RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 SETD1BQ9UPS6 1966 aaKnown RBP11.02□□□□□ -0.65
UBB-208ENST00000578706 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
UBB-208ENST00000578706 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
UBB-208ENST00000578706 C3P01024 1663 aa10.99□□□□□ -0.65
UBB-208ENST00000578706 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
UBB-208ENST00000578706 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
UBB-208ENST00000578706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBB-208ENST00000578706 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.65
UBB-208ENST00000578706 ATP10AO60312 1499 aa10.95□□□□□ -0.66
UBB-208ENST00000578706 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
UBB-208ENST00000578706 C9orf84Q5VXU9 1444 aa10.95□□□□□ -0.66
UBB-208ENST00000578706 ZNF335Q9H4Z2 1342 aaPredicted RBP10.94□□□□□ -0.66
UBB-208ENST00000578706 HSPA1LP34931 641 aa10.93□□□□□ -0.66
UBB-208ENST00000578706 SAMD9Q5K651 1589 aa10.93□□□□□ -0.66
UBB-208ENST00000578706 CAMSAP1Q5T5Y3 1602 aa10.91□□□□□ -0.66
UBB-208ENST00000578706 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
UBB-208ENST00000578706 SCAPERQ9BY12 1400 aa10.9□□□□□ -0.66
UBB-208ENST00000578706 ALKQ9UM73 1620 aa10.88□□□□□ -0.67
UBB-208ENST00000578706 DIP2CQ9Y2E4 1556 aa10.88□□□□□ -0.67
UBB-208ENST00000578706 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
UBB-208ENST00000578706 REREQ9P2R6 1566 aa10.87□□□□□ -0.67
UBB-208ENST00000578706 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
UBB-208ENST00000578706 KDM5CP41229 1560 aa10.86□□□□□ -0.67
UBB-208ENST00000578706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
UBB-208ENST00000578706 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
UBB-208ENST00000578706 ABCA6Q8N139 1617 aa10.86□□□□□ -0.67
UBB-208ENST00000578706 NCKAP5LQ9HCH0 1330 aa10.85□□□□□ -0.67
UBB-208ENST00000578706 TCOF1Q13428 1488 aaKnown RBP10.84□□□□□ -0.67
UBB-208ENST00000578706 ZNF142P52746 1687 aaPredicted RBP10.84□□□□□ -0.67
UBB-208ENST00000578706 PLCH2O75038 1416 aa10.84□□□□□ -0.67
UBB-208ENST00000578706 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
UBB-208ENST00000578706 RGS17Q9UGC6 210 aaPredicted RBP10.83□□□□□ -0.68
UBB-208ENST00000578706 AGLP35573 1532 aa10.83□□□□□ -0.68
UBB-208ENST00000578706 PLA2R1Q13018 1463 aa10.82□□□□□ -0.68
UBB-208ENST00000578706 PIP4K2BP78356 416 aa10.82□□□□□ -0.68
UBB-208ENST00000578706 MYO3AQ8NEV4 1616 aa10.82□□□□□ -0.68
UBB-208ENST00000578706 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
UBB-208ENST00000578706 SCAF1Q9H7N4 1312 aaKnown RBP10.81□□□□□ -0.68
UBB-208ENST00000578706 SUPT6HQ7KZ85 1726 aaKnown RBP10.81□□□□□ -0.68
UBB-208ENST00000578706 MYO5CQ9NQX4 1742 aa10.81□□□□□ -0.68
UBB-208ENST00000578706 ZNF518AQ6AHZ1 1483 aa10.81□□□□□ -0.68
UBB-208ENST00000578706 MROH2AA6NES4 1674 aa10.8□□□□□ -0.68
UBB-208ENST00000578706 NPATQ14207 1427 aa10.8□□□□□ -0.68
UBB-208ENST00000578706 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
UBB-208ENST00000578706 CEP170BQ9Y4F5 1589 aaPredicted RBP10.78□□□□□ -0.68
UBB-208ENST00000578706 AFAP1Q8N556 730 aa10.77□□□□□ -0.69
UBB-208ENST00000578706 SETD1AO15047 1707 aaKnown RBP10.77□□□□□ -0.69
UBB-208ENST00000578706 NEURL4Q96JN8 1562 aa10.77□□□□□ -0.69
UBB-208ENST00000578706 CNTLNQ9NXG0 1405 aa10.76□□□□□ -0.69
UBB-208ENST00000578706 CPS1P31327 1500 aa10.76□□□□□ -0.69
UBB-208ENST00000578706 FAM9AQ8IZU1 332 aaPredicted RBP10.76□□□□□ -0.69
UBB-208ENST00000578706 KIF14Q15058 1648 aa10.76□□□□□ -0.69
UBB-208ENST00000578706 MLH3Q9UHC1 1453 aa10.75□□□□□ -0.69
UBB-208ENST00000578706 TOM1O60784 492 aa10.75□□□□□ -0.69
UBB-208ENST00000578706 PKD2Q13563 968 aa10.75□□□□□ -0.69
UBB-208ENST00000578706 KIDINS220Q9ULH0 1771 aa10.75□□□□□ -0.69
UBB-208ENST00000578706 PPP6R1Q9UPN7 881 aa10.74□□□□□ -0.69
UBB-208ENST00000578706 POLR1AO95602 1720 aaPredicted RBP10.74□□□□□ -0.69
UBB-208ENST00000578706 SHANK2Q9UPX8 1470 aa10.74□□□□□ -0.69
UBB-208ENST00000578706 VWDEQ8N2E2 1590 aa10.73□□□□□ -0.69
UBB-208ENST00000578706 CLTCQ00610 1675 aaKnown RBP10.73□□□□□ -0.69
UBB-208ENST00000578706 EFCAB2Q5VUJ9 269 aa10.72□□□□□ -0.69
UBB-208ENST00000578706 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
UBB-208ENST00000578706 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
UBB-208ENST00000578706 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
UBB-208ENST00000578706 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
UBB-208ENST00000578706 ARHGAP5Q13017 1502 aa10.71□□□□□ -0.69
UBB-208ENST00000578706 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
UBB-208ENST00000578706 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
UBB-208ENST00000578706 ITSN2Q9NZM3 1697 aa10.7□□□□□ -0.7
UBB-208ENST00000578706 ESF1Q9H501 851 aaKnown RBP10.7□□□□□ -0.7
UBB-208ENST00000578706 SRCAPQ6ZRS2 3230 aa10.7□□□□□ -0.7
UBB-208ENST00000578706 ABCC1P33527 1531 aa10.69□□□□□ -0.7
UBB-208ENST00000578706 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
UBB-208ENST00000578706 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
UBB-208ENST00000578706 A2ML1A8K2U0 1454 aa10.67□□□□□ -0.7
UBB-208ENST00000578706 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
UBB-208ENST00000578706 PLXNC1O60486 1568 aa10.65□□□□□ -0.7
UBB-208ENST00000578706 PREX2Q70Z35 1606 aa10.65□□□□□ -0.7
UBB-208ENST00000578706 LRRC7Q96NW7 1537 aa10.64□□□□□ -0.71
UBB-208ENST00000578706 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
UBB-208ENST00000578706 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
UBB-208ENST00000578706 SAMD9LQ8IVG5 1584 aa10.63□□□□□ -0.71
UBB-208ENST00000578706 SYNMO15061 1565 aa10.62□□□□□ -0.71
UBB-208ENST00000578706 XIRP1Q702N8 1843 aaKnown RBP10.61□□□□□ -0.71
UBB-208ENST00000578706 TROQ12816 1431 aaPredicted RBP10.61□□□□□ -0.71
UBB-208ENST00000578706 DEPDC5O75140 1603 aa10.6□□□□□ -0.71
UBB-208ENST00000578706 MED14O60244 1454 aa10.6□□□□□ -0.71
UBB-208ENST00000578706 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
UBB-208ENST00000578706 INO80Q9ULG1 1556 aaPredicted RBP10.59□□□□□ -0.71
UBB-208ENST00000578706 CDC42BPAQ5VT25 1732 aa10.58□□□□□ -0.72
UBB-208ENST00000578706 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
UBB-208ENST00000578706 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBB-208ENST00000578706 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
UBB-208ENST00000578706 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
UBB-208ENST00000578706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBB-208ENST00000578706 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
UBB-208ENST00000578706 A2MP01023 1474 aa10.55□□□□□ -0.72
UBB-208ENST00000578706 TNRQ92752 1358 aa10.53□□□□□ -0.72
UBB-208ENST00000578706 FBXO31Q5XUX0 539 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms