RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.03	□□□□□ -0.64
KPNB1-209	ENST00000580158	CERK	Q8TCT0	537 aa		11.01	□□□□□ -0.65
KPNB1-209	ENST00000580158	KIF21B	O75037	1637 aa		11.01	□□□□□ -0.65
KPNB1-209	ENST00000580158	CLCN6	P51797	869 aa		11	□□□□□ -0.65
KPNB1-209	ENST00000580158	KIAA0586	Q9BVV6	1533 aa		10.99	□□□□□ -0.65
KPNB1-209	ENST00000580158	CREBZF	Q9NS37	354 aa		10.99	□□□□□ -0.65
KPNB1-209	ENST00000580158	EPRS	P07814	1512 aa	Known RBP	10.99	□□□□□ -0.65
KPNB1-209	ENST00000580158	SPATA31D1	Q6ZQQ2	1576 aa		10.99	□□□□□ -0.65
KPNB1-209	ENST00000580158	BIVM-ERCC5	R4GMW8	1640 aa		10.98	□□□□□ -0.65
KPNB1-209	ENST00000580158	PCF11	O94913	1555 aa	Known RBP	10.98	□□□□□ -0.65
KPNB1-209	ENST00000580158	PTPRM	P28827	1452 aa		10.97	□□□□□ -0.65
KPNB1-209	ENST00000580158	CARMIL2	Q6F5E8	1435 aa		10.95	□□□□□ -0.66
KPNB1-209	ENST00000580158	TNIK	Q9UKE5	1360 aa		10.95	□□□□□ -0.66
KPNB1-209	ENST00000580158	UHRF1BP1L	A0JNW5	1464 aa		10.94	□□□□□ -0.66
KPNB1-209	ENST00000580158	ADAMTSL3	P82987	1691 aa		10.94	□□□□□ -0.66
KPNB1-209	ENST00000580158	ZRANB1	Q9UGI0	708 aa		10.93	□□□□□ -0.66
KPNB1-209	ENST00000580158	UACA	Q9BZF9	1416 aa		10.92	□□□□□ -0.66
KPNB1-209	ENST00000580158	CFAP43	Q8NDM7	1665 aa		10.91	□□□□□ -0.66
KPNB1-209	ENST00000580158	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.91	□□□□□ -0.66
KPNB1-209	ENST00000580158	LHX8	Q68G74	356 aa		10.9	□□□□□ -0.66
KPNB1-209	ENST00000580158	KDM5B	Q9UGL1	1544 aa		10.89	□□□□□ -0.67
KPNB1-209	ENST00000580158	CD109	Q6YHK3	1445 aa		10.88	□□□□□ -0.67
KPNB1-209	ENST00000580158	ZNF579	Q8NAF0	562 aa	Known RBP	10.88	□□□□□ -0.67
KPNB1-209	ENST00000580158	MAGI3	Q5TCQ9	1506 aa		10.88	□□□□□ -0.67
KPNB1-209	ENST00000580158	BCORL1	Q5H9F3	1711 aa		10.87	□□□□□ -0.67
KPNB1-209	ENST00000580158	PAK3	O75914	559 aa	Predicted RBP	10.87	□□□□□ -0.67
KPNB1-209	ENST00000580158	HSPA2	P54652	639 aa		10.87	□□□□□ -0.67
KPNB1-209	ENST00000580158	DCBLD2	Q96PD2	775 aa		10.87	□□□□□ -0.67
KPNB1-209	ENST00000580158	MADD	Q8WXG6	1647 aa		10.86	□□□□□ -0.67
KPNB1-209	ENST00000580158	WDR7	Q9Y4E6	1490 aa		10.86	□□□□□ -0.67
KPNB1-209	ENST00000580158	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.85	□□□□□ -0.67
KPNB1-209	ENST00000580158	RIMS1	Q86UR5	1692 aa	Known RBP	10.85	□□□□□ -0.67
KPNB1-209	ENST00000580158	POTEI	P0CG38	1075 aa		10.84	□□□□□ -0.67
KPNB1-209	ENST00000580158	KCNH8	Q96L42	1107 aa		10.83	□□□□□ -0.68
KPNB1-209	ENST00000580158	ARAP3	Q8WWN8	1544 aa		10.82	□□□□□ -0.68
KPNB1-209	ENST00000580158	IQGAP2	Q13576	1575 aa		10.81	□□□□□ -0.68
KPNB1-209	ENST00000580158	IGF1R	P08069	1367 aa		10.77	□□□□□ -0.68
KPNB1-209	ENST00000580158	PHLDB1	Q86UU1	1377 aa		10.77	□□□□□ -0.69
KPNB1-209	ENST00000580158	MNX1	P50219	401 aa	Predicted RBP	10.76	□□□□□ -0.69
KPNB1-209	ENST00000580158	PROM2	Q8N271	834 aa		10.76	□□□□□ -0.69
KPNB1-209	ENST00000580158	DISP1	Q96F81	1524 aa		10.75	□□□□□ -0.69
KPNB1-209	ENST00000580158	KIF27	Q86VH2	1401 aa		10.75	□□□□□ -0.69
KPNB1-209	ENST00000580158	GALR2	O43603	387 aa	Predicted RBP	10.74	□□□□□ -0.69
KPNB1-209	ENST00000580158	RAPGEF3	O95398	923 aa		10.73	□□□□□ -0.69
KPNB1-209	ENST00000580158	PHF12	Q96QT6	1004 aa		10.73	□□□□□ -0.69
KPNB1-209	ENST00000580158	CARMIL1	Q5VZK9	1371 aa		10.73	□□□□□ -0.69
KPNB1-209	ENST00000580158	PREX1	Q8TCU6	1659 aa		10.73	□□□□□ -0.69
KPNB1-209	ENST00000580158	POGZ	Q7Z3K3	1410 aa		10.72	□□□□□ -0.69
KPNB1-209	ENST00000580158	YEATS2	Q9ULM3	1422 aa		10.72	□□□□□ -0.69
KPNB1-209	ENST00000580158	KIAA0556	O60303	1618 aa		10.71	□□□□□ -0.69
KPNB1-209	ENST00000580158	STRC	Q7RTU9	1775 aa		10.71	□□□□□ -0.69
KPNB1-209	ENST00000580158	FER1L4	A9Z1Z3	1794 aa		10.7	□□□□□ -0.7
KPNB1-209	ENST00000580158	SETD1B	Q9UPS6	1966 aa	Known RBP	10.7	□□□□□ -0.7
KPNB1-209	ENST00000580158	UGGT2	Q9NYU1	1516 aa		10.69	□□□□□ -0.7
KPNB1-209	ENST00000580158	PLEKHG5	O94827	1062 aa		10.69	□□□□□ -0.7
KPNB1-209	ENST00000580158	IQSEC2	Q5JU85	1478 aa		10.68	□□□□□ -0.7
KPNB1-209	ENST00000580158	FANCA	O15360	1455 aa		10.68	□□□□□ -0.7
KPNB1-209	ENST00000580158	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.67	□□□□□ -0.7
KPNB1-209	ENST00000580158	NEO1	Q92859	1461 aa		10.67	□□□□□ -0.7
KPNB1-209	ENST00000580158	ARHGEF40	Q8TER5	1519 aa		10.66	□□□□□ -0.7
KPNB1-209	ENST00000580158	ABCA9	Q8IUA7	1624 aa		10.66	□□□□□ -0.7
KPNB1-209	ENST00000580158	MIER1	Q8N108	512 aa		10.65	□□□□□ -0.7
KPNB1-209	ENST00000580158	FRMPD1	Q5SYB0	1578 aa		10.65	□□□□□ -0.71
KPNB1-209	ENST00000580158	TTC37	Q6PGP7	1564 aa		10.65	□□□□□ -0.71
KPNB1-209	ENST00000580158	MLEC	Q14165	292 aa		10.64	□□□□□ -0.71
KPNB1-209	ENST00000580158	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.64	□□□□□ -0.71
KPNB1-209	ENST00000580158	ABCA8	O94911	1581 aa		10.64	□□□□□ -0.71
KPNB1-209	ENST00000580158	PTPRT	O14522	1441 aa		10.63	□□□□□ -0.71
KPNB1-209	ENST00000580158	AKNA	Q7Z591	1439 aa		10.62	□□□□□ -0.71
KPNB1-209	ENST00000580158	RICTOR	Q6R327	1708 aa		10.61	□□□□□ -0.71
KPNB1-209	ENST00000580158	UHRF1BP1	Q6BDS2	1440 aa		10.61	□□□□□ -0.71
KPNB1-209	ENST00000580158	LTBP4	Q8N2S1	1624 aa		10.61	□□□□□ -0.71
KPNB1-209	ENST00000580158	UBAP1L	F5GYI3	381 aa		10.6	□□□□□ -0.71
KPNB1-209	ENST00000580158	DENND4B	O75064	1496 aa	Predicted RBP	10.6	□□□□□ -0.71
KPNB1-209	ENST00000580158	GOLGA3	Q08378	1498 aa		10.6	□□□□□ -0.71
KPNB1-209	ENST00000580158	MED1	Q15648	1581 aa	Predicted RBP	10.59	□□□□□ -0.71
KPNB1-209	ENST00000580158	EFCAB5	A4FU69	1503 aa		10.58	□□□□□ -0.72
KPNB1-209	ENST00000580158	CTTNBP2	Q8WZ74	1663 aa		10.58	□□□□□ -0.72
KPNB1-209	ENST00000580158	MS4A3	Q96HJ5	214 aa		10.58	□□□□□ -0.72
KPNB1-209	ENST00000580158	ARID3C	A6NKF2	412 aa		10.57	□□□□□ -0.72
KPNB1-209	ENST00000580158	SUPT5H	O00267	1087 aa	Known RBP	10.57	□□□□□ -0.72
KPNB1-209	ENST00000580158	SIGLEC1	Q9BZZ2	1709 aa		10.57	□□□□□ -0.72
KPNB1-209	ENST00000580158	ZFYVE16	Q7Z3T8	1539 aa		10.57	□□□□□ -0.72
KPNB1-209	ENST00000580158	RAPGEF2	Q9Y4G8	1499 aa		10.56	□□□□□ -0.72
KPNB1-209	ENST00000580158	CEBPA	P49715	358 aa	Predicted RBP	10.56	□□□□□ -0.72
KPNB1-209	ENST00000580158	PLCD3	Q8N3E9	789 aa		10.56	□□□□□ -0.72
KPNB1-209	ENST00000580158	CFAP74	Q9C0B2	1584 aa		10.56	□□□□□ -0.72
KPNB1-209	ENST00000580158	FHOD3	Q2V2M9	1422 aa		10.55	□□□□□ -0.72
KPNB1-209	ENST00000580158	ATP10B	O94823	1461 aa		10.55	□□□□□ -0.72
KPNB1-209	ENST00000580158	CCDC61	Q9Y6R9	512 aa		10.54	□□□□□ -0.72
KPNB1-209	ENST00000580158	MAGI2	Q86UL8	1455 aa		10.54	□□□□□ -0.72
KPNB1-209	ENST00000580158	ZMYM4	Q5VZL5	1548 aa		10.53	□□□□□ -0.72
KPNB1-209	ENST00000580158	PELP1	Q8IZL8	1130 aa	Known RBP	10.53	□□□□□ -0.72
KPNB1-209	ENST00000580158	ARHGEF12	Q9NZN5	1544 aa		10.53	□□□□□ -0.72
KPNB1-209	ENST00000580158	ASTL	Q6HA08	431 aa	Predicted RBP	10.52	□□□□□ -0.73
KPNB1-209	ENST00000580158	ATMIN	O43313	823 aa	Predicted RBP	10.51	□□□□□ -0.73
KPNB1-209	ENST00000580158	HSPA1L	P34931	641 aa		10.5	□□□□□ -0.73
KPNB1-209	ENST00000580158	SLC39A7	Q92504	469 aa		10.5	□□□□□ -0.73
KPNB1-209	ENST00000580158	KIF12	Q96FN5	646 aa		10.5	□□□□□ -0.73
KPNB1-209	ENST00000580158	HECW1	Q76N89	1606 aa		10.49	□□□□□ -0.73

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