RNA–Protein interactions for RNA: ENST00000576668.1

ABR-234, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-234ENST00000576668 TCOF1Q13428 1488 aaKnown RBP25.86■■□□□ 1.73
ABR-234ENST00000576668 CDC42BPBQ9Y5S2 1711 aa25.84■■□□□ 1.73
ABR-234ENST00000576668 KCNH8Q96L42 1107 aa25.82■■□□□ 1.72
ABR-234ENST00000576668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.72
ABR-234ENST00000576668 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
ABR-234ENST00000576668 CAMSAP2Q08AD1 1489 aa25.77■■□□□ 1.72
ABR-234ENST00000576668 MAP3K4Q9Y6R4 1608 aa25.77■■□□□ 1.72
ABR-234ENST00000576668 ARAP3Q8WWN8 1544 aa25.76■■□□□ 1.71
ABR-234ENST00000576668 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
ABR-234ENST00000576668 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
ABR-234ENST00000576668 ARHGAP5Q13017 1502 aa25.74■■□□□ 1.71
ABR-234ENST00000576668 PLCH2O75038 1416 aa25.74■■□□□ 1.71
ABR-234ENST00000576668 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
ABR-234ENST00000576668 KDM6BO15054 1643 aa25.71■■□□□ 1.71
ABR-234ENST00000576668 DNMT1P26358 1616 aaKnown RBP25.7■■□□□ 1.7
ABR-234ENST00000576668 ZNF644Q9H582 1327 aaPredicted RBP25.69■■□□□ 1.7
ABR-234ENST00000576668 TEX14Q8IWB6 1497 aa25.66■■□□□ 1.7
ABR-234ENST00000576668 CROCC2H7BZ55 1655 aa25.64■■□□□ 1.7
ABR-234ENST00000576668 PTPRKQ15262 1439 aa25.64■■□□□ 1.7
ABR-234ENST00000576668 CD109Q6YHK3 1445 aa25.63■■□□□ 1.69
ABR-234ENST00000576668 ABCC1P33527 1531 aa25.63■■□□□ 1.69
ABR-234ENST00000576668 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
ABR-234ENST00000576668 ZNF777Q9ULD5 760 aaPredicted RBP25.62■■□□□ 1.69
ABR-234ENST00000576668 SYCP2Q9BX26 1530 aa25.62■■□□□ 1.69
ABR-234ENST00000576668 DAPK1P53355 1430 aa25.62■■□□□ 1.69
ABR-234ENST00000576668 ITGAEP38570 1179 aa25.61■■□□□ 1.69
ABR-234ENST00000576668 FANCAO15360 1455 aa25.6■■□□□ 1.69
ABR-234ENST00000576668 ABCC5O15440 1437 aa25.6■■□□□ 1.69
ABR-234ENST00000576668 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
ABR-234ENST00000576668 CFAP74Q9C0B2 1584 aa25.59■■□□□ 1.69
ABR-234ENST00000576668 PLEKHH2Q8IVE3 1493 aa25.59■■□□□ 1.69
ABR-234ENST00000576668 ARHGEF12Q9NZN5 1544 aa25.57■■□□□ 1.68
ABR-234ENST00000576668 KIAA1107Q9UPP5 1409 aa25.56■■□□□ 1.68
ABR-234ENST00000576668 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
ABR-234ENST00000576668 COL17A1Q9UMD9 1497 aaPredicted RBP25.54■■□□□ 1.68
ABR-234ENST00000576668 SHANK2Q9UPX8 1470 aa25.54■■□□□ 1.68
ABR-234ENST00000576668 CCDC141Q6ZP82 1450 aa25.53■■□□□ 1.68
ABR-234ENST00000576668 ADGBQ8N7X0 1667 aa25.53■■□□□ 1.68
ABR-234ENST00000576668 AKNAQ7Z591 1439 aa25.5■■□□□ 1.67
ABR-234ENST00000576668 ADGRL1O94910 1474 aa25.49■■□□□ 1.67
ABR-234ENST00000576668 NEO1Q92859 1461 aa25.49■■□□□ 1.67
ABR-234ENST00000576668 GCC2Q8IWJ2 1684 aa25.48■■□□□ 1.67
ABR-234ENST00000576668 MAST1Q9Y2H9 1570 aa25.48■■□□□ 1.67
ABR-234ENST00000576668 HNRNPMP52272 730 aaKnown RBP eCLIP25.48■■□□□ 1.67
ABR-234ENST00000576668 ADGRL2O95490 1459 aa25.47■■□□□ 1.67
ABR-234ENST00000576668 HFM1A2PYH4 1435 aa25.46■■□□□ 1.67
ABR-234ENST00000576668 C9orf84Q5VXU9 1444 aa25.46■■□□□ 1.67
ABR-234ENST00000576668 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
ABR-234ENST00000576668 ROCK1Q13464 1354 aa25.44■■□□□ 1.66
ABR-234ENST00000576668 NAIPQ13075 1403 aa25.42■■□□□ 1.66
ABR-234ENST00000576668 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
ABR-234ENST00000576668 CHIC2Q9UKJ5 165 aa25.41■■□□□ 1.66
ABR-234ENST00000576668 SETD5Q9C0A6 1442 aa25.4■■□□□ 1.66
ABR-234ENST00000576668 RSPH4AQ5TD94 716 aa25.4■■□□□ 1.66
ABR-234ENST00000576668 ZFYVE16Q7Z3T8 1539 aa25.38■■□□□ 1.65
ABR-234ENST00000576668 PLXNC1O60486 1568 aa25.38■■□□□ 1.65
ABR-234ENST00000576668 INO80Q9ULG1 1556 aaPredicted RBP25.38■■□□□ 1.65
ABR-234ENST00000576668 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
ABR-234ENST00000576668 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
ABR-234ENST00000576668 RAB3GAP2Q9H2M9 1393 aa25.37■■□□□ 1.65
ABR-234ENST00000576668 AEBP2Q6ZN18 517 aaPredicted RBP25.37■■□□□ 1.65
ABR-234ENST00000576668 KDM5CP41229 1560 aa25.36■■□□□ 1.65
ABR-234ENST00000576668 RICTORQ6R327 1708 aa25.34■■□□□ 1.65
ABR-234ENST00000576668 ZNF518AQ6AHZ1 1483 aa25.34■■□□□ 1.65
ABR-234ENST00000576668 RRP7BPQ9NSQ0 103 aa25.34■■□□□ 1.65
ABR-234ENST00000576668 ANKRD30AQ9BXX3 1397 aa25.33■■□□□ 1.65
ABR-234ENST00000576668 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
ABR-234ENST00000576668 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
ABR-234ENST00000576668 FRMPD1Q5SYB0 1578 aa25.33■■□□□ 1.65
ABR-234ENST00000576668 DENND4BO75064 1496 aaPredicted RBP25.32■■□□□ 1.64
ABR-234ENST00000576668 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
ABR-234ENST00000576668 AFAP1Q8N556 730 aa25.3■■□□□ 1.64
ABR-234ENST00000576668 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
ABR-234ENST00000576668 HECW2Q9P2P5 1572 aa25.28■■□□□ 1.64
ABR-234ENST00000576668 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
ABR-234ENST00000576668 KIF15Q9NS87 1388 aa25.27■■□□□ 1.64
ABR-234ENST00000576668 SPAG9O60271 1321 aaKnown RBP25.26■■□□□ 1.63
ABR-234ENST00000576668 KDM4FA0A1W2PPD8 638 aa25.25■■□□□ 1.63
ABR-234ENST00000576668 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
ABR-234ENST00000576668 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
ABR-234ENST00000576668 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
ABR-234ENST00000576668 HRCP23327 699 aa25.22■■□□□ 1.63
ABR-234ENST00000576668 DUOX2Q9NRD8 1548 aa25.22■■□□□ 1.63
ABR-234ENST00000576668 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
ABR-234ENST00000576668 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
ABR-234ENST00000576668 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
ABR-234ENST00000576668 ERBINQ96RT1 1412 aa25.16■■□□□ 1.62
ABR-234ENST00000576668 DIP2CQ9Y2E4 1556 aa25.15■■□□□ 1.62
ABR-234ENST00000576668 UNC13BO14795 1591 aa25.13■■□□□ 1.61
ABR-234ENST00000576668 EIF2AK4Q9P2K8 1649 aaKnown RBP25.11■■□□□ 1.61
ABR-234ENST00000576668 KDM5DQ9BY66 1539 aa25.09■■□□□ 1.61
ABR-234ENST00000576668 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
ABR-234ENST00000576668 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
ABR-234ENST00000576668 A2MP01023 1474 aa25.08■■□□□ 1.6
ABR-234ENST00000576668 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
ABR-234ENST00000576668 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
ABR-234ENST00000576668 DEPDC5O75140 1603 aa25.06■■□□□ 1.6
ABR-234ENST00000576668 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
ABR-234ENST00000576668 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
ABR-234ENST00000576668 PZPP20742 1482 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms