RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 EMP3P54852 163 aa8.31□□□□□ -1.08
ERVFRD-3-201ENST00000578561 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
ERVFRD-3-201ENST00000578561 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
ERVFRD-3-201ENST00000578561 FBXO3Q9UK99 471 aa8.29□□□□□ -1.08
ERVFRD-3-201ENST00000578561 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
ERVFRD-3-201ENST00000578561 RAPGEF2Q9Y4G8 1499 aa8.28□□□□□ -1.08
ERVFRD-3-201ENST00000578561 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
ERVFRD-3-201ENST00000578561 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
ERVFRD-3-201ENST00000578561 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
ERVFRD-3-201ENST00000578561 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
ERVFRD-3-201ENST00000578561 PRDM2Q13029 1718 aa8.24□□□□□ -1.09
ERVFRD-3-201ENST00000578561 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
ERVFRD-3-201ENST00000578561 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
ERVFRD-3-201ENST00000578561 CLIP1P30622 1438 aa8.23□□□□□ -1.09
ERVFRD-3-201ENST00000578561 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
ERVFRD-3-201ENST00000578561 ERICH3Q5RHP9 1530 aa8.22□□□□□ -1.09
ERVFRD-3-201ENST00000578561 FAM205CA6NFA0 338 aa8.21□□□□□ -1.09
ERVFRD-3-201ENST00000578561 FANCD2Q9BXW9 1451 aa8.2□□□□□ -1.1
ERVFRD-3-201ENST00000578561 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
ERVFRD-3-201ENST00000578561 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
ERVFRD-3-201ENST00000578561 NESP48681 1621 aa8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 PYGBP11216 843 aa8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 FGD5Q6ZNL6 1462 aa8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 VPS8Q8N3P4 1428 aa8.19□□□□□ -1.1
ERVFRD-3-201ENST00000578561 IGF1RP08069 1367 aa8.18□□□□□ -1.1
ERVFRD-3-201ENST00000578561 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
ERVFRD-3-201ENST00000578561 PCDHB8Q9UN66 801 aa8.18□□□□□ -1.1
ERVFRD-3-201ENST00000578561 CUX2O14529 1486 aa8.17□□□□□ -1.1
ERVFRD-3-201ENST00000578561 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
ERVFRD-3-201ENST00000578561 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
ERVFRD-3-201ENST00000578561 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
ERVFRD-3-201ENST00000578561 ZEB1P37275 1124 aaPredicted RBP8.15□□□□□ -1.1
ERVFRD-3-201ENST00000578561 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
ERVFRD-3-201ENST00000578561 TTBK1Q5TCY1 1321 aaPredicted RBP8.15□□□□□ -1.11
ERVFRD-3-201ENST00000578561 ZNF467Q7Z7K2 595 aaPredicted RBP8.14□□□□□ -1.11
ERVFRD-3-201ENST00000578561 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
ERVFRD-3-201ENST00000578561 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
ERVFRD-3-201ENST00000578561 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.11
ERVFRD-3-201ENST00000578561 POLA1P09884 1462 aaPredicted RBP8.13□□□□□ -1.11
ERVFRD-3-201ENST00000578561 RAD54L2Q9Y4B4 1467 aa8.13□□□□□ -1.11
ERVFRD-3-201ENST00000578561 RANGAP1P46060 587 aaPredicted RBP8.12□□□□□ -1.11
ERVFRD-3-201ENST00000578561 CARMIL1Q5VZK9 1371 aa8.12□□□□□ -1.11
ERVFRD-3-201ENST00000578561 URB2Q14146 1524 aaKnown RBP8.11□□□□□ -1.11
ERVFRD-3-201ENST00000578561 ABCA10Q8WWZ4 1543 aa8.11□□□□□ -1.11
ERVFRD-3-201ENST00000578561 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
ERVFRD-3-201ENST00000578561 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
ERVFRD-3-201ENST00000578561 G3V3G9 751 aa8.1□□□□□ -1.11
ERVFRD-3-201ENST00000578561 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
ERVFRD-3-201ENST00000578561 ZNF710Q8N1W2 664 aa8.08□□□□□ -1.12
ERVFRD-3-201ENST00000578561 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
ERVFRD-3-201ENST00000578561 GSE1Q14687 1217 aa8.07□□□□□ -1.12
ERVFRD-3-201ENST00000578561 IFNLR1Q8IU57 520 aaPredicted RBP8.07□□□□□ -1.12
ERVFRD-3-201ENST00000578561 PDS5BQ9NTI5 1447 aa8.07□□□□□ -1.12
ERVFRD-3-201ENST00000578561 ERBB3P21860 1342 aa8.06□□□□□ -1.12
ERVFRD-3-201ENST00000578561 DOK7Q18PE1 504 aa8.06□□□□□ -1.12
ERVFRD-3-201ENST00000578561 KANK4Q5T7N3 995 aaPredicted RBP8.06□□□□□ -1.12
ERVFRD-3-201ENST00000578561 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
ERVFRD-3-201ENST00000578561 HOXB3P14651 431 aaPredicted RBP8.04□□□□□ -1.12
ERVFRD-3-201ENST00000578561 PSEN1P49768 467 aa8.04□□□□□ -1.12
ERVFRD-3-201ENST00000578561 ILDR1Q86SU0 546 aaPredicted RBP8.04□□□□□ -1.12
ERVFRD-3-201ENST00000578561 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
ERVFRD-3-201ENST00000578561 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
ERVFRD-3-201ENST00000578561 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
ERVFRD-3-201ENST00000578561 CHRM1P11229 460 aaPredicted RBP8.03□□□□□ -1.12
ERVFRD-3-201ENST00000578561 PTGER2P43116 358 aa8.03□□□□□ -1.12
ERVFRD-3-201ENST00000578561 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.12
ERVFRD-3-201ENST00000578561 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
ERVFRD-3-201ENST00000578561 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
ERVFRD-3-201ENST00000578561 ABCA5Q8WWZ7 1642 aa8.02□□□□□ -1.13
ERVFRD-3-201ENST00000578561 CUL7Q14999 1698 aa8□□□□□ -1.13
ERVFRD-3-201ENST00000578561 TARBP1Q13395 1621 aaKnown RBP8□□□□□ -1.13
ERVFRD-3-201ENST00000578561 GAPVD1Q14C86 1478 aa8□□□□□ -1.13
ERVFRD-3-201ENST00000578561 SPOCK2Q92563 424 aa8□□□□□ -1.13
ERVFRD-3-201ENST00000578561 MAP3K1Q13233 1512 aa7.99□□□□□ -1.13
ERVFRD-3-201ENST00000578561 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
ERVFRD-3-201ENST00000578561 PDAP1Q13442 181 aaKnown RBP7.99□□□□□ -1.13
ERVFRD-3-201ENST00000578561 MRC2Q9UBG0 1479 aa7.98□□□□□ -1.13
ERVFRD-3-201ENST00000578561 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
ERVFRD-3-201ENST00000578561 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
ERVFRD-3-201ENST00000578561 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
ERVFRD-3-201ENST00000578561 FHOD3Q2V2M9 1422 aa7.97□□□□□ -1.13
ERVFRD-3-201ENST00000578561 EFCAB5A4FU69 1503 aa7.96□□□□□ -1.14
ERVFRD-3-201ENST00000578561 P3H3Q8IVL6 736 aa7.96□□□□□ -1.14
ERVFRD-3-201ENST00000578561 ZSWIM6Q9HCJ5 1215 aa7.96□□□□□ -1.14
ERVFRD-3-201ENST00000578561 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
ERVFRD-3-201ENST00000578561 ZNF687Q8N1G0 1237 aa7.95□□□□□ -1.14
ERVFRD-3-201ENST00000578561 PCF11O94913 1555 aaKnown RBP7.95□□□□□ -1.14
ERVFRD-3-201ENST00000578561 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.14
ERVFRD-3-201ENST00000578561 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
ERVFRD-3-201ENST00000578561 CASKIN1Q8WXD9 1431 aa7.93□□□□□ -1.14
ERVFRD-3-201ENST00000578561 CABP2Q9NPB3 220 aa7.93□□□□□ -1.14
ERVFRD-3-201ENST00000578561 CTTNBP2Q8WZ74 1663 aa7.93□□□□□ -1.14
ERVFRD-3-201ENST00000578561 CCNB3Q8WWL7 1395 aa7.93□□□□□ -1.14
ERVFRD-3-201ENST00000578561 SAMD9Q5K651 1589 aa7.93□□□□□ -1.14
ERVFRD-3-201ENST00000578561 WDR62O43379 1518 aa7.92□□□□□ -1.14
ERVFRD-3-201ENST00000578561 FYCO1Q9BQS8 1478 aa7.92□□□□□ -1.14
ERVFRD-3-201ENST00000578561 PHLDB1Q86UU1 1377 aa7.92□□□□□ -1.14
ERVFRD-3-201ENST00000578561 SNAPC4Q5SXM2 1469 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms