RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ITSN2Q9NZM3 1697 aa13.99□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-220ENST00000581160 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
CDK5RAP3-220ENST00000581160 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
CDK5RAP3-220ENST00000581160 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-220ENST00000581160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-220ENST00000581160 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
CDK5RAP3-220ENST00000581160 TCOF1Q13428 1488 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-220ENST00000581160 FANCAO15360 1455 aa13.95□□□□□ -0.18
CDK5RAP3-220ENST00000581160 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
CDK5RAP3-220ENST00000581160 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-220ENST00000581160 RSPH4AQ5TD94 716 aa13.94□□□□□ -0.18
CDK5RAP3-220ENST00000581160 AKNAQ7Z591 1439 aa13.94□□□□□ -0.18
CDK5RAP3-220ENST00000581160 NEO1Q92859 1461 aa13.93□□□□□ -0.18
CDK5RAP3-220ENST00000581160 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
CDK5RAP3-220ENST00000581160 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDK5RAP3-220ENST00000581160 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
CDK5RAP3-220ENST00000581160 TEX14Q8IWB6 1497 aa13.93□□□□□ -0.18
CDK5RAP3-220ENST00000581160 CAMSAP2Q08AD1 1489 aa13.92□□□□□ -0.18
CDK5RAP3-220ENST00000581160 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
CDK5RAP3-220ENST00000581160 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
CDK5RAP3-220ENST00000581160 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
CDK5RAP3-220ENST00000581160 PPRC1Q5VV67 1664 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-220ENST00000581160 SCAPERQ9BY12 1400 aa13.9□□□□□ -0.19
CDK5RAP3-220ENST00000581160 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ARHGEF12Q9NZN5 1544 aa13.88□□□□□ -0.19
CDK5RAP3-220ENST00000581160 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
CDK5RAP3-220ENST00000581160 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ABCC5O15440 1437 aa13.87□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ABCC1P33527 1531 aa13.86□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ITGAEP38570 1179 aa13.86□□□□□ -0.19
CDK5RAP3-220ENST00000581160 ARHGEF5Q12774 1597 aa13.86□□□□□ -0.19
CDK5RAP3-220ENST00000581160 DAPK1P53355 1430 aa13.85□□□□□ -0.19
CDK5RAP3-220ENST00000581160 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
CDK5RAP3-220ENST00000581160 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
CDK5RAP3-220ENST00000581160 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
CDK5RAP3-220ENST00000581160 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-220ENST00000581160 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-220ENST00000581160 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
CDK5RAP3-220ENST00000581160 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
CDK5RAP3-220ENST00000581160 RAPGEF3O95398 923 aa13.83□□□□□ -0.2
CDK5RAP3-220ENST00000581160 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
CDK5RAP3-220ENST00000581160 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
CDK5RAP3-220ENST00000581160 SPAG9O60271 1321 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-220ENST00000581160 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
CDK5RAP3-220ENST00000581160 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
CDK5RAP3-220ENST00000581160 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-220ENST00000581160 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
CDK5RAP3-220ENST00000581160 RTEL1-TNFRSF6BF6WH68 1400 aa13.79□□□□□ -0.2
CDK5RAP3-220ENST00000581160 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
CDK5RAP3-220ENST00000581160 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
CDK5RAP3-220ENST00000581160 MAST1Q9Y2H9 1570 aa13.78□□□□□ -0.2
CDK5RAP3-220ENST00000581160 NCOA1Q15788 1441 aa13.77□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ANKRD30AQ9BXX3 1397 aa13.77□□□□□ -0.21
CDK5RAP3-220ENST00000581160 MLH3Q9UHC1 1453 aa13.77□□□□□ -0.21
CDK5RAP3-220ENST00000581160 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
CDK5RAP3-220ENST00000581160 RICTORQ6R327 1708 aa13.76□□□□□ -0.21
CDK5RAP3-220ENST00000581160 CROCC2H7BZ55 1655 aa13.76□□□□□ -0.21
CDK5RAP3-220ENST00000581160 KDM5CP41229 1560 aa13.76□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ADGRL2O95490 1459 aa13.76□□□□□ -0.21
CDK5RAP3-220ENST00000581160 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
CDK5RAP3-220ENST00000581160 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
CDK5RAP3-220ENST00000581160 FRMPD1Q5SYB0 1578 aa13.74□□□□□ -0.21
CDK5RAP3-220ENST00000581160 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ZMYM4Q5VZL5 1548 aa13.72□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ADGBQ8N7X0 1667 aa13.72□□□□□ -0.21
CDK5RAP3-220ENST00000581160 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
CDK5RAP3-220ENST00000581160 INO80Q9ULG1 1556 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-220ENST00000581160 KIDINS220Q9ULH0 1771 aa13.71□□□□□ -0.21
CDK5RAP3-220ENST00000581160 ZFYVE16Q7Z3T8 1539 aa13.71□□□□□ -0.21
CDK5RAP3-220ENST00000581160 HRCP23327 699 aa13.71□□□□□ -0.21
CDK5RAP3-220ENST00000581160 NAIPQ13075 1403 aa13.71□□□□□ -0.22
CDK5RAP3-220ENST00000581160 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.22
CDK5RAP3-220ENST00000581160 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.22
CDK5RAP3-220ENST00000581160 KIF15Q9NS87 1388 aa13.71□□□□□ -0.22
CDK5RAP3-220ENST00000581160 PLXNC1O60486 1568 aa13.7□□□□□ -0.22
CDK5RAP3-220ENST00000581160 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-220ENST00000581160 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
CDK5RAP3-220ENST00000581160 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-220ENST00000581160 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
CDK5RAP3-220ENST00000581160 ATP10AO60312 1499 aa13.67□□□□□ -0.22
CDK5RAP3-220ENST00000581160 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
CDK5RAP3-220ENST00000581160 A2MP01023 1474 aa13.66□□□□□ -0.22
CDK5RAP3-220ENST00000581160 RAB3GAP2Q9H2M9 1393 aa13.65□□□□□ -0.22
CDK5RAP3-220ENST00000581160 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
CDK5RAP3-220ENST00000581160 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
CDK5RAP3-220ENST00000581160 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
CDK5RAP3-220ENST00000581160 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
CDK5RAP3-220ENST00000581160 KIF3BO15066 747 aa13.62□□□□□ -0.23
CDK5RAP3-220ENST00000581160 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
CDK5RAP3-220ENST00000581160 ARHGEF40Q8TER5 1519 aa13.6□□□□□ -0.23
CDK5RAP3-220ENST00000581160 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
CDK5RAP3-220ENST00000581160 AGLP35573 1532 aa13.59□□□□□ -0.23
CDK5RAP3-220ENST00000581160 EIF2AK4Q9P2K8 1649 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-220ENST00000581160 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
CDK5RAP3-220ENST00000581160 GGT6Q6P531 493 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms