RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PTPRGP23470 1445 aa15.38■□□□□ 0.05
TOP3A-217ENST00000584582 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
TOP3A-217ENST00000584582 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
TOP3A-217ENST00000584582 CC2D1BQ5T0F9 858 aaKnown RBP15.37■□□□□ 0.05
TOP3A-217ENST00000584582 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
TOP3A-217ENST00000584582 C11orf95C9JLR9 678 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-217ENST00000584582 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
TOP3A-217ENST00000584582 ST20-MTHFSA0A0A6YYL1 179 aa15.34■□□□□ 0.05
TOP3A-217ENST00000584582 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.05
TOP3A-217ENST00000584582 IFT140Q96RY7 1462 aa15.33■□□□□ 0.04
TOP3A-217ENST00000584582 CUL7Q14999 1698 aa15.33■□□□□ 0.04
TOP3A-217ENST00000584582 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
TOP3A-217ENST00000584582 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
TOP3A-217ENST00000584582 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
TOP3A-217ENST00000584582 MAP3K1Q13233 1512 aa15.3■□□□□ 0.04
TOP3A-217ENST00000584582 MYT1Q01538 1121 aa15.29■□□□□ 0.04
TOP3A-217ENST00000584582 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
TOP3A-217ENST00000584582 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
TOP3A-217ENST00000584582 EHBP1L1Q8N3D4 1523 aa15.28■□□□□ 0.04
TOP3A-217ENST00000584582 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
TOP3A-217ENST00000584582 KIF7Q2M1P5 1343 aa15.27■□□□□ 0.04
TOP3A-217ENST00000584582 GGT6Q6P531 493 aa15.26■□□□□ 0.03
TOP3A-217ENST00000584582 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
TOP3A-217ENST00000584582 AFAP1Q8N556 730 aa15.25■□□□□ 0.03
TOP3A-217ENST00000584582 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
TOP3A-217ENST00000584582 DAPK1P53355 1430 aa15.25■□□□□ 0.03
TOP3A-217ENST00000584582 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
TOP3A-217ENST00000584582 ANKRD50Q9ULJ7 1429 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
TOP3A-217ENST00000584582 PTPN23Q9H3S7 1636 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 KIF3BO15066 747 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
TOP3A-217ENST00000584582 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 TSHZ2Q9NRE2 1034 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 ABCC5O15440 1437 aa15.24■□□□□ 0.03
TOP3A-217ENST00000584582 USP47Q96K76 1375 aa15.23■□□□□ 0.03
TOP3A-217ENST00000584582 TROQ12816 1431 aaPredicted RBP15.23■□□□□ 0.03
TOP3A-217ENST00000584582 CCDC136Q96JN2 1154 aa15.22■□□□□ 0.03
TOP3A-217ENST00000584582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
TOP3A-217ENST00000584582 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
TOP3A-217ENST00000584582 HECW1Q76N89 1606 aa15.21■□□□□ 0.03
TOP3A-217ENST00000584582 ARHGEF11O15085 1522 aa15.21■□□□□ 0.03
TOP3A-217ENST00000584582 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
TOP3A-217ENST00000584582 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.02
TOP3A-217ENST00000584582 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.02
TOP3A-217ENST00000584582 CCDC7Q96M83 1385 aa15.2■□□□□ 0.02
TOP3A-217ENST00000584582 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
TOP3A-217ENST00000584582 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
TOP3A-217ENST00000584582 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
TOP3A-217ENST00000584582 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
TOP3A-217ENST00000584582 NUP153P49790 1475 aaKnown RBP15.17■□□□□ 0.02
TOP3A-217ENST00000584582 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
TOP3A-217ENST00000584582 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
TOP3A-217ENST00000584582 ANKRD30BQ9BXX2 1392 aa15.15■□□□□ 0.02
TOP3A-217ENST00000584582 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
TOP3A-217ENST00000584582 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
TOP3A-217ENST00000584582 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
TOP3A-217ENST00000584582 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
TOP3A-217ENST00000584582 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
TOP3A-217ENST00000584582 CFAP43Q8NDM7 1665 aa15.13■□□□□ 0.01
TOP3A-217ENST00000584582 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
TOP3A-217ENST00000584582 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
TOP3A-217ENST00000584582 MLECQ14165 292 aa15.12■□□□□ 0.01
TOP3A-217ENST00000584582 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
TOP3A-217ENST00000584582 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
TOP3A-217ENST00000584582 NCOA1Q15788 1441 aa15.11■□□□□ 0.01
TOP3A-217ENST00000584582 TMF1P82094 1093 aa15.11■□□□□ 0.01
TOP3A-217ENST00000584582 PANK3Q9H999 370 aa15.1■□□□□ 0.01
TOP3A-217ENST00000584582 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
TOP3A-217ENST00000584582 DISP1Q96F81 1524 aa15.1■□□□□ 0.01
TOP3A-217ENST00000584582 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
TOP3A-217ENST00000584582 GPATCH8Q9UKJ3 1502 aaKnown RBP15.09■□□□□ 0.01
TOP3A-217ENST00000584582 STK26Q9P289 416 aa15.08■□□□□ 0
TOP3A-217ENST00000584582 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
TOP3A-217ENST00000584582 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
TOP3A-217ENST00000584582 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
TOP3A-217ENST00000584582 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
TOP3A-217ENST00000584582 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
TOP3A-217ENST00000584582 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
TOP3A-217ENST00000584582 ARHGAP5Q13017 1502 aa15.06■□□□□ 0
TOP3A-217ENST00000584582 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
TOP3A-217ENST00000584582 ATP10BO94823 1461 aa15.05■□□□□ 0
TOP3A-217ENST00000584582 AKNAQ7Z591 1439 aa15.05■□□□□ 0
TOP3A-217ENST00000584582 WDR62O43379 1518 aa15.05■□□□□ 0
TOP3A-217ENST00000584582 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
TOP3A-217ENST00000584582 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
TOP3A-217ENST00000584582 SAMD9Q5K651 1589 aa15.05■□□□□ -0
TOP3A-217ENST00000584582 KDM6BO15054 1643 aa15.04■□□□□ -0
TOP3A-217ENST00000584582 CCDC146Q8IYE0 955 aa15.04■□□□□ -0
TOP3A-217ENST00000584582 ROCK1Q13464 1354 aa15.03■□□□□ -0
TOP3A-217ENST00000584582 PLIN1O60240 522 aa15.03■□□□□ -0
TOP3A-217ENST00000584582 KIAA0556O60303 1618 aa15.02□□□□□ -0.01
TOP3A-217ENST00000584582 NBR1Q14596 966 aa15.01□□□□□ -0.01
TOP3A-217ENST00000584582 KTN1Q86UP2 1357 aaKnown RBP15.01□□□□□ -0.01
TOP3A-217ENST00000584582 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
TOP3A-217ENST00000584582 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-217ENST00000584582 RAPGEF6Q8TEU7 1601 aa15□□□□□ -0.01
TOP3A-217ENST00000584582 RPRD2Q5VT52 1461 aaKnown RBP14.99□□□□□ -0.01
TOP3A-217ENST00000584582 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms