631 aa22.03■■□□□ 1.12
SAFB2-202ENST00000585449 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
SAFB2-202ENST00000585449 NACADO15069 1562 aa21.86■■□□□ 1.09
SAFB2-202ENST00000585449 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
SAFB2-202ENST00000585449 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
SAFB2-202ENST00000585449 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
SAFB2-202ENST00000585449 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
SAFB2-202ENST00000585449 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
SAFB2-202ENST00000585449 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
SAFB2-202ENST00000585449 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
SAFB2-202ENST00000585449 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
SAFB2-202ENST00000585449 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
SAFB2-202ENST00000585449 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
SAFB2-202ENST00000585449 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
SAFB2-202ENST00000585449 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
SAFB2-202ENST00000585449 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
SAFB2-202ENST00000585449 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
SAFB2-202ENST00000585449 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
SAFB2-202ENST00000585449 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
SAFB2-202ENST00000585449 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
SAFB2-202ENST00000585449 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
SAFB2-202ENST00000585449 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
SAFB2-202ENST00000585449 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.8
SAFB2-202ENST00000585449 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
SAFB2-202ENST00000585449 WIZO95785 1651 aa19.89■□□□□ 0.77
SAFB2-202ENST00000585449 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
SAFB2-202ENST00000585449 NESP48681 1621 aa19.84■□□□□ 0.77
SAFB2-202ENST00000585449 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
SAFB2-202ENST00000585449 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
SAFB2-202ENST00000585449 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
SAFB2-202ENST00000585449 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
SAFB2-202ENST00000585449 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
SAFB2-202ENST00000585449 CUX2O14529 1486 aa19.57■□□□□ 0.72
SAFB2-202ENST00000585449 KIF21AQ7Z4S6 1674 aa19.51■□□□□ 0.71
SAFB2-202ENST00000585449 THOC2Q8NI27 1593 aaKnown RBP19.47■□□□□ 0.71
SAFB2-202ENST00000585449 CFTRP13569 1480 aa19.47■□□□□ 0.71
SAFB2-202ENST00000585449 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
SAFB2-202ENST00000585449 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
SAFB2-202ENST00000585449 MRC2Q9UBG0 1479 aa19.37■□□□□ 0.69
SAFB2-202ENST00000585449 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
SAFB2-202ENST00000585449 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.68
SAFB2-202ENST00000585449 WDR62O43379 1518 aa19.3■□□□□ 0.68
SAFB2-202ENST00000585449 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
SAFB2-202ENST00000585449 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
SAFB2-202ENST00000585449 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
SAFB2-202ENST00000585449 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
SAFB2-202ENST00000585449 ABCC8Q09428 1581 aa19.02■□□□□ 0.63
SAFB2-202ENST00000585449 DNMBPQ6XZF7 1577 aa18.99■□□□□ 0.63
SAFB2-202ENST00000585449 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
SAFB2-202ENST00000585449 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
SAFB2-202ENST00000585449 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
SAFB2-202ENST00000585449 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
SAFB2-202ENST00000585449 CUX1P39880 1505 aa18.87■□□□□ 0.61
SAFB2-202ENST00000585449 SOGA1O94964 1423 aa18.86■□□□□ 0.61
SAFB2-202ENST00000585449 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.613e-7■■■■□ 24.3
SAFB2-202ENST00000585449 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
SAFB2-202ENST00000585449 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
SAFB2-202ENST00000585449 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
SAFB2-202ENST00000585449 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
SAFB2-202ENST00000585449 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
SAFB2-202ENST00000585449 FBLN2P98095 1184 aa18.71■□□□□ 0.59
SAFB2-202ENST00000585449 WRNQ14191 1432 aaPredicted RBP eCLIP18.69■□□□□ 0.58
SAFB2-202ENST00000585449 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
SAFB2-202ENST00000585449 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
SAFB2-202ENST00000585449 SNAPC4Q5SXM2 1469 aa18.62■□□□□ 0.57
SAFB2-202ENST00000585449 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
SAFB2-202ENST00000585449 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
SAFB2-202ENST00000585449 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
SAFB2-202ENST00000585449 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
SAFB2-202ENST00000585449 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
SAFB2-202ENST00000585449 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
SAFB2-202ENST00000585449 CHMP7Q8WUX9 453 aaPredicted RBP18.6■□□□□ 0.57
SAFB2-202ENST00000585449 CHD1O14646 1710 aa18.59■□□□□ 0.57
SAFB2-202ENST00000585449 MAGI1Q96QZ7 1491 aaPredicted RBP18.54■□□□□ 0.56
SAFB2-202ENST00000585449 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
SAFB2-202ENST00000585449 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
SAFB2-202ENST00000585449 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
SAFB2-202ENST00000585449 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
SAFB2-202ENST00000585449 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
SAFB2-202ENST00000585449 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
SAFB2-202ENST00000585449 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
SAFB2-202ENST00000585449 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
SAFB2-202ENST00000585449 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.54
SAFB2-202ENST00000585449 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
SAFB2-202ENST00000585449 GRIN2AQ12879 1464 aa18.37■□□□□ 0.53
SAFB2-202ENST00000585449 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
SAFB2-202ENST00000585449 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
SAFB2-202ENST00000585449 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
SAFB2-202ENST00000585449 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
SAFB2-202ENST00000585449 IGF1RP08069 1367 aa18.31■□□□□ 0.52
SAFB2-202ENST00000585449 NUP160Q12769 1436 aa18.3■□□□□ 0.52
SAFB2-202ENST00000585449 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
SAFB2-202ENST00000585449 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
SAFB2-202ENST00000585449 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
SAFB2-202ENST00000585449 CARMIL1Q5VZK9 1371 aa18.18■□□□□ 0.5
SAFB2-202ENST00000585449 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
SAFB2-202ENST00000585449 PRG4Q92954 1404 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms