RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ARHGAP5Q13017 1502 aa28.15■■■□□ 2.1
RFFL-211ENST00000584541 CFAP74Q9C0B2 1584 aa28.12■■■□□ 2.09
RFFL-211ENST00000584541 CFDP1Q9UEE9 299 aaPredicted RBP28.12■■■□□ 2.09
RFFL-211ENST00000584541 MIA2Q96PC5 1412 aa28.1■■■□□ 2.09
RFFL-211ENST00000584541 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
RFFL-211ENST00000584541 FGD6Q6ZV73 1430 aa28.08■■■□□ 2.09
RFFL-211ENST00000584541 TEX14Q8IWB6 1497 aa28.08■■■□□ 2.09
RFFL-211ENST00000584541 PPRC1Q5VV67 1664 aaKnown RBP28.07■■■□□ 2.08
RFFL-211ENST00000584541 FANCAO15360 1455 aa28.07■■■□□ 2.08
RFFL-211ENST00000584541 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
RFFL-211ENST00000584541 PTPN23Q9H3S7 1636 aa28.05■■■□□ 2.08
RFFL-211ENST00000584541 ZNF777Q9ULD5 760 aaPredicted RBP28.04■■■□□ 2.08
RFFL-211ENST00000584541 NEO1Q92859 1461 aa28.02■■■□□ 2.08
RFFL-211ENST00000584541 SAMD9LQ8IVG5 1584 aa28.01■■■□□ 2.07
RFFL-211ENST00000584541 CAMSAP2Q08AD1 1489 aa27.99■■■□□ 2.07
RFFL-211ENST00000584541 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
RFFL-211ENST00000584541 PLEKHH2Q8IVE3 1493 aa27.98■■■□□ 2.07
RFFL-211ENST00000584541 TCOF1Q13428 1488 aaKnown RBP27.97■■■□□ 2.07
RFFL-211ENST00000584541 AKNAQ7Z591 1439 aa27.97■■■□□ 2.07
RFFL-211ENST00000584541 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.06
RFFL-211ENST00000584541 ABCC1P33527 1531 aa27.94■■■□□ 2.06
RFFL-211ENST00000584541 ADGRL1O94910 1474 aa27.94■■■□□ 2.06
RFFL-211ENST00000584541 ZNF644Q9H582 1327 aaPredicted RBP27.93■■■□□ 2.06
RFFL-211ENST00000584541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.91■■■□□ 2.06
RFFL-211ENST00000584541 SYCP2Q9BX26 1530 aa27.91■■■□□ 2.06
RFFL-211ENST00000584541 KIAA1107Q9UPP5 1409 aa27.91■■■□□ 2.06
RFFL-211ENST00000584541 SCAPERQ9BY12 1400 aa27.87■■■□□ 2.05
RFFL-211ENST00000584541 ARHGEF5Q12774 1597 aa27.86■■■□□ 2.05
RFFL-211ENST00000584541 HNRNPMP52272 730 aaKnown RBP eCLIP27.85■■■□□ 2.052e-6■■■■□ 21.2
RFFL-211ENST00000584541 DNMT1P26358 1616 aaKnown RBP27.85■■■□□ 2.05
RFFL-211ENST00000584541 RSPH4AQ5TD94 716 aa27.84■■■□□ 2.05
RFFL-211ENST00000584541 DENND4BO75064 1496 aaPredicted RBP27.83■■■□□ 2.04
RFFL-211ENST00000584541 ARHGEF12Q9NZN5 1544 aa27.82■■■□□ 2.04
RFFL-211ENST00000584541 MBD5Q9P267 1494 aa27.82■■■□□ 2.04
RFFL-211ENST00000584541 CCDC141Q6ZP82 1450 aa27.81■■■□□ 2.04
RFFL-211ENST00000584541 CROCC2H7BZ55 1655 aa27.81■■■□□ 2.04
RFFL-211ENST00000584541 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
RFFL-211ENST00000584541 RICTORQ6R327 1708 aa27.79■■■□□ 2.04
RFFL-211ENST00000584541 ZNF518AQ6AHZ1 1483 aa27.79■■■□□ 2.04
RFFL-211ENST00000584541 DAPK1P53355 1430 aa27.78■■■□□ 2.04
RFFL-211ENST00000584541 POGZQ7Z3K3 1410 aa27.78■■■□□ 2.04
RFFL-211ENST00000584541 TRAPPC8Q9Y2L5 1435 aa27.77■■■□□ 2.04
RFFL-211ENST00000584541 KDM6BO15054 1643 aa27.77■■■□□ 2.04
RFFL-211ENST00000584541 ITGAEP38570 1179 aa27.75■■■□□ 2.03
RFFL-211ENST00000584541 ABCC5O15440 1437 aa27.75■■■□□ 2.03
RFFL-211ENST00000584541 TSPY4P0CV99 314 aa27.74■■■□□ 2.03
RFFL-211ENST00000584541 TSPY10P0CW01 314 aa27.74■■■□□ 2.03
RFFL-211ENST00000584541 SHANK2Q9UPX8 1470 aa27.72■■■□□ 2.03
RFFL-211ENST00000584541 AFAP1Q8N556 730 aa27.72■■■□□ 2.03
RFFL-211ENST00000584541 KDM5CP41229 1560 aa27.72■■■□□ 2.03
RFFL-211ENST00000584541 RAPGEF3O95398 923 aa27.71■■■□□ 2.03
RFFL-211ENST00000584541 FRMPD1Q5SYB0 1578 aa27.71■■■□□ 2.03
RFFL-211ENST00000584541 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
RFFL-211ENST00000584541 MAST1Q9Y2H9 1570 aa27.69■■■□□ 2.02
RFFL-211ENST00000584541 COL17A1Q9UMD9 1497 aaPredicted RBP27.69■■■□□ 2.02
RFFL-211ENST00000584541 SPAG9O60271 1321 aaKnown RBP27.68■■■□□ 2.02
RFFL-211ENST00000584541 HECW2Q9P2P5 1572 aa27.68■■■□□ 2.02
RFFL-211ENST00000584541 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
RFFL-211ENST00000584541 MYT1LQ9UL68 1186 aa27.67■■■□□ 2.02
RFFL-211ENST00000584541 ZMYM4Q5VZL5 1548 aa27.67■■■□□ 2.02
RFFL-211ENST00000584541 INO80Q9ULG1 1556 aaPredicted RBP27.65■■■□□ 2.02
RFFL-211ENST00000584541 ATP7AQ04656 1500 aa27.64■■■□□ 2.02
RFFL-211ENST00000584541 RTEL1-TNFRSF6BF6WH68 1400 aa27.64■■■□□ 2.02
RFFL-211ENST00000584541 MLH3Q9UHC1 1453 aa27.64■■■□□ 2.01
RFFL-211ENST00000584541 CHIC2Q9UKJ5 165 aa27.63■■■□□ 2.01
RFFL-211ENST00000584541 PTPRKQ15262 1439 aa27.63■■■□□ 2.01
RFFL-211ENST00000584541 ZFYVE16Q7Z3T8 1539 aa27.62■■■□□ 2.01
RFFL-211ENST00000584541 KIDINS220Q9ULH0 1771 aa27.62■■■□□ 2.01
RFFL-211ENST00000584541 MAGI2Q86UL8 1455 aa27.61■■■□□ 2.01
RFFL-211ENST00000584541 ADGRL2O95490 1459 aa27.6■■■□□ 2.01
RFFL-211ENST00000584541 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
RFFL-211ENST00000584541 ANKRD30AQ9BXX3 1397 aa27.6■■■□□ 2.01
RFFL-211ENST00000584541 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
RFFL-211ENST00000584541 NCOA1Q15788 1441 aa27.54■■■□□ 2
RFFL-211ENST00000584541 ABCA6Q8N139 1617 aa27.53■■■□□ 2
RFFL-211ENST00000584541 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
RFFL-211ENST00000584541 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
RFFL-211ENST00000584541 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
RFFL-211ENST00000584541 DIP2CQ9Y2E4 1556 aa27.51■■□□□ 1.99
RFFL-211ENST00000584541 ARHGEF40Q8TER5 1519 aa27.51■■□□□ 1.99
RFFL-211ENST00000584541 KIF15Q9NS87 1388 aa27.5■■□□□ 1.99
RFFL-211ENST00000584541 YEATS2Q9ULM3 1422 aa27.49■■□□□ 1.99
RFFL-211ENST00000584541 DUOX2Q9NRD8 1548 aa27.48■■□□□ 1.99
RFFL-211ENST00000584541 HFM1A2PYH4 1435 aa27.47■■□□□ 1.99
RFFL-211ENST00000584541 ATP10AO60312 1499 aa27.44■■□□□ 1.98
RFFL-211ENST00000584541 A2MP01023 1474 aa27.44■■□□□ 1.98
RFFL-211ENST00000584541 NAIPQ13075 1403 aa27.43■■□□□ 1.98
RFFL-211ENST00000584541 REREQ9P2R6 1566 aa27.41■■□□□ 1.98
RFFL-211ENST00000584541 DHX29Q7Z478 1369 aaKnown RBP27.4■■□□□ 1.98
RFFL-211ENST00000584541 ERBINQ96RT1 1412 aa27.4■■□□□ 1.98
RFFL-211ENST00000584541 SETD5Q9C0A6 1442 aa27.4■■□□□ 1.98
RFFL-211ENST00000584541 ANKRD50Q9ULJ7 1429 aa27.4■■□□□ 1.98
RFFL-211ENST00000584541 EIF2AK4Q9P2K8 1649 aaKnown RBP27.38■■□□□ 1.97
RFFL-211ENST00000584541 BCORL1Q5H9F3 1711 aa27.33■■□□□ 1.96
RFFL-211ENST00000584541 AGLP35573 1532 aa27.31■■□□□ 1.96
RFFL-211ENST00000584541 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
RFFL-211ENST00000584541 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
RFFL-211ENST00000584541 KIF3BO15066 747 aa27.28■■□□□ 1.96
RFFL-211ENST00000584541 SIGLEC1Q9BZZ2 1709 aa27.27■■□□□ 1.96
RFFL-211ENST00000584541 ARID4BQ4LE39 1312 aaPredicted RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms