RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman


Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 TRA2AQ13595 282 aaKnown RBP eCLIP10.45□□□□□ -0.743e-11■■■■■ 53.6
SAFB2-202ENST00000585449 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.87□□□□□ -0.671e-22■■■■■ 52.5
SAFB2-202ENST00000585449 ZNF622Q969S3 477 aaKnown RBP eCLIP13.89□□□□□ -0.193e-15■■■■□ 26
SAFB2-202ENST00000585449 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.613e-7■■■■□ 24.3
SAFB2-202ENST00000585449 SRSF1Q07955 248 aaKnown RBP eCLIP10.03□□□□□ -0.86e-10■■■□□ 17.8
SAFB2-202ENST00000585449 EFTUD2Q15029 972 aaKnown RBP eCLIP10.13□□□□□ -0.798e-8■■■□□ 16.8
SAFB2-202ENST00000585449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.224e-14■■■□□ 16.7
SAFB2-202ENST00000585449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.98□□□□□ -0.977e-8■■■□□ 16.4
SAFB2-202ENST00000585449 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.82□□□□□ -0.842e-21■■□□□ 14.4
SAFB2-202ENST00000585449 CPSF6Q16630 551 aaKnown RBP eCLIP9.98□□□□□ -0.814e-9■■□□□ 13.7
SAFB2-202ENST00000585449 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.453e-10■■□□□ 11.4
SAFB2-202ENST00000585449 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■□□□ 11.4
SAFB2-202ENST00000585449 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.519e-9■□□□□ 10.3
SAFB2-202ENST00000585449 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.22□□□□□ -0.617e-11■□□□□ 10.2
SAFB2-202ENST00000585449 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■□□□□ 10.1
SAFB2-202ENST00000585449 PPIGQ13427 754 aaKnown RBP eCLIP12.22□□□□□ -0.456e-8■□□□□ 9.1
Retrieved 16 of 16 RNA–protein pairs in 5.7 ms