RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
TRAP1-216ENST00000576335 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
TRAP1-216ENST00000576335 CFDP1Q9UEE9 299 aaPredicted RBP17.2■□□□□ 0.34
TRAP1-216ENST00000576335 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
TRAP1-216ENST00000576335 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
TRAP1-216ENST00000576335 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
TRAP1-216ENST00000576335 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
TRAP1-216ENST00000576335 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
TRAP1-216ENST00000576335 NEO1Q92859 1461 aa17.18■□□□□ 0.34
TRAP1-216ENST00000576335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRAP1-216ENST00000576335 FANCAO15360 1455 aa17.17■□□□□ 0.34
TRAP1-216ENST00000576335 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
TRAP1-216ENST00000576335 TCOF1Q13428 1488 aaKnown RBP17.16■□□□□ 0.34
TRAP1-216ENST00000576335 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
TRAP1-216ENST00000576335 PTPN23Q9H3S7 1636 aa17.14■□□□□ 0.33
TRAP1-216ENST00000576335 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
TRAP1-216ENST00000576335 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
TRAP1-216ENST00000576335 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
TRAP1-216ENST00000576335 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
TRAP1-216ENST00000576335 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
TRAP1-216ENST00000576335 ABCC1P33527 1531 aa17.1■□□□□ 0.33
TRAP1-216ENST00000576335 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
TRAP1-216ENST00000576335 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
TRAP1-216ENST00000576335 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
TRAP1-216ENST00000576335 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
TRAP1-216ENST00000576335 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
TRAP1-216ENST00000576335 KDM6BO15054 1643 aa17.06■□□□□ 0.32
TRAP1-216ENST00000576335 SYCP2Q9BX26 1530 aa17.05■□□□□ 0.32
TRAP1-216ENST00000576335 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
TRAP1-216ENST00000576335 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
TRAP1-216ENST00000576335 CCDC141Q6ZP82 1450 aa17.04■□□□□ 0.32
TRAP1-216ENST00000576335 SCAPERQ9BY12 1400 aa17.04■□□□□ 0.32
TRAP1-216ENST00000576335 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
TRAP1-216ENST00000576335 DENND4BO75064 1496 aaPredicted RBP17.03■□□□□ 0.32
TRAP1-216ENST00000576335 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
TRAP1-216ENST00000576335 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
TRAP1-216ENST00000576335 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.32
TRAP1-216ENST00000576335 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.31
TRAP1-216ENST00000576335 DAPK1P53355 1430 aa17.01■□□□□ 0.31
TRAP1-216ENST00000576335 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
TRAP1-216ENST00000576335 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
TRAP1-216ENST00000576335 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
TRAP1-216ENST00000576335 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
TRAP1-216ENST00000576335 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAP1-216ENST00000576335 KDM5CP41229 1560 aa16.98■□□□□ 0.31
TRAP1-216ENST00000576335 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
TRAP1-216ENST00000576335 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
TRAP1-216ENST00000576335 ABCC5O15440 1437 aa16.97■□□□□ 0.31
TRAP1-216ENST00000576335 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
TRAP1-216ENST00000576335 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.3
TRAP1-216ENST00000576335 MAGI2Q86UL8 1455 aa16.95■□□□□ 0.3
TRAP1-216ENST00000576335 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
TRAP1-216ENST00000576335 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
TRAP1-216ENST00000576335 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
TRAP1-216ENST00000576335 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
TRAP1-216ENST00000576335 ADGRL2O95490 1459 aa16.93■□□□□ 0.3
TRAP1-216ENST00000576335 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
TRAP1-216ENST00000576335 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
TRAP1-216ENST00000576335 FRMPD1Q5SYB0 1578 aa16.92■□□□□ 0.3
TRAP1-216ENST00000576335 INO80Q9ULG1 1556 aaPredicted RBP16.92■□□□□ 0.3
TRAP1-216ENST00000576335 ADGBQ8N7X0 1667 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 ANKRD30AQ9BXX3 1397 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
TRAP1-216ENST00000576335 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
TRAP1-216ENST00000576335 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
TRAP1-216ENST00000576335 ITGAEP38570 1179 aa16.88■□□□□ 0.29
TRAP1-216ENST00000576335 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
TRAP1-216ENST00000576335 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
TRAP1-216ENST00000576335 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
TRAP1-216ENST00000576335 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
TRAP1-216ENST00000576335 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
TRAP1-216ENST00000576335 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
TRAP1-216ENST00000576335 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
TRAP1-216ENST00000576335 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
TRAP1-216ENST00000576335 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
TRAP1-216ENST00000576335 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
TRAP1-216ENST00000576335 REREQ9P2R6 1566 aa16.82■□□□□ 0.28
TRAP1-216ENST00000576335 ERBINQ96RT1 1412 aa16.82■□□□□ 0.28
TRAP1-216ENST00000576335 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
TRAP1-216ENST00000576335 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
TRAP1-216ENST00000576335 ABCA6Q8N139 1617 aa16.8■□□□□ 0.28
TRAP1-216ENST00000576335 ATP10AO60312 1499 aa16.8■□□□□ 0.28
TRAP1-216ENST00000576335 NAIPQ13075 1403 aa16.79■□□□□ 0.28
TRAP1-216ENST00000576335 A2MP01023 1474 aa16.79■□□□□ 0.28
TRAP1-216ENST00000576335 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
TRAP1-216ENST00000576335 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
TRAP1-216ENST00000576335 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
TRAP1-216ENST00000576335 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
TRAP1-216ENST00000576335 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
TRAP1-216ENST00000576335 YEATS2Q9ULM3 1422 aa16.78■□□□□ 0.28
TRAP1-216ENST00000576335 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
TRAP1-216ENST00000576335 HRCP23327 699 aa16.76■□□□□ 0.27
TRAP1-216ENST00000576335 AGLP35573 1532 aa16.75■□□□□ 0.27
TRAP1-216ENST00000576335 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
TRAP1-216ENST00000576335 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
TRAP1-216ENST00000576335 RAB3GAP2Q9H2M9 1393 aa16.7■□□□□ 0.26
TRAP1-216ENST00000576335 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms