RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
PPP4R1-226ENST00000583903 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-226ENST00000583903 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-226ENST00000583903 PHF23Q9BUL5 403 aaPredicted RBP12.25□□□□□ -0.45
PPP4R1-226ENST00000583903 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
PPP4R1-226ENST00000583903 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-226ENST00000583903 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
PPP4R1-226ENST00000583903 ATP10AO60312 1499 aa12.21□□□□□ -0.45
PPP4R1-226ENST00000583903 NCOA1Q15788 1441 aa12.21□□□□□ -0.45
PPP4R1-226ENST00000583903 HSPA1LP34931 641 aa12.2□□□□□ -0.46
PPP4R1-226ENST00000583903 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
PPP4R1-226ENST00000583903 CFAP74Q9C0B2 1584 aa12.19□□□□□ -0.46
PPP4R1-226ENST00000583903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.19□□□□□ -0.46
PPP4R1-226ENST00000583903 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-226ENST00000583903 ZNF335Q9H4Z2 1342 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-226ENST00000583903 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
PPP4R1-226ENST00000583903 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
PPP4R1-226ENST00000583903 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
PPP4R1-226ENST00000583903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
PPP4R1-226ENST00000583903 RAPGEF6Q8TEU7 1601 aa12.15□□□□□ -0.47
PPP4R1-226ENST00000583903 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-226ENST00000583903 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
PPP4R1-226ENST00000583903 C3P01024 1663 aa12.13□□□□□ -0.47
PPP4R1-226ENST00000583903 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
PPP4R1-226ENST00000583903 CAMSAP1Q5T5Y3 1602 aa12.11□□□□□ -0.47
PPP4R1-226ENST00000583903 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
PPP4R1-226ENST00000583903 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
PPP4R1-226ENST00000583903 PLCH2O75038 1416 aa12.08□□□□□ -0.48
PPP4R1-226ENST00000583903 PRXQ9BXM0 1461 aa12.08□□□□□ -0.48
PPP4R1-226ENST00000583903 TOM1O60784 492 aa12.07□□□□□ -0.48
PPP4R1-226ENST00000583903 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
PPP4R1-226ENST00000583903 PKD2Q13563 968 aa12.06□□□□□ -0.48
PPP4R1-226ENST00000583903 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-226ENST00000583903 AGLP35573 1532 aa12.05□□□□□ -0.48
PPP4R1-226ENST00000583903 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
PPP4R1-226ENST00000583903 NPATQ14207 1427 aa12.04□□□□□ -0.48
PPP4R1-226ENST00000583903 PLA2R1Q13018 1463 aa12.04□□□□□ -0.48
PPP4R1-226ENST00000583903 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-226ENST00000583903 RGS17Q9UGC6 210 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-226ENST00000583903 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 ZNF518AQ6AHZ1 1483 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 KDM5CP41229 1560 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
PPP4R1-226ENST00000583903 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
PPP4R1-226ENST00000583903 CPS1P31327 1500 aa11.99□□□□□ -0.49
PPP4R1-226ENST00000583903 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
PPP4R1-226ENST00000583903 ALKQ9UM73 1620 aa11.98□□□□□ -0.49
PPP4R1-226ENST00000583903 MLH3Q9UHC1 1453 aa11.98□□□□□ -0.49
PPP4R1-226ENST00000583903 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
PPP4R1-226ENST00000583903 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
PPP4R1-226ENST00000583903 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
PPP4R1-226ENST00000583903 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-226ENST00000583903 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
PPP4R1-226ENST00000583903 MROH2AA6NES4 1674 aa11.95□□□□□ -0.5
PPP4R1-226ENST00000583903 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
PPP4R1-226ENST00000583903 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
PPP4R1-226ENST00000583903 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-226ENST00000583903 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
PPP4R1-226ENST00000583903 MYO5CQ9NQX4 1742 aa11.93□□□□□ -0.5
PPP4R1-226ENST00000583903 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
PPP4R1-226ENST00000583903 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
PPP4R1-226ENST00000583903 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
PPP4R1-226ENST00000583903 A2ML1A8K2U0 1454 aa11.88□□□□□ -0.51
PPP4R1-226ENST00000583903 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
PPP4R1-226ENST00000583903 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
PPP4R1-226ENST00000583903 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-226ENST00000583903 FOXD1Q16676 465 aa11.87□□□□□ -0.51
PPP4R1-226ENST00000583903 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
PPP4R1-226ENST00000583903 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-226ENST00000583903 KIF14Q15058 1648 aa11.86□□□□□ -0.51
PPP4R1-226ENST00000583903 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-226ENST00000583903 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-226ENST00000583903 ABCC1P33527 1531 aa11.83□□□□□ -0.52
PPP4R1-226ENST00000583903 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
PPP4R1-226ENST00000583903 LRRC7Q96NW7 1537 aa11.82□□□□□ -0.52
PPP4R1-226ENST00000583903 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
PPP4R1-226ENST00000583903 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-226ENST00000583903 CDC42BPBQ9Y5S2 1711 aa11.81□□□□□ -0.52
PPP4R1-226ENST00000583903 ANKLE2Q86XL3 938 aa11.81□□□□□ -0.52
PPP4R1-226ENST00000583903 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPP4R1-226ENST00000583903 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-226ENST00000583903 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
PPP4R1-226ENST00000583903 MED14O60244 1454 aa11.8□□□□□ -0.52
PPP4R1-226ENST00000583903 ITSN2Q9NZM3 1697 aa11.8□□□□□ -0.52
PPP4R1-226ENST00000583903 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
PPP4R1-226ENST00000583903 GGT6Q6P531 493 aa11.78□□□□□ -0.52
PPP4R1-226ENST00000583903 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
PPP4R1-226ENST00000583903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.78□□□□□ -0.52
PPP4R1-226ENST00000583903 CLIP1P30622 1438 aa11.77□□□□□ -0.52
PPP4R1-226ENST00000583903 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.52
PPP4R1-226ENST00000583903 PLXNC1O60486 1568 aa11.77□□□□□ -0.53
PPP4R1-226ENST00000583903 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.53
PPP4R1-226ENST00000583903 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
PPP4R1-226ENST00000583903 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
PPP4R1-226ENST00000583903 TNRQ92752 1358 aa11.76□□□□□ -0.53
PPP4R1-226ENST00000583903 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
PPP4R1-226ENST00000583903 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
PPP4R1-226ENST00000583903 FAM135BQ49AJ0 1406 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms