RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 PLEKHD1A6NEE1 506 aa13.85□□□□□ -0.19
PPP4R1-212ENST00000579415 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
PPP4R1-212ENST00000579415 ATP10AO60312 1499 aa13.84□□□□□ -0.19
PPP4R1-212ENST00000579415 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
PPP4R1-212ENST00000579415 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.2
PPP4R1-212ENST00000579415 C9orf84Q5VXU9 1444 aa13.81□□□□□ -0.2
PPP4R1-212ENST00000579415 HECW1Q76N89 1606 aa13.81□□□□□ -0.2
PPP4R1-212ENST00000579415 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
PPP4R1-212ENST00000579415 CFAP74Q9C0B2 1584 aa13.8□□□□□ -0.2
PPP4R1-212ENST00000579415 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
PPP4R1-212ENST00000579415 NCOA1Q15788 1441 aa13.79□□□□□ -0.2
PPP4R1-212ENST00000579415 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
PPP4R1-212ENST00000579415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
PPP4R1-212ENST00000579415 RAPGEF6Q8TEU7 1601 aa13.78□□□□□ -0.2
PPP4R1-212ENST00000579415 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.21
PPP4R1-212ENST00000579415 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
PPP4R1-212ENST00000579415 HSPA1LP34931 641 aa13.75□□□□□ -0.21
PPP4R1-212ENST00000579415 SETD1BQ9UPS6 1966 aaKnown RBP13.74□□□□□ -0.21
PPP4R1-212ENST00000579415 PLCH2O75038 1416 aa13.74□□□□□ -0.21
PPP4R1-212ENST00000579415 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
PPP4R1-212ENST00000579415 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
PPP4R1-212ENST00000579415 NCKAP5LQ9HCH0 1330 aa13.71□□□□□ -0.21
PPP4R1-212ENST00000579415 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
PPP4R1-212ENST00000579415 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
PPP4R1-212ENST00000579415 SAMD9Q5K651 1589 aa13.7□□□□□ -0.22
PPP4R1-212ENST00000579415 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
PPP4R1-212ENST00000579415 PKD2Q13563 968 aa13.68□□□□□ -0.22
PPP4R1-212ENST00000579415 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
PPP4R1-212ENST00000579415 TOM1O60784 492 aa13.67□□□□□ -0.22
PPP4R1-212ENST00000579415 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
PPP4R1-212ENST00000579415 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
PPP4R1-212ENST00000579415 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
PPP4R1-212ENST00000579415 CAMSAP1Q5T5Y3 1602 aa13.66□□□□□ -0.22
PPP4R1-212ENST00000579415 NPATQ14207 1427 aa13.64□□□□□ -0.23
PPP4R1-212ENST00000579415 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
PPP4R1-212ENST00000579415 C3P01024 1663 aa13.64□□□□□ -0.23
PPP4R1-212ENST00000579415 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
PPP4R1-212ENST00000579415 AGLP35573 1532 aa13.63□□□□□ -0.23
PPP4R1-212ENST00000579415 PPP6R1Q9UPN7 881 aa13.62□□□□□ -0.23
PPP4R1-212ENST00000579415 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
PPP4R1-212ENST00000579415 KDM5CP41229 1560 aa13.61□□□□□ -0.23
PPP4R1-212ENST00000579415 PLA2R1Q13018 1463 aa13.61□□□□□ -0.23
PPP4R1-212ENST00000579415 DIP2CQ9Y2E4 1556 aa13.6□□□□□ -0.23
PPP4R1-212ENST00000579415 TCOF1Q13428 1488 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-212ENST00000579415 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
PPP4R1-212ENST00000579415 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
PPP4R1-212ENST00000579415 CDK13Q14004 1512 aaKnown RBP13.56□□□□□ -0.24
PPP4R1-212ENST00000579415 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
PPP4R1-212ENST00000579415 RGS17Q9UGC6 210 aaPredicted RBP13.55□□□□□ -0.24
PPP4R1-212ENST00000579415 CDK11AQ9UQ88 783 aaPredicted RBP13.55□□□□□ -0.24
PPP4R1-212ENST00000579415 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
PPP4R1-212ENST00000579415 CPS1P31327 1500 aa13.53□□□□□ -0.24
PPP4R1-212ENST00000579415 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
PPP4R1-212ENST00000579415 ABCA6Q8N139 1617 aa13.53□□□□□ -0.24
PPP4R1-212ENST00000579415 SHANK2Q9UPX8 1470 aa13.5□□□□□ -0.25
PPP4R1-212ENST00000579415 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
PPP4R1-212ENST00000579415 MYO5CQ9NQX4 1742 aa13.49□□□□□ -0.25
PPP4R1-212ENST00000579415 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
PPP4R1-212ENST00000579415 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
PPP4R1-212ENST00000579415 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
PPP4R1-212ENST00000579415 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.25
PPP4R1-212ENST00000579415 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
PPP4R1-212ENST00000579415 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
PPP4R1-212ENST00000579415 ALKQ9UM73 1620 aa13.45□□□□□ -0.26
PPP4R1-212ENST00000579415 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
PPP4R1-212ENST00000579415 KIF14Q15058 1648 aa13.44□□□□□ -0.26
PPP4R1-212ENST00000579415 CLIP1P30622 1438 aa13.44□□□□□ -0.26
PPP4R1-212ENST00000579415 POTEAQ6S8J7 498 aa13.43□□□□□ -0.26
PPP4R1-212ENST00000579415 ABCC1P33527 1531 aa13.43□□□□□ -0.26
PPP4R1-212ENST00000579415 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
PPP4R1-212ENST00000579415 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
PPP4R1-212ENST00000579415 GGT6Q6P531 493 aa13.41□□□□□ -0.26
PPP4R1-212ENST00000579415 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
PPP4R1-212ENST00000579415 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
PPP4R1-212ENST00000579415 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
PPP4R1-212ENST00000579415 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
PPP4R1-212ENST00000579415 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-212ENST00000579415 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-212ENST00000579415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
PPP4R1-212ENST00000579415 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-212ENST00000579415 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
PPP4R1-212ENST00000579415 A2MP01023 1474 aa13.36□□□□□ -0.27
PPP4R1-212ENST00000579415 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
PPP4R1-212ENST00000579415 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-212ENST00000579415 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-212ENST00000579415 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-212ENST00000579415 MED14O60244 1454 aa13.35□□□□□ -0.27
PPP4R1-212ENST00000579415 TNRQ92752 1358 aa13.34□□□□□ -0.27
PPP4R1-212ENST00000579415 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
PPP4R1-212ENST00000579415 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.279e-6■■■■□ 20.2
PPP4R1-212ENST00000579415 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-212ENST00000579415 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
PPP4R1-212ENST00000579415 EEA1Q15075 1411 aa13.33□□□□□ -0.28
PPP4R1-212ENST00000579415 PLXNC1O60486 1568 aa13.32□□□□□ -0.28
PPP4R1-212ENST00000579415 PREX2Q70Z35 1606 aa13.32□□□□□ -0.28
PPP4R1-212ENST00000579415 ATP7AQ04656 1500 aa13.29□□□□□ -0.28
PPP4R1-212ENST00000579415 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
PPP4R1-212ENST00000579415 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R1-212ENST00000579415 FAM135BQ49AJ0 1406 aa13.29□□□□□ -0.28
PPP4R1-212ENST00000579415 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms