RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
CSNK1D-217ENST00000581241 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
CSNK1D-217ENST00000581241 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
CSNK1D-217ENST00000581241 HAP1P54257 671 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-217ENST00000581241 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-217ENST00000581241 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
CSNK1D-217ENST00000581241 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
CSNK1D-217ENST00000581241 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
CSNK1D-217ENST00000581241 GZF1Q9H116 711 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-217ENST00000581241 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
CSNK1D-217ENST00000581241 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.53
CSNK1D-217ENST00000581241 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
CSNK1D-217ENST00000581241 RALBP1Q15311 655 aa18.37■□□□□ 0.53
CSNK1D-217ENST00000581241 KANK1Q14678 1352 aa18.37■□□□□ 0.53
CSNK1D-217ENST00000581241 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
CSNK1D-217ENST00000581241 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
CSNK1D-217ENST00000581241 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
CSNK1D-217ENST00000581241 GOLGA2Q08379 1002 aa18.33■□□□□ 0.52
CSNK1D-217ENST00000581241 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 ITPRIPQ8IWB1 547 aa18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 ARID3AQ99856 593 aa18.32■□□□□ 0.52
CSNK1D-217ENST00000581241 TPM4P67936 248 aa18.3■□□□□ 0.52
CSNK1D-217ENST00000581241 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-217ENST00000581241 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
CSNK1D-217ENST00000581241 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-217ENST00000581241 SRPK2P78362 688 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-217ENST00000581241 RTF1Q92541 710 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-217ENST00000581241 NACADO15069 1562 aa18.27■□□□□ 0.52
CSNK1D-217ENST00000581241 CSPP1Q1MSJ5 1256 aa18.26■□□□□ 0.51
CSNK1D-217ENST00000581241 APBB1O00213 710 aa18.26■□□□□ 0.51
CSNK1D-217ENST00000581241 TNNT3P45378 269 aaPredicted RBP18.26■□□□□ 0.51
CSNK1D-217ENST00000581241 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
CSNK1D-217ENST00000581241 SOGA1O94964 1423 aa18.25■□□□□ 0.51
CSNK1D-217ENST00000581241 NPHP1O15259 732 aa18.25■□□□□ 0.51
CSNK1D-217ENST00000581241 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
CSNK1D-217ENST00000581241 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
CSNK1D-217ENST00000581241 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
CSNK1D-217ENST00000581241 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
CSNK1D-217ENST00000581241 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
CSNK1D-217ENST00000581241 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-217ENST00000581241 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
CSNK1D-217ENST00000581241 PHF14O94880 888 aa18.21■□□□□ 0.51
CSNK1D-217ENST00000581241 PKD2Q13563 968 aa18.2■□□□□ 0.5
CSNK1D-217ENST00000581241 GOLGA6L1Q8N7Z2 621 aa18.2■□□□□ 0.5
CSNK1D-217ENST00000581241 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
CSNK1D-217ENST00000581241 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
CSNK1D-217ENST00000581241 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
CSNK1D-217ENST00000581241 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
CSNK1D-217ENST00000581241 CLSTN1O94985 981 aa18.18■□□□□ 0.5
CSNK1D-217ENST00000581241 CUX2O14529 1486 aa18.18■□□□□ 0.5
CSNK1D-217ENST00000581241 U2AF1L5P0DN76 240 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-217ENST00000581241 U2AF1Q01081 240 aaKnown RBP eCLIP18.17■□□□□ 0.56e-7■□□□□ 10.7
CSNK1D-217ENST00000581241 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
CSNK1D-217ENST00000581241 FOXD1Q16676 465 aa18.16■□□□□ 0.5
CSNK1D-217ENST00000581241 GPATCH3Q96I76 525 aa18.16■□□□□ 0.5
CSNK1D-217ENST00000581241 HDGFP51858 240 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-217ENST00000581241 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CSNK1D-217ENST00000581241 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
CSNK1D-217ENST00000581241 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
CSNK1D-217ENST00000581241 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
CSNK1D-217ENST00000581241 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-217ENST00000581241 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-217ENST00000581241 SOX12O15370 315 aa18.13■□□□□ 0.49
CSNK1D-217ENST00000581241 GSE1Q14687 1217 aa18.13■□□□□ 0.49
CSNK1D-217ENST00000581241 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.491e-12■■■■■ 37.9
CSNK1D-217ENST00000581241 HMMRO75330 724 aa18.12■□□□□ 0.49
CSNK1D-217ENST00000581241 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
CSNK1D-217ENST00000581241 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
CSNK1D-217ENST00000581241 ST18O60284 1047 aa18.12■□□□□ 0.49
CSNK1D-217ENST00000581241 CENPQQ7L2Z9 268 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-217ENST00000581241 KIF15Q9NS87 1388 aa18.11■□□□□ 0.49
CSNK1D-217ENST00000581241 SKOR2Q2VWA4 1001 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-217ENST00000581241 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
CSNK1D-217ENST00000581241 CCDC34Q96HJ3 373 aa18.1■□□□□ 0.49
CSNK1D-217ENST00000581241 ABCC8Q09428 1581 aa18.09■□□□□ 0.49
CSNK1D-217ENST00000581241 PDE4AP27815 886 aa18.08■□□□□ 0.49
CSNK1D-217ENST00000581241 CCDC146Q8IYE0 955 aa18.08■□□□□ 0.49
CSNK1D-217ENST00000581241 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
CSNK1D-217ENST00000581241 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.48
CSNK1D-217ENST00000581241 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
CSNK1D-217ENST00000581241 ISY1Q9ULR0 285 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-217ENST00000581241 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
CSNK1D-217ENST00000581241 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-217ENST00000581241 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
CSNK1D-217ENST00000581241 STK26Q9P289 416 aa18.06■□□□□ 0.48
CSNK1D-217ENST00000581241 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-217ENST00000581241 NOL8Q76FK4 1167 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-217ENST00000581241 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
CSNK1D-217ENST00000581241 NUP155O75694 1391 aa18.05■□□□□ 0.48
CSNK1D-217ENST00000581241 A0A0U1RQG5 324 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-217ENST00000581241 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
CSNK1D-217ENST00000581241 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-217ENST00000581241 HDAC5Q9UQL6 1122 aa18.03■□□□□ 0.48
CSNK1D-217ENST00000581241 RRP1P56182 461 aaKnown RBP18.02■□□□□ 0.48
CSNK1D-217ENST00000581241 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
CSNK1D-217ENST00000581241 TPM3P06753 285 aa18.01■□□□□ 0.47
CSNK1D-217ENST00000581241 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms