RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
ABR-228ENST00000574437 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
ABR-228ENST00000574437 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
ABR-228ENST00000574437 LRRIQ1Q96JM4 1722 aa20.48■□□□□ 0.87
ABR-228ENST00000574437 SUPT6HQ7KZ85 1726 aaKnown RBP20.45■□□□□ 0.86
ABR-228ENST00000574437 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
ABR-228ENST00000574437 BCL11AQ9H165 835 aa20.45■□□□□ 0.86
ABR-228ENST00000574437 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
ABR-228ENST00000574437 NUP160Q12769 1436 aa20.44■□□□□ 0.86
ABR-228ENST00000574437 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
ABR-228ENST00000574437 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
ABR-228ENST00000574437 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
ABR-228ENST00000574437 PLB1Q6P1J6 1458 aa20.42■□□□□ 0.86
ABR-228ENST00000574437 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
ABR-228ENST00000574437 KIAA0556O60303 1618 aa20.42■□□□□ 0.86
ABR-228ENST00000574437 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
ABR-228ENST00000574437 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
ABR-228ENST00000574437 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
ABR-228ENST00000574437 CNTLNQ9NXG0 1405 aa20.4■□□□□ 0.86
ABR-228ENST00000574437 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
ABR-228ENST00000574437 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
ABR-228ENST00000574437 DENND4BO75064 1496 aaPredicted RBP20.36■□□□□ 0.85
ABR-228ENST00000574437 CARMIL2Q6F5E8 1435 aa20.35■□□□□ 0.85
ABR-228ENST00000574437 SENP3-EIF4A1A0A087X0R7 540 aa20.35■□□□□ 0.85
ABR-228ENST00000574437 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
ABR-228ENST00000574437 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
ABR-228ENST00000574437 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
ABR-228ENST00000574437 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
ABR-228ENST00000574437 KDM6BO15054 1643 aa20.34■□□□□ 0.85
ABR-228ENST00000574437 FANCIQ9NVI1 1328 aa20.34■□□□□ 0.85
ABR-228ENST00000574437 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
ABR-228ENST00000574437 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
ABR-228ENST00000574437 ERICH6BQ5W0A0 696 aa20.3■□□□□ 0.84
ABR-228ENST00000574437 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
ABR-228ENST00000574437 CHD1O14646 1710 aa20.28■□□□□ 0.84
ABR-228ENST00000574437 NCOA1Q15788 1441 aa20.28■□□□□ 0.84
ABR-228ENST00000574437 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
ABR-228ENST00000574437 TCOF1Q13428 1488 aaKnown RBP20.28■□□□□ 0.84
ABR-228ENST00000574437 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
ABR-228ENST00000574437 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
ABR-228ENST00000574437 PTPRGP23470 1445 aa20.26■□□□□ 0.83
ABR-228ENST00000574437 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
ABR-228ENST00000574437 GCC2Q8IWJ2 1684 aa20.24■□□□□ 0.83
ABR-228ENST00000574437 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
ABR-228ENST00000574437 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
ABR-228ENST00000574437 AKNAQ7Z591 1439 aa20.22■□□□□ 0.83
ABR-228ENST00000574437 ERCC6L2Q5T890 1561 aa20.22■□□□□ 0.83
ABR-228ENST00000574437 PLEKHD1A6NEE1 506 aa20.22■□□□□ 0.83
ABR-228ENST00000574437 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
ABR-228ENST00000574437 DAPK1P53355 1430 aa20.19■□□□□ 0.82
ABR-228ENST00000574437 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
ABR-228ENST00000574437 ATP10BO94823 1461 aa20.16■□□□□ 0.82
ABR-228ENST00000574437 ABCC5O15440 1437 aa20.15■□□□□ 0.82
ABR-228ENST00000574437 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
ABR-228ENST00000574437 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
ABR-228ENST00000574437 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
ABR-228ENST00000574437 ROCK1Q13464 1354 aa20.11■□□□□ 0.81
ABR-228ENST00000574437 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
ABR-228ENST00000574437 PKD2Q13563 968 aa20.11■□□□□ 0.81
ABR-228ENST00000574437 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
ABR-228ENST00000574437 NBR1Q14596 966 aa20.1■□□□□ 0.81
ABR-228ENST00000574437 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
ABR-228ENST00000574437 USP47Q96K76 1375 aa20.1■□□□□ 0.81
ABR-228ENST00000574437 ABCA8O94911 1581 aa20.08■□□□□ 0.81
ABR-228ENST00000574437 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.8
ABR-228ENST00000574437 KIF14Q15058 1648 aa20.08■□□□□ 0.8
ABR-228ENST00000574437 NOP58Q9Y2X3 529 aaKnown RBP20.06■□□□□ 0.8
ABR-228ENST00000574437 SALL2Q9Y467 1007 aaPredicted RBP20.05■□□□□ 0.8
ABR-228ENST00000574437 SMG6Q86US8 1419 aaKnown RBP20.04■□□□□ 0.8
ABR-228ENST00000574437 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
ABR-228ENST00000574437 CARD11Q9BXL7 1154 aa20.03■□□□□ 0.8
ABR-228ENST00000574437 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
ABR-228ENST00000574437 PAK3O75914 559 aaPredicted RBP20.03■□□□□ 0.8
ABR-228ENST00000574437 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.79
ABR-228ENST00000574437 DNMT1P26358 1616 aaKnown RBP20.01■□□□□ 0.79
ABR-228ENST00000574437 DEKP35659 375 aaKnown RBP20.01■□□□□ 0.79
ABR-228ENST00000574437 PZPP20742 1482 aa20■□□□□ 0.79
ABR-228ENST00000574437 ANP32AP39687 249 aaKnown RBP20■□□□□ 0.79
ABR-228ENST00000574437 OSCARQ8IYS5 282 aa19.99■□□□□ 0.79
ABR-228ENST00000574437 PNISRQ8TF01 805 aaKnown RBP19.99■□□□□ 0.79
ABR-228ENST00000574437 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
ABR-228ENST00000574437 KIAA1107Q9UPP5 1409 aa19.98■□□□□ 0.79
ABR-228ENST00000574437 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
ABR-228ENST00000574437 ST20-MTHFSA0A0A6YYL1 179 aa19.96■□□□□ 0.79
ABR-228ENST00000574437 CAMSAP2Q08AD1 1489 aa19.95■□□□□ 0.78
ABR-228ENST00000574437 NUP155O75694 1391 aa19.95■□□□□ 0.78
ABR-228ENST00000574437 DCAF11Q8TEB1 546 aa19.94■□□□□ 0.78
ABR-228ENST00000574437 MYT1LQ9UL68 1186 aa19.94■□□□□ 0.78
ABR-228ENST00000574437 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
ABR-228ENST00000574437 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
ABR-228ENST00000574437 BCORL1Q5H9F3 1711 aa19.93■□□□□ 0.78
ABR-228ENST00000574437 ZBTB47Q9UFB7 747 aaPredicted RBP19.91■□□□□ 0.78
ABR-228ENST00000574437 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
ABR-228ENST00000574437 ANKRD50Q9ULJ7 1429 aa19.9■□□□□ 0.78
ABR-228ENST00000574437 RNF123Q5XPI4 1314 aa19.9■□□□□ 0.78
ABR-228ENST00000574437 IPO9Q96P70 1041 aaKnown RBP19.89■□□□□ 0.78
ABR-228ENST00000574437 KIF15Q9NS87 1388 aa19.89■□□□□ 0.77
ABR-228ENST00000574437 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
ABR-228ENST00000574437 ARID4BQ4LE39 1312 aaPredicted RBP19.88■□□□□ 0.77
ABR-228ENST00000574437 TSPY4P0CV99 314 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms