RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 IGF1RP08069 1367 aa15.43■□□□□ 0.06
ABR-218ENST00000572585 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
ABR-218ENST00000572585 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
ABR-218ENST00000572585 NAIPQ13075 1403 aa15.41■□□□□ 0.06
ABR-218ENST00000572585 CUX1P39880 1505 aa15.4■□□□□ 0.06
ABR-218ENST00000572585 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
ABR-218ENST00000572585 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
ABR-218ENST00000572585 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
ABR-218ENST00000572585 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
ABR-218ENST00000572585 PTPN23Q9H3S7 1636 aa15.38■□□□□ 0.05
ABR-218ENST00000572585 FYCO1Q9BQS8 1478 aa15.38■□□□□ 0.05
ABR-218ENST00000572585 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
ABR-218ENST00000572585 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
ABR-218ENST00000572585 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
ABR-218ENST00000572585 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
ABR-218ENST00000572585 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
ABR-218ENST00000572585 ZNF326Q5BKZ1 582 aaKnown RBP15.36■□□□□ 0.05
ABR-218ENST00000572585 L1TD1Q5T7N2 865 aaKnown RBP15.34■□□□□ 0.05
ABR-218ENST00000572585 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
ABR-218ENST00000572585 AQRO60306 1485 aaKnown RBP eCLIP15.34■□□□□ 0.05
ABR-218ENST00000572585 FOXD1Q16676 465 aa15.32■□□□□ 0.04
ABR-218ENST00000572585 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
ABR-218ENST00000572585 NBPF8Q3BBV2 869 aa15.32■□□□□ 0.04
ABR-218ENST00000572585 KDM5BQ9UGL1 1544 aa15.32■□□□□ 0.04
ABR-218ENST00000572585 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
ABR-218ENST00000572585 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
ABR-218ENST00000572585 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
ABR-218ENST00000572585 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
ABR-218ENST00000572585 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
ABR-218ENST00000572585 FGD5Q6ZNL6 1462 aa15.3■□□□□ 0.04
ABR-218ENST00000572585 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
ABR-218ENST00000572585 RALBP1Q15311 655 aa15.29■□□□□ 0.04
ABR-218ENST00000572585 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
ABR-218ENST00000572585 ARID4BQ4LE39 1312 aaPredicted RBP15.28■□□□□ 0.04
ABR-218ENST00000572585 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
ABR-218ENST00000572585 HSP90AA1P07900 732 aaKnown RBP15.27■□□□□ 0.04
ABR-218ENST00000572585 CRBNQ96SW2 442 aa15.27■□□□□ 0.03
ABR-218ENST00000572585 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.03
ABR-218ENST00000572585 KIF15Q9NS87 1388 aa15.27■□□□□ 0.03
ABR-218ENST00000572585 BECN1Q14457 450 aa15.27■□□□□ 0.03
ABR-218ENST00000572585 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
ABR-218ENST00000572585 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
ABR-218ENST00000572585 BRD4O60885 1362 aaPredicted RBP15.26■□□□□ 0.03
ABR-218ENST00000572585 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
ABR-218ENST00000572585 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
ABR-218ENST00000572585 DHX29Q7Z478 1369 aaKnown RBP15.25■□□□□ 0.03
ABR-218ENST00000572585 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
ABR-218ENST00000572585 PLIN1O60240 522 aa15.24■□□□□ 0.03
ABR-218ENST00000572585 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
ABR-218ENST00000572585 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.24■□□□□ 0.03
ABR-218ENST00000572585 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
ABR-218ENST00000572585 PDS5BQ9NTI5 1447 aa15.23■□□□□ 0.03
ABR-218ENST00000572585 USP47Q96K76 1375 aa15.23■□□□□ 0.03
ABR-218ENST00000572585 NESP48681 1621 aa15.23■□□□□ 0.03
ABR-218ENST00000572585 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
ABR-218ENST00000572585 RGS3P49796 1198 aa15.22■□□□□ 0.03
ABR-218ENST00000572585 DCAF11Q8TEB1 546 aa15.21■□□□□ 0.03
ABR-218ENST00000572585 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
ABR-218ENST00000572585 ARXQ96QS3 562 aa15.21■□□□□ 0.02
ABR-218ENST00000572585 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
ABR-218ENST00000572585 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
ABR-218ENST00000572585 SPATA31E1Q6ZUB1 1445 aa15.2■□□□□ 0.02
ABR-218ENST00000572585 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
ABR-218ENST00000572585 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
ABR-218ENST00000572585 RRP9O43818 475 aaKnown RBP15.19■□□□□ 0.02
ABR-218ENST00000572585 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
ABR-218ENST00000572585 ANKRD30BQ9BXX2 1392 aa15.18■□□□□ 0.02
ABR-218ENST00000572585 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
ABR-218ENST00000572585 CFTRP13569 1480 aa15.18■□□□□ 0.02
ABR-218ENST00000572585 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
ABR-218ENST00000572585 CDCA7LQ96GN5 454 aa15.16■□□□□ 0.02
ABR-218ENST00000572585 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
ABR-218ENST00000572585 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
ABR-218ENST00000572585 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
ABR-218ENST00000572585 POGKQ9P215 609 aa15.15■□□□□ 0.02
ABR-218ENST00000572585 ABCA5Q8WWZ7 1642 aa15.15■□□□□ 0.02
ABR-218ENST00000572585 RRAGDQ9NQL2 400 aaPredicted RBP15.15■□□□□ 0.02
ABR-218ENST00000572585 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
ABR-218ENST00000572585 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
ABR-218ENST00000572585 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
ABR-218ENST00000572585 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
ABR-218ENST00000572585 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
ABR-218ENST00000572585 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
ABR-218ENST00000572585 CLCN1P35523 988 aa15.08■□□□□ 0
ABR-218ENST00000572585 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
ABR-218ENST00000572585 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0
ABR-218ENST00000572585 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
ABR-218ENST00000572585 ST20-MTHFSA0A0A6YYL1 179 aa15.06■□□□□ 0
ABR-218ENST00000572585 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
ABR-218ENST00000572585 SNAPC4Q5SXM2 1469 aa15.05■□□□□ 0
ABR-218ENST00000572585 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
ABR-218ENST00000572585 WDR43Q15061 677 aaKnown RBP eCLIP15.05■□□□□ -0
ABR-218ENST00000572585 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
ABR-218ENST00000572585 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
ABR-218ENST00000572585 GCC2Q8IWJ2 1684 aa15.04■□□□□ -0
ABR-218ENST00000572585 TCOF1Q13428 1488 aaKnown RBP15.04■□□□□ -0
ABR-218ENST00000572585 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
ABR-218ENST00000572585 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
ABR-218ENST00000572585 PKD2Q13563 968 aa15.02■□□□□ -0
ABR-218ENST00000572585 POLR1AO95602 1720 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms