RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
ERBB2-206ENST00000578373 KTN1Q86UP2 1357 aaKnown RBP15.57■□□□□ 0.08
ERBB2-206ENST00000578373 ZNF644Q9H582 1327 aaPredicted RBP15.57■□□□□ 0.08
ERBB2-206ENST00000578373 EXOC6Q8TAG9 804 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 SOX12O15370 315 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 CLUAP1Q96AJ1 413 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 IGF1RP08069 1367 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
ERBB2-206ENST00000578373 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
ERBB2-206ENST00000578373 KIF21BO75037 1637 aa15.55■□□□□ 0.08
ERBB2-206ENST00000578373 POGKQ9P215 609 aa15.55■□□□□ 0.08
ERBB2-206ENST00000578373 STK26Q9P289 416 aa15.55■□□□□ 0.08
ERBB2-206ENST00000578373 ERICH6BQ5W0A0 696 aa15.54■□□□□ 0.08
ERBB2-206ENST00000578373 GGT6Q6P531 493 aa15.54■□□□□ 0.08
ERBB2-206ENST00000578373 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
ERBB2-206ENST00000578373 TRIM44Q96DX7 344 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-206ENST00000578373 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
ERBB2-206ENST00000578373 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.08
ERBB2-206ENST00000578373 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.07
ERBB2-206ENST00000578373 RALBP1Q15311 655 aa15.51■□□□□ 0.07
ERBB2-206ENST00000578373 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
ERBB2-206ENST00000578373 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
ERBB2-206ENST00000578373 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
ERBB2-206ENST00000578373 TCERG1O14776 1098 aaKnown RBP15.5■□□□□ 0.07
ERBB2-206ENST00000578373 CCDC184Q52MB2 194 aa15.5■□□□□ 0.07
ERBB2-206ENST00000578373 WASHC2AQ641Q2 1341 aa15.5■□□□□ 0.07
ERBB2-206ENST00000578373 SRPK2P78362 688 aaKnown RBP15.5■□□□□ 0.07
ERBB2-206ENST00000578373 APBB1O00213 710 aa15.49■□□□□ 0.07
ERBB2-206ENST00000578373 PANK3Q9H999 370 aa15.49■□□□□ 0.07
ERBB2-206ENST00000578373 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
ERBB2-206ENST00000578373 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
ERBB2-206ENST00000578373 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
ERBB2-206ENST00000578373 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
ERBB2-206ENST00000578373 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
ERBB2-206ENST00000578373 BCL2L13Q9BXK5 485 aa15.48■□□□□ 0.07
ERBB2-206ENST00000578373 NAP1L5Q96NT1 182 aaPredicted RBP15.47■□□□□ 0.07
ERBB2-206ENST00000578373 DNAJC5BQ9UF47 199 aa15.47■□□□□ 0.07
ERBB2-206ENST00000578373 ANKRD30AQ9BXX3 1397 aa15.47■□□□□ 0.07
ERBB2-206ENST00000578373 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.07
ERBB2-206ENST00000578373 MLECQ14165 292 aa15.46■□□□□ 0.07
ERBB2-206ENST00000578373 PDE4AP27815 886 aa15.46■□□□□ 0.06
ERBB2-206ENST00000578373 KIF7Q2M1P5 1343 aa15.45■□□□□ 0.06
ERBB2-206ENST00000578373 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
ERBB2-206ENST00000578373 HSP90AB1P08238 724 aaKnown RBP15.44■□□□□ 0.06
ERBB2-206ENST00000578373 GOLGA2Q08379 1002 aa15.44■□□□□ 0.06
ERBB2-206ENST00000578373 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
ERBB2-206ENST00000578373 USP47Q96K76 1375 aa15.44■□□□□ 0.06
ERBB2-206ENST00000578373 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
ERBB2-206ENST00000578373 KIF3BO15066 747 aa15.42■□□□□ 0.06
ERBB2-206ENST00000578373 JPH4Q96JJ6 628 aa15.42■□□□□ 0.06
ERBB2-206ENST00000578373 GLIPR1L2Q4G1C9 344 aa15.42■□□□□ 0.06
ERBB2-206ENST00000578373 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
ERBB2-206ENST00000578373 PLCB2Q00722 1185 aa15.4■□□□□ 0.06
ERBB2-206ENST00000578373 MYBBP1AQ9BQG0 1328 aaKnown RBP15.4■□□□□ 0.06
ERBB2-206ENST00000578373 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 FGD6Q6ZV73 1430 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 A0A0G2JS52 829 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 ITPRIPQ8IWB1 547 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 CCDC7Q96M83 1385 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 TRAK1Q9UPV9 953 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
ERBB2-206ENST00000578373 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
ERBB2-206ENST00000578373 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
ERBB2-206ENST00000578373 PTMAP06454 111 aaKnown RBP15.38■□□□□ 0.05
ERBB2-206ENST00000578373 FGD5Q6ZNL6 1462 aa15.38■□□□□ 0.05
ERBB2-206ENST00000578373 LRRC9Q6ZRR7 1453 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 APAF1O14727 1248 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 NBPF8Q3BBV2 869 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
ERBB2-206ENST00000578373 HSCBQ8IWL3 235 aa15.36■□□□□ 0.05
ERBB2-206ENST00000578373 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
ERBB2-206ENST00000578373 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
ERBB2-206ENST00000578373 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
ERBB2-206ENST00000578373 COG6Q9Y2V7 657 aa15.35■□□□□ 0.05
ERBB2-206ENST00000578373 EFCAB2Q5VUJ9 269 aa15.35■□□□□ 0.05
ERBB2-206ENST00000578373 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-206ENST00000578373 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-206ENST00000578373 PDE3BQ13370 1112 aa15.34■□□□□ 0.05
ERBB2-206ENST00000578373 DNTTIP2Q5QJE6 756 aaKnown RBP15.33■□□□□ 0.05
ERBB2-206ENST00000578373 SMC4Q9NTJ3 1288 aa15.33■□□□□ 0.05
ERBB2-206ENST00000578373 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.05
ERBB2-206ENST00000578373 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
ERBB2-206ENST00000578373 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
ERBB2-206ENST00000578373 CENPJQ9HC77 1338 aaPredicted RBP15.32■□□□□ 0.04
ERBB2-206ENST00000578373 KANK1Q14678 1352 aa15.31■□□□□ 0.04
ERBB2-206ENST00000578373 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
ERBB2-206ENST00000578373 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
ERBB2-206ENST00000578373 MS4A1P11836 297 aa15.29■□□□□ 0.04
ERBB2-206ENST00000578373 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
ERBB2-206ENST00000578373 WDR97A6NE52 1622 aa15.29■□□□□ 0.04
ERBB2-206ENST00000578373 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
ERBB2-206ENST00000578373 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
ERBB2-206ENST00000578373 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
ERBB2-206ENST00000578373 ARID3AQ99856 593 aa15.28■□□□□ 0.04
ERBB2-206ENST00000578373 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-206ENST00000578373 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms