RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
CSNK1D-209ENST00000578904 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
CSNK1D-209ENST00000578904 FANCAO15360 1455 aa21.35■■□□□ 1.01
CSNK1D-209ENST00000578904 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
CSNK1D-209ENST00000578904 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
CSNK1D-209ENST00000578904 NEO1Q92859 1461 aa21.32■■□□□ 1
CSNK1D-209ENST00000578904 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
CSNK1D-209ENST00000578904 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
CSNK1D-209ENST00000578904 EFCAB2Q5VUJ9 269 aa21.3■■□□□ 1
CSNK1D-209ENST00000578904 CFDP1Q9UEE9 299 aaPredicted RBP21.3■■□□□ 1
CSNK1D-209ENST00000578904 AKNAQ7Z591 1439 aa21.28■■□□□ 1
CSNK1D-209ENST00000578904 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-209ENST00000578904 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
CSNK1D-209ENST00000578904 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
CSNK1D-209ENST00000578904 ABCC1P33527 1531 aa21.24■□□□□ 0.99
CSNK1D-209ENST00000578904 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
CSNK1D-209ENST00000578904 KDM6BO15054 1643 aa21.24■□□□□ 0.99
CSNK1D-209ENST00000578904 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
CSNK1D-209ENST00000578904 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
CSNK1D-209ENST00000578904 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
CSNK1D-209ENST00000578904 ILDR1Q86SU0 546 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-209ENST00000578904 SYCP2Q9BX26 1530 aa21.2■□□□□ 0.98
CSNK1D-209ENST00000578904 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.98
CSNK1D-209ENST00000578904 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
CSNK1D-209ENST00000578904 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-209ENST00000578904 KDM4FA0A1W2PPD8 638 aa21.18■□□□□ 0.98
CSNK1D-209ENST00000578904 ZNF644Q9H582 1327 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-209ENST00000578904 COL17A1Q9UMD9 1497 aaPredicted RBP21.17■□□□□ 0.98
CSNK1D-209ENST00000578904 POGZQ7Z3K3 1410 aa21.16■□□□□ 0.98
CSNK1D-209ENST00000578904 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
CSNK1D-209ENST00000578904 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
CSNK1D-209ENST00000578904 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
CSNK1D-209ENST00000578904 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.98
CSNK1D-209ENST00000578904 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.97
CSNK1D-209ENST00000578904 RICTORQ6R327 1708 aa21.14■□□□□ 0.97
CSNK1D-209ENST00000578904 ZNF518AQ6AHZ1 1483 aa21.13■□□□□ 0.97
CSNK1D-209ENST00000578904 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
CSNK1D-209ENST00000578904 RAPGEF3O95398 923 aa21.12■□□□□ 0.97
CSNK1D-209ENST00000578904 HNRNPMP52272 730 aaKnown RBP eCLIP21.12■□□□□ 0.974e-7■■■□□ 15
CSNK1D-209ENST00000578904 TRAPPC8Q9Y2L5 1435 aa21.12■□□□□ 0.97
CSNK1D-209ENST00000578904 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
CSNK1D-209ENST00000578904 FAM50AQ14320 339 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-209ENST00000578904 ARHGEF5Q12774 1597 aa21.1■□□□□ 0.97
CSNK1D-209ENST00000578904 CCDC141Q6ZP82 1450 aa21.09■□□□□ 0.97
CSNK1D-209ENST00000578904 KDM5CP41229 1560 aa21.08■□□□□ 0.97
CSNK1D-209ENST00000578904 ZMYM4Q5VZL5 1548 aa21.08■□□□□ 0.96
CSNK1D-209ENST00000578904 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
CSNK1D-209ENST00000578904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.07■□□□□ 0.965e-16■■■■■ 38.2
CSNK1D-209ENST00000578904 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
CSNK1D-209ENST00000578904 HECW2Q9P2P5 1572 aa21.05■□□□□ 0.96
CSNK1D-209ENST00000578904 RSPH4AQ5TD94 716 aa21.04■□□□□ 0.96
CSNK1D-209ENST00000578904 DAPK1P53355 1430 aa21.03■□□□□ 0.96
CSNK1D-209ENST00000578904 CROCC2H7BZ55 1655 aa21.02■□□□□ 0.96
CSNK1D-209ENST00000578904 MYT1LQ9UL68 1186 aa21.02■□□□□ 0.96
CSNK1D-209ENST00000578904 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
CSNK1D-209ENST00000578904 ZFYVE16Q7Z3T8 1539 aa21.01■□□□□ 0.95
CSNK1D-209ENST00000578904 ABCC5O15440 1437 aa21.01■□□□□ 0.95
CSNK1D-209ENST00000578904 INO80Q9ULG1 1556 aaPredicted RBP21.01■□□□□ 0.95
CSNK1D-209ENST00000578904 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
CSNK1D-209ENST00000578904 MLH3Q9UHC1 1453 aa21.01■□□□□ 0.95
CSNK1D-209ENST00000578904 ATP7AQ04656 1500 aa21■□□□□ 0.95
CSNK1D-209ENST00000578904 SHANK2Q9UPX8 1470 aa21■□□□□ 0.95
CSNK1D-209ENST00000578904 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
CSNK1D-209ENST00000578904 TSPY4P0CV99 314 aa20.99■□□□□ 0.95
CSNK1D-209ENST00000578904 TSPY10P0CW01 314 aa20.99■□□□□ 0.95
CSNK1D-209ENST00000578904 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
CSNK1D-209ENST00000578904 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
CSNK1D-209ENST00000578904 KIDINS220Q9ULH0 1771 aa20.97■□□□□ 0.95
CSNK1D-209ENST00000578904 YEATS2Q9ULM3 1422 aa20.96■□□□□ 0.95
CSNK1D-209ENST00000578904 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.95
CSNK1D-209ENST00000578904 ABCA6Q8N139 1617 aa20.95■□□□□ 0.94
CSNK1D-209ENST00000578904 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
CSNK1D-209ENST00000578904 ITGAEP38570 1179 aa20.94■□□□□ 0.94
CSNK1D-209ENST00000578904 ADGBQ8N7X0 1667 aa20.92■□□□□ 0.94
CSNK1D-209ENST00000578904 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
CSNK1D-209ENST00000578904 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
CSNK1D-209ENST00000578904 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
CSNK1D-209ENST00000578904 ATP10AO60312 1499 aa20.89■□□□□ 0.94
CSNK1D-209ENST00000578904 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
CSNK1D-209ENST00000578904 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
CSNK1D-209ENST00000578904 REREQ9P2R6 1566 aa20.85■□□□□ 0.93
CSNK1D-209ENST00000578904 A2MP01023 1474 aa20.85■□□□□ 0.93
CSNK1D-209ENST00000578904 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
CSNK1D-209ENST00000578904 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
CSNK1D-209ENST00000578904 RRP7BPQ9NSQ0 103 aa20.83■□□□□ 0.93
CSNK1D-209ENST00000578904 NCOA1Q15788 1441 aa20.83■□□□□ 0.93
CSNK1D-209ENST00000578904 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
CSNK1D-209ENST00000578904 DHX29Q7Z478 1369 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-209ENST00000578904 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
CSNK1D-209ENST00000578904 ARID4BQ4LE39 1312 aaPredicted RBP20.78■□□□□ 0.92
CSNK1D-209ENST00000578904 AGLP35573 1532 aa20.78■□□□□ 0.92
CSNK1D-209ENST00000578904 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
CSNK1D-209ENST00000578904 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
CSNK1D-209ENST00000578904 GCC2Q8IWJ2 1684 aa20.75■□□□□ 0.91
CSNK1D-209ENST00000578904 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-209ENST00000578904 HFM1A2PYH4 1435 aa20.73■□□□□ 0.91
CSNK1D-209ENST00000578904 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
CSNK1D-209ENST00000578904 BCORL1Q5H9F3 1711 aa20.72■□□□□ 0.91
CSNK1D-209ENST00000578904 NAIPQ13075 1403 aa20.71■□□□□ 0.91
CSNK1D-209ENST00000578904 SETD5Q9C0A6 1442 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms