RNA–Protein interactions for RNA: ENST00000572298.5

TOM1L1-211, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-211ENST00000572298 FANCAO15360 1455 aa13.95□□□□□ -0.18
TOM1L1-211ENST00000572298 KDM6BO15054 1643 aa13.95□□□□□ -0.18
TOM1L1-211ENST00000572298 TTC37Q6PGP7 1564 aa13.95□□□□□ -0.18
TOM1L1-211ENST00000572298 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
TOM1L1-211ENST00000572298 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
TOM1L1-211ENST00000572298 AKNAQ7Z591 1439 aa13.93□□□□□ -0.18
TOM1L1-211ENST00000572298 LRRC9Q6ZRR7 1453 aa13.93□□□□□ -0.18
TOM1L1-211ENST00000572298 MYO5CQ9NQX4 1742 aa13.93□□□□□ -0.18
TOM1L1-211ENST00000572298 CFDP1Q9UEE9 299 aaPredicted RBP13.92□□□□□ -0.18
TOM1L1-211ENST00000572298 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
TOM1L1-211ENST00000572298 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
TOM1L1-211ENST00000572298 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
TOM1L1-211ENST00000572298 GPATCH8Q9UKJ3 1502 aaKnown RBP13.89□□□□□ -0.19
TOM1L1-211ENST00000572298 DENND4BO75064 1496 aaPredicted RBP13.88□□□□□ -0.19
TOM1L1-211ENST00000572298 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
TOM1L1-211ENST00000572298 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
TOM1L1-211ENST00000572298 COL17A1Q9UMD9 1497 aaPredicted RBP13.87□□□□□ -0.19
TOM1L1-211ENST00000572298 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
TOM1L1-211ENST00000572298 SCAPERQ9BY12 1400 aa13.87□□□□□ -0.19
TOM1L1-211ENST00000572298 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
TOM1L1-211ENST00000572298 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
TOM1L1-211ENST00000572298 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
TOM1L1-211ENST00000572298 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
TOM1L1-211ENST00000572298 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
TOM1L1-211ENST00000572298 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
TOM1L1-211ENST00000572298 ITSN2Q9NZM3 1697 aa13.84□□□□□ -0.19
TOM1L1-211ENST00000572298 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
TOM1L1-211ENST00000572298 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
TOM1L1-211ENST00000572298 POGZQ7Z3K3 1410 aa13.81□□□□□ -0.2
TOM1L1-211ENST00000572298 MIA2Q96PC5 1412 aa13.81□□□□□ -0.2
TOM1L1-211ENST00000572298 MAGI2Q86UL8 1455 aa13.8□□□□□ -0.2
TOM1L1-211ENST00000572298 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
TOM1L1-211ENST00000572298 MYOM3Q5VTT5 1437 aa13.8□□□□□ -0.2
TOM1L1-211ENST00000572298 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.2
TOM1L1-211ENST00000572298 AFAP1Q8N556 730 aa13.79□□□□□ -0.2
TOM1L1-211ENST00000572298 ABCC1P33527 1531 aa13.78□□□□□ -0.2
TOM1L1-211ENST00000572298 RICTORQ6R327 1708 aa13.77□□□□□ -0.21
TOM1L1-211ENST00000572298 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
TOM1L1-211ENST00000572298 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
TOM1L1-211ENST00000572298 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
TOM1L1-211ENST00000572298 SPAG9O60271 1321 aaKnown RBP13.75□□□□□ -0.21
TOM1L1-211ENST00000572298 TSPY4P0CV99 314 aa13.75□□□□□ -0.21
TOM1L1-211ENST00000572298 TSPY10P0CW01 314 aa13.75□□□□□ -0.21
TOM1L1-211ENST00000572298 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
TOM1L1-211ENST00000572298 TRAPPC8Q9Y2L5 1435 aa13.74□□□□□ -0.21
TOM1L1-211ENST00000572298 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
TOM1L1-211ENST00000572298 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
TOM1L1-211ENST00000572298 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
TOM1L1-211ENST00000572298 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
TOM1L1-211ENST00000572298 KDM5CP41229 1560 aa13.73□□□□□ -0.21
TOM1L1-211ENST00000572298 ZFYVE16Q7Z3T8 1539 aa13.72□□□□□ -0.21
TOM1L1-211ENST00000572298 MBD5Q9P267 1494 aa13.72□□□□□ -0.21
TOM1L1-211ENST00000572298 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
TOM1L1-211ENST00000572298 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
TOM1L1-211ENST00000572298 ATP10AO60312 1499 aa13.71□□□□□ -0.21
TOM1L1-211ENST00000572298 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
TOM1L1-211ENST00000572298 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
TOM1L1-211ENST00000572298 RTEL1-TNFRSF6BF6WH68 1400 aa13.7□□□□□ -0.22
TOM1L1-211ENST00000572298 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
TOM1L1-211ENST00000572298 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
TOM1L1-211ENST00000572298 ARHGEF5Q12774 1597 aa13.68□□□□□ -0.22
TOM1L1-211ENST00000572298 YEATS2Q9ULM3 1422 aa13.68□□□□□ -0.22
TOM1L1-211ENST00000572298 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
TOM1L1-211ENST00000572298 PTPN23Q9H3S7 1636 aa13.68□□□□□ -0.22
TOM1L1-211ENST00000572298 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
TOM1L1-211ENST00000572298 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
TOM1L1-211ENST00000572298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
TOM1L1-211ENST00000572298 ATP7AQ04656 1500 aa13.64□□□□□ -0.23
TOM1L1-211ENST00000572298 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
TOM1L1-211ENST00000572298 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
TOM1L1-211ENST00000572298 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
TOM1L1-211ENST00000572298 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
TOM1L1-211ENST00000572298 ABCC5O15440 1437 aa13.61□□□□□ -0.23
TOM1L1-211ENST00000572298 DAPK1P53355 1430 aa13.61□□□□□ -0.23
TOM1L1-211ENST00000572298 A2MP01023 1474 aa13.61□□□□□ -0.23
TOM1L1-211ENST00000572298 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
TOM1L1-211ENST00000572298 DHX29Q7Z478 1369 aaKnown RBP13.6□□□□□ -0.23
TOM1L1-211ENST00000572298 KDM4FA0A1W2PPD8 638 aa13.6□□□□□ -0.23
TOM1L1-211ENST00000572298 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
TOM1L1-211ENST00000572298 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
TOM1L1-211ENST00000572298 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
TOM1L1-211ENST00000572298 AGLP35573 1532 aa13.59□□□□□ -0.23
TOM1L1-211ENST00000572298 ANKRD30AQ9BXX3 1397 aa13.59□□□□□ -0.23
TOM1L1-211ENST00000572298 MLECQ14165 292 aa13.59□□□□□ -0.23
TOM1L1-211ENST00000572298 RRBP1Q9P2E9 1410 aaKnown RBP13.58□□□□□ -0.24
TOM1L1-211ENST00000572298 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
TOM1L1-211ENST00000572298 ADGBQ8N7X0 1667 aa13.58□□□□□ -0.24
TOM1L1-211ENST00000572298 CHIC2Q9UKJ5 165 aa13.57□□□□□ -0.24
TOM1L1-211ENST00000572298 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
TOM1L1-211ENST00000572298 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
TOM1L1-211ENST00000572298 KIF3BO15066 747 aa13.55□□□□□ -0.24
TOM1L1-211ENST00000572298 KIF15Q9NS87 1388 aa13.55□□□□□ -0.24
TOM1L1-211ENST00000572298 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
TOM1L1-211ENST00000572298 GGT6Q6P531 493 aa13.54□□□□□ -0.24
TOM1L1-211ENST00000572298 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
TOM1L1-211ENST00000572298 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
TOM1L1-211ENST00000572298 CROCC2H7BZ55 1655 aa13.53□□□□□ -0.24
TOM1L1-211ENST00000572298 ITGAEP38570 1179 aa13.53□□□□□ -0.24
TOM1L1-211ENST00000572298 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
TOM1L1-211ENST00000572298 ADAMTSL3P82987 1691 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms