RNA–Protein interactions for RNA: ENST00000579415.5

PPP4R1-212, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-212ENST00000579415 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
PPP4R1-212ENST00000579415 ABCC9O60706 1549 aa19.51■□□□□ 0.71
PPP4R1-212ENST00000579415 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
PPP4R1-212ENST00000579415 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
PPP4R1-212ENST00000579415 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
PPP4R1-212ENST00000579415 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
PPP4R1-212ENST00000579415 NACADO15069 1562 aa17.98■□□□□ 0.47
PPP4R1-212ENST00000579415 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
PPP4R1-212ENST00000579415 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
PPP4R1-212ENST00000579415 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
PPP4R1-212ENST00000579415 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
PPP4R1-212ENST00000579415 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
PPP4R1-212ENST00000579415 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
PPP4R1-212ENST00000579415 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
PPP4R1-212ENST00000579415 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
PPP4R1-212ENST00000579415 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-212ENST00000579415 CUX2O14529 1486 aa17.1■□□□□ 0.33
PPP4R1-212ENST00000579415 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
PPP4R1-212ENST00000579415 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
PPP4R1-212ENST00000579415 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
PPP4R1-212ENST00000579415 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
PPP4R1-212ENST00000579415 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
PPP4R1-212ENST00000579415 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
PPP4R1-212ENST00000579415 NESP48681 1621 aa16.56■□□□□ 0.24
PPP4R1-212ENST00000579415 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
PPP4R1-212ENST00000579415 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
PPP4R1-212ENST00000579415 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
PPP4R1-212ENST00000579415 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
PPP4R1-212ENST00000579415 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
PPP4R1-212ENST00000579415 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
PPP4R1-212ENST00000579415 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
PPP4R1-212ENST00000579415 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
PPP4R1-212ENST00000579415 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
PPP4R1-212ENST00000579415 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
PPP4R1-212ENST00000579415 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
PPP4R1-212ENST00000579415 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
PPP4R1-212ENST00000579415 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
PPP4R1-212ENST00000579415 WDR62O43379 1518 aa16.14■□□□□ 0.17
PPP4R1-212ENST00000579415 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
PPP4R1-212ENST00000579415 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
PPP4R1-212ENST00000579415 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
PPP4R1-212ENST00000579415 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
PPP4R1-212ENST00000579415 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
PPP4R1-212ENST00000579415 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
PPP4R1-212ENST00000579415 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
PPP4R1-212ENST00000579415 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
PPP4R1-212ENST00000579415 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
PPP4R1-212ENST00000579415 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
PPP4R1-212ENST00000579415 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
PPP4R1-212ENST00000579415 URB2Q14146 1524 aaKnown RBP15.81■□□□□ 0.12
PPP4R1-212ENST00000579415 CFTRP13569 1480 aa15.8■□□□□ 0.12
PPP4R1-212ENST00000579415 ARAP1Q96P48 1450 aa15.74■□□□□ 0.11
PPP4R1-212ENST00000579415 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-212ENST00000579415 IFT140Q96RY7 1462 aa15.71■□□□□ 0.1
PPP4R1-212ENST00000579415 WIZO95785 1651 aa15.65■□□□□ 0.1
PPP4R1-212ENST00000579415 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
PPP4R1-212ENST00000579415 FBLN2P98095 1184 aa15.58■□□□□ 0.08
PPP4R1-212ENST00000579415 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
PPP4R1-212ENST00000579415 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.087e-12■□□□□ 9.9
PPP4R1-212ENST00000579415 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
PPP4R1-212ENST00000579415 CHD1O14646 1710 aa15.47■□□□□ 0.07
PPP4R1-212ENST00000579415 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
PPP4R1-212ENST00000579415 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
PPP4R1-212ENST00000579415 CLASP1Q7Z460 1538 aa15.4■□□□□ 0.06
PPP4R1-212ENST00000579415 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
PPP4R1-212ENST00000579415 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
PPP4R1-212ENST00000579415 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
PPP4R1-212ENST00000579415 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
PPP4R1-212ENST00000579415 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
PPP4R1-212ENST00000579415 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
PPP4R1-212ENST00000579415 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
PPP4R1-212ENST00000579415 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
PPP4R1-212ENST00000579415 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
PPP4R1-212ENST00000579415 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
PPP4R1-212ENST00000579415 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
PPP4R1-212ENST00000579415 SOGA1O94964 1423 aa15.3■□□□□ 0.04
PPP4R1-212ENST00000579415 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
PPP4R1-212ENST00000579415 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
PPP4R1-212ENST00000579415 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
PPP4R1-212ENST00000579415 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
PPP4R1-212ENST00000579415 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
PPP4R1-212ENST00000579415 KDM4FA0A1W2PPD8 638 aa15.19■□□□□ 0.02
PPP4R1-212ENST00000579415 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
PPP4R1-212ENST00000579415 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
PPP4R1-212ENST00000579415 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
PPP4R1-212ENST00000579415 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
PPP4R1-212ENST00000579415 CUX1P39880 1505 aa15.01□□□□□ -0.01
PPP4R1-212ENST00000579415 ABCC10Q5T3U5 1492 aa15.01□□□□□ -0.01
PPP4R1-212ENST00000579415 KIF13AQ9H1H9 1805 aa15□□□□□ -0.01
PPP4R1-212ENST00000579415 GRIN2AQ12879 1464 aa15□□□□□ -0.01
PPP4R1-212ENST00000579415 NUP160Q12769 1436 aa15□□□□□ -0.01
PPP4R1-212ENST00000579415 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
PPP4R1-212ENST00000579415 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
PPP4R1-212ENST00000579415 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
PPP4R1-212ENST00000579415 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
PPP4R1-212ENST00000579415 PRG4Q92954 1404 aaPredicted RBP14.92□□□□□ -0.02
PPP4R1-212ENST00000579415 KDM6BO15054 1643 aa14.91□□□□□ -0.02
PPP4R1-212ENST00000579415 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
PPP4R1-212ENST00000579415 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
PPP4R1-212ENST00000579415 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms