RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ARHGAP5Q13017 1502 aa36.55■■■■□ 3.44
ATPAF1-213ENST00000574428 ZNF644Q9H582 1327 aaPredicted RBP36.54■■■■□ 3.44
ATPAF1-213ENST00000574428 ZNF777Q9ULD5 760 aaPredicted RBP36.54■■■■□ 3.44
ATPAF1-213ENST00000574428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.53■■■■□ 3.44
ATPAF1-213ENST00000574428 DIP2BQ9P265 1576 aa36.53■■■■□ 3.44
ATPAF1-213ENST00000574428 CAMSAP2Q08AD1 1489 aa36.52■■■■□ 3.44
ATPAF1-213ENST00000574428 GLI2P10070 1586 aa36.49■■■■□ 3.43
ATPAF1-213ENST00000574428 ITGAEP38570 1179 aa36.48■■■■□ 3.43
ATPAF1-213ENST00000574428 ARAP3Q8WWN8 1544 aa36.47■■■■□ 3.43
ATPAF1-213ENST00000574428 CD109Q6YHK3 1445 aa36.46■■■■□ 3.43
ATPAF1-213ENST00000574428 SAMD9LQ8IVG5 1584 aa36.46■■■■□ 3.43
ATPAF1-213ENST00000574428 FAM69CQ0P6D2 419 aa36.45■■■■□ 3.43
ATPAF1-213ENST00000574428 MAP3K4Q9Y6R4 1608 aa36.43■■■■□ 3.42
ATPAF1-213ENST00000574428 EFCAB2Q5VUJ9 269 aa36.4■■■■□ 3.42
ATPAF1-213ENST00000574428 FANCAO15360 1455 aa36.38■■■■□ 3.41
ATPAF1-213ENST00000574428 KIF13AQ9H1H9 1805 aa36.37■■■■□ 3.41
ATPAF1-213ENST00000574428 DNMT1P26358 1616 aaKnown RBP36.34■■■■□ 3.41
ATPAF1-213ENST00000574428 SYCP2Q9BX26 1530 aa36.32■■■■□ 3.41
ATPAF1-213ENST00000574428 PTPRKQ15262 1439 aa36.32■■■■□ 3.4
ATPAF1-213ENST00000574428 DAPK1P53355 1430 aa36.31■■■■□ 3.4
ATPAF1-213ENST00000574428 PLEKHH2Q8IVE3 1493 aa36.3■■■■□ 3.4
ATPAF1-213ENST00000574428 ABCC1P33527 1531 aa36.3■■■■□ 3.4
ATPAF1-213ENST00000574428 HNRNPMP52272 730 aaKnown RBP eCLIP36.3■■■■□ 3.4
ATPAF1-213ENST00000574428 ABCC5O15440 1437 aa36.29■■■■□ 3.4
ATPAF1-213ENST00000574428 MBD5Q9P267 1494 aa36.27■■■■□ 3.4
ATPAF1-213ENST00000574428 CFAP74Q9C0B2 1584 aa36.27■■■■□ 3.4
ATPAF1-213ENST00000574428 ARHGEF12Q9NZN5 1544 aa36.26■■■■□ 3.4
ATPAF1-213ENST00000574428 KIAA1107Q9UPP5 1409 aa36.26■■■■□ 3.4
ATPAF1-213ENST00000574428 ARHGEF5Q12774 1597 aa36.25■■■■□ 3.39
ATPAF1-213ENST00000574428 TSPOAP1O95153 1857 aa36.24■■■■□ 3.39
ATPAF1-213ENST00000574428 AKNAQ7Z591 1439 aa36.23■■■■□ 3.39
ATPAF1-213ENST00000574428 CROCC2H7BZ55 1655 aa36.22■■■■□ 3.39
ATPAF1-213ENST00000574428 PPRC1Q5VV67 1664 aaKnown RBP36.21■■■■□ 3.39
ATPAF1-213ENST00000574428 ADGRL1O94910 1474 aa36.21■■■■□ 3.39
ATPAF1-213ENST00000574428 CHIC2Q9UKJ5 165 aa36.2■■■■□ 3.38
ATPAF1-213ENST00000574428 CCDC141Q6ZP82 1450 aa36.19■■■■□ 3.38
ATPAF1-213ENST00000574428 NEO1Q92859 1461 aa36.19■■■■□ 3.38
ATPAF1-213ENST00000574428 SCAPERQ9BY12 1400 aa36.15■■■■□ 3.38
ATPAF1-213ENST00000574428 TRAPPC8Q9Y2L5 1435 aa36.15■■■■□ 3.38
ATPAF1-213ENST00000574428 SHANK2Q9UPX8 1470 aa36.12■■■■□ 3.37
ATPAF1-213ENST00000574428 RSPH4AQ5TD94 716 aa36.12■■■■□ 3.37
ATPAF1-213ENST00000574428 TEX14Q8IWB6 1497 aa36.12■■■■□ 3.37
ATPAF1-213ENST00000574428 TRHP20396 242 aaPredicted RBP36.11■■■■□ 3.37
ATPAF1-213ENST00000574428 C9orf84Q5VXU9 1444 aa36.11■■■■□ 3.37
ATPAF1-213ENST00000574428 TSPY4P0CV99 314 aa36.08■■■■□ 3.37
ATPAF1-213ENST00000574428 TSPY10P0CW01 314 aa36.08■■■■□ 3.37
ATPAF1-213ENST00000574428 ADGBQ8N7X0 1667 aa36.08■■■■□ 3.37
ATPAF1-213ENST00000574428 AFAP1Q8N556 730 aa36.05■■■■□ 3.36
ATPAF1-213ENST00000574428 RRP7BPQ9NSQ0 103 aa36.05■■■■□ 3.36
ATPAF1-213ENST00000574428 ROCK1Q13464 1354 aa36.04■■■■□ 3.36
ATPAF1-213ENST00000574428 HFM1A2PYH4 1435 aa36.04■■■■□ 3.36
ATPAF1-213ENST00000574428 ADGRL2O95490 1459 aa36.03■■■■□ 3.36
ATPAF1-213ENST00000574428 MAST1Q9Y2H9 1570 aa36.02■■■■□ 3.36
ATPAF1-213ENST00000574428 POGZQ7Z3K3 1410 aa36.02■■■■□ 3.36
ATPAF1-213ENST00000574428 SETD5Q9C0A6 1442 aa36■■■■□ 3.35
ATPAF1-213ENST00000574428 NAIPQ13075 1403 aa36■■■■□ 3.35
ATPAF1-213ENST00000574428 NCOA1Q15788 1441 aa35.99■■■■□ 3.35
ATPAF1-213ENST00000574428 ZNF518AQ6AHZ1 1483 aa35.99■■■■□ 3.35
ATPAF1-213ENST00000574428 DENND4BO75064 1496 aaPredicted RBP35.98■■■■□ 3.35
ATPAF1-213ENST00000574428 ANKRD30AQ9BXX3 1397 aa35.98■■■■□ 3.35
ATPAF1-213ENST00000574428 GCC2Q8IWJ2 1684 aa35.98■■■■□ 3.35
ATPAF1-213ENST00000574428 SPAG9O60271 1321 aaKnown RBP35.95■■■■□ 3.35
ATPAF1-213ENST00000574428 RAB3GAP2Q9H2M9 1393 aa35.95■■■■□ 3.35
ATPAF1-213ENST00000574428 ZFYVE16Q7Z3T8 1539 aa35.93■■■■□ 3.34
ATPAF1-213ENST00000574428 RAPGEF3O95398 923 aa35.93■■■■□ 3.34
ATPAF1-213ENST00000574428 KDM5CP41229 1560 aa35.92■■■■□ 3.34
ATPAF1-213ENST00000574428 RICTORQ6R327 1708 aa35.92■■■■□ 3.34
ATPAF1-213ENST00000574428 INO80Q9ULG1 1556 aaPredicted RBP35.91■■■■□ 3.34
ATPAF1-213ENST00000574428 PLXNC1O60486 1568 aa35.9■■■■□ 3.34
ATPAF1-213ENST00000574428 ATP7AQ04656 1500 aa35.89■■■■□ 3.34
ATPAF1-213ENST00000574428 FRMPD1Q5SYB0 1578 aa35.88■■■■□ 3.33
ATPAF1-213ENST00000574428 RTEL1-TNFRSF6BF6WH68 1400 aa35.88■■■■□ 3.33
ATPAF1-213ENST00000574428 KIF15Q9NS87 1388 aa35.88■■■■□ 3.33
ATPAF1-213ENST00000574428 KDM6BO15054 1643 aa35.87■■■■□ 3.33
ATPAF1-213ENST00000574428 MYT1LQ9UL68 1186 aa35.84■■■■□ 3.33
ATPAF1-213ENST00000574428 HECW2Q9P2P5 1572 aa35.83■■■■□ 3.33
ATPAF1-213ENST00000574428 KIDINS220Q9ULH0 1771 aa35.82■■■■□ 3.33
ATPAF1-213ENST00000574428 COL17A1Q9UMD9 1497 aaPredicted RBP35.82■■■■□ 3.32
ATPAF1-213ENST00000574428 MLH3Q9UHC1 1453 aa35.8■■■■□ 3.32
ATPAF1-213ENST00000574428 ANKRD50Q9ULJ7 1429 aa35.77■■■■□ 3.32
ATPAF1-213ENST00000574428 ZMYM4Q5VZL5 1548 aa35.75■■■■□ 3.31
ATPAF1-213ENST00000574428 DUOX2Q9NRD8 1548 aa35.75■■■■□ 3.31
ATPAF1-213ENST00000574428 HRCP23327 699 aa35.74■■■■□ 3.31
ATPAF1-213ENST00000574428 ABCA6Q8N139 1617 aa35.7■■■■□ 3.31
ATPAF1-213ENST00000574428 YEATS2Q9ULM3 1422 aa35.66■■■■□ 3.3
ATPAF1-213ENST00000574428 DIP2CQ9Y2E4 1556 aa35.65■■■■□ 3.3
ATPAF1-213ENST00000574428 ERBINQ96RT1 1412 aa35.65■■■■□ 3.3
ATPAF1-213ENST00000574428 MAGI2Q86UL8 1455 aa35.63■■■■□ 3.29
ATPAF1-213ENST00000574428 A2MP01023 1474 aa35.6■■■■□ 3.29
ATPAF1-213ENST00000574428 CCER1Q8TC90 406 aaPredicted RBP35.6■■■■□ 3.29
ATPAF1-213ENST00000574428 TRIM52Q96A61 297 aa35.6■■■■□ 3.29
ATPAF1-213ENST00000574428 DHX57Q6P158 1386 aaKnown RBP35.59■■■■□ 3.29
ATPAF1-213ENST00000574428 DHX29Q7Z478 1369 aaKnown RBP35.59■■■■□ 3.29
ATPAF1-213ENST00000574428 EIF2AK4Q9P2K8 1649 aaKnown RBP35.52■■■■□ 3.28
ATPAF1-213ENST00000574428 ARHGEF40Q8TER5 1519 aa35.52■■■■□ 3.28
ATPAF1-213ENST00000574428 ACIN1Q9UKV3 1341 aaKnown RBP35.51■■■■□ 3.27
ATPAF1-213ENST00000574428 UNC13BO14795 1591 aa35.51■■■■□ 3.27
ATPAF1-213ENST00000574428 ATP10AO60312 1499 aa35.49■■■■□ 3.27
ATPAF1-213ENST00000574428 KIF3BO15066 747 aa35.46■■■■□ 3.27
ATPAF1-213ENST00000574428 NUP155O75694 1391 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms