RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 APLP2Q06481 763 aa24.21■■□□□ 1.47
IFT20-206ENST00000578122 PLCH2O75038 1416 aa24.2■■□□□ 1.46
IFT20-206ENST00000578122 NEO1Q92859 1461 aa24.19■■□□□ 1.46
IFT20-206ENST00000578122 PHLDB1Q86UU1 1377 aa24.17■■□□□ 1.46
IFT20-206ENST00000578122 CFAP74Q9C0B2 1584 aa24.17■■□□□ 1.46
IFT20-206ENST00000578122 PPP4R3CPQ6ZMV5 832 aa24.17■■□□□ 1.46
IFT20-206ENST00000578122 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
IFT20-206ENST00000578122 ARAP3Q8WWN8 1544 aa24.16■■□□□ 1.46
IFT20-206ENST00000578122 FANCAO15360 1455 aa24.16■■□□□ 1.46
IFT20-206ENST00000578122 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
IFT20-206ENST00000578122 CDC42BPAQ5VT25 1732 aa24.15■■□□□ 1.46
IFT20-206ENST00000578122 SUPT6HQ7KZ85 1726 aaKnown RBP24.14■■□□□ 1.45
IFT20-206ENST00000578122 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.45
IFT20-206ENST00000578122 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
IFT20-206ENST00000578122 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
IFT20-206ENST00000578122 EFCAB2Q5VUJ9 269 aa24.13■■□□□ 1.45
IFT20-206ENST00000578122 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
IFT20-206ENST00000578122 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
IFT20-206ENST00000578122 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
IFT20-206ENST00000578122 GPATCH8Q9UKJ3 1502 aaKnown RBP24.1■■□□□ 1.45
IFT20-206ENST00000578122 NCOA2Q15596 1464 aa24.08■■□□□ 1.45
IFT20-206ENST00000578122 ITSN2Q9NZM3 1697 aa24.05■■□□□ 1.44
IFT20-206ENST00000578122 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
IFT20-206ENST00000578122 CFDP1Q9UEE9 299 aaPredicted RBP24.03■■□□□ 1.44
IFT20-206ENST00000578122 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
IFT20-206ENST00000578122 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
IFT20-206ENST00000578122 SCAPERQ9BY12 1400 aa24.01■■□□□ 1.43
IFT20-206ENST00000578122 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
IFT20-206ENST00000578122 RICTORQ6R327 1708 aa23.99■■□□□ 1.43
IFT20-206ENST00000578122 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
IFT20-206ENST00000578122 SAMD9LQ8IVG5 1584 aa23.97■■□□□ 1.43
IFT20-206ENST00000578122 ABCC1P33527 1531 aa23.96■■□□□ 1.43
IFT20-206ENST00000578122 POGZQ7Z3K3 1410 aa23.94■■□□□ 1.42
IFT20-206ENST00000578122 PLEKHH2Q8IVE3 1493 aa23.92■■□□□ 1.42
IFT20-206ENST00000578122 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
IFT20-206ENST00000578122 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
IFT20-206ENST00000578122 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
IFT20-206ENST00000578122 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
IFT20-206ENST00000578122 ZMYM4Q5VZL5 1548 aa23.89■■□□□ 1.41
IFT20-206ENST00000578122 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
IFT20-206ENST00000578122 ZNF518AQ6AHZ1 1483 aa23.88■■□□□ 1.41
IFT20-206ENST00000578122 TRAPPC8Q9Y2L5 1435 aa23.88■■□□□ 1.41
IFT20-206ENST00000578122 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
IFT20-206ENST00000578122 AFAP1Q8N556 730 aa23.88■■□□□ 1.41
IFT20-206ENST00000578122 CAMSAP2Q08AD1 1489 aa23.86■■□□□ 1.41
IFT20-206ENST00000578122 MIA2Q96PC5 1412 aa23.85■■□□□ 1.41
IFT20-206ENST00000578122 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
IFT20-206ENST00000578122 KDM5CP41229 1560 aa23.85■■□□□ 1.41
IFT20-206ENST00000578122 MAGI2Q86UL8 1455 aa23.83■■□□□ 1.41
IFT20-206ENST00000578122 ZFYVE16Q7Z3T8 1539 aa23.81■■□□□ 1.4
IFT20-206ENST00000578122 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
IFT20-206ENST00000578122 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
IFT20-206ENST00000578122 HECW2Q9P2P5 1572 aa23.8■■□□□ 1.4
IFT20-206ENST00000578122 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
IFT20-206ENST00000578122 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
IFT20-206ENST00000578122 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
IFT20-206ENST00000578122 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
IFT20-206ENST00000578122 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.4
IFT20-206ENST00000578122 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
IFT20-206ENST00000578122 ARHGEF5Q12774 1597 aa23.75■■□□□ 1.39
IFT20-206ENST00000578122 RSPH4AQ5TD94 716 aa23.75■■□□□ 1.39
IFT20-206ENST00000578122 KIDINS220Q9ULH0 1771 aa23.74■■□□□ 1.39
IFT20-206ENST00000578122 CCDC141Q6ZP82 1450 aa23.74■■□□□ 1.39
IFT20-206ENST00000578122 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
IFT20-206ENST00000578122 ATP10AO60312 1499 aa23.72■■□□□ 1.39
IFT20-206ENST00000578122 INO80Q9ULG1 1556 aaPredicted RBP23.7■■□□□ 1.38
IFT20-206ENST00000578122 DIP2CQ9Y2E4 1556 aa23.7■■□□□ 1.38
IFT20-206ENST00000578122 ATP7AQ04656 1500 aa23.7■■□□□ 1.38
IFT20-206ENST00000578122 ABCA6Q8N139 1617 aa23.7■■□□□ 1.38
IFT20-206ENST00000578122 CNKSR2Q8WXI2 1034 aa23.68■■□□□ 1.38
IFT20-206ENST00000578122 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
IFT20-206ENST00000578122 TSPY4P0CV99 314 aa23.67■■□□□ 1.38
IFT20-206ENST00000578122 TSPY10P0CW01 314 aa23.67■■□□□ 1.38
IFT20-206ENST00000578122 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
IFT20-206ENST00000578122 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
IFT20-206ENST00000578122 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
IFT20-206ENST00000578122 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.38
IFT20-206ENST00000578122 DNMT1P26358 1616 aaKnown RBP23.63■■□□□ 1.37
IFT20-206ENST00000578122 REREQ9P2R6 1566 aa23.62■■□□□ 1.37
IFT20-206ENST00000578122 ABCC5O15440 1437 aa23.62■■□□□ 1.37
IFT20-206ENST00000578122 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
IFT20-206ENST00000578122 MAST1Q9Y2H9 1570 aa23.61■■□□□ 1.37
IFT20-206ENST00000578122 DAPK1P53355 1430 aa23.61■■□□□ 1.37
IFT20-206ENST00000578122 ADGBQ8N7X0 1667 aa23.6■■□□□ 1.37
IFT20-206ENST00000578122 KDM4FA0A1W2PPD8 638 aa23.59■■□□□ 1.37
IFT20-206ENST00000578122 BCORL1Q5H9F3 1711 aa23.58■■□□□ 1.37
IFT20-206ENST00000578122 A2MP01023 1474 aa23.57■■□□□ 1.36
IFT20-206ENST00000578122 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
IFT20-206ENST00000578122 HOXD11P31277 338 aaPredicted RBP23.56■■□□□ 1.36
IFT20-206ENST00000578122 AGLP35573 1532 aa23.55■■□□□ 1.36
IFT20-206ENST00000578122 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.36
IFT20-206ENST00000578122 RRBP1Q9P2E9 1410 aaKnown RBP23.54■■□□□ 1.36
IFT20-206ENST00000578122 MLECQ14165 292 aa23.53■■□□□ 1.36
IFT20-206ENST00000578122 ADAMTSL3P82987 1691 aa23.53■■□□□ 1.36
IFT20-206ENST00000578122 PLXNC1O60486 1568 aa23.52■■□□□ 1.36
IFT20-206ENST00000578122 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
IFT20-206ENST00000578122 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
IFT20-206ENST00000578122 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
IFT20-206ENST00000578122 DCAF8L1A6NGE4 600 aa23.46■■□□□ 1.35
IFT20-206ENST00000578122 ITGAEP38570 1179 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms