RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
LITAF-209ENST00000571688 TCOF1Q13428 1488 aaKnown RBP22.72■■□□□ 1.23
LITAF-209ENST00000571688 SAMD9Q5K651 1589 aa22.71■■□□□ 1.23
LITAF-209ENST00000571688 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.23
LITAF-209ENST00000571688 IL27Q8NEV9 243 aa22.7■■□□□ 1.22
LITAF-209ENST00000571688 RRP7BPQ9NSQ0 103 aa22.7■■□□□ 1.22
LITAF-209ENST00000571688 ABCA10Q8WWZ4 1543 aa22.69■■□□□ 1.22
LITAF-209ENST00000571688 TEX14Q8IWB6 1497 aa22.67■■□□□ 1.22
LITAF-209ENST00000571688 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
LITAF-209ENST00000571688 NBPF8Q3BBV2 869 aa22.66■■□□□ 1.22
LITAF-209ENST00000571688 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
LITAF-209ENST00000571688 DHX29Q7Z478 1369 aaKnown RBP22.65■■□□□ 1.22
LITAF-209ENST00000571688 USP35Q9P2H5 1018 aa22.63■■□□□ 1.21
LITAF-209ENST00000571688 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
LITAF-209ENST00000571688 MAGI3Q5TCQ9 1506 aa22.62■■□□□ 1.21
LITAF-209ENST00000571688 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
LITAF-209ENST00000571688 ANKRD30BQ9BXX2 1392 aa22.61■■□□□ 1.21
LITAF-209ENST00000571688 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
LITAF-209ENST00000571688 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
LITAF-209ENST00000571688 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
LITAF-209ENST00000571688 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
LITAF-209ENST00000571688 FOXD1Q16676 465 aa22.56■■□□□ 1.2
LITAF-209ENST00000571688 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
LITAF-209ENST00000571688 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
LITAF-209ENST00000571688 NEFMP07197 916 aa22.55■■□□□ 1.2
LITAF-209ENST00000571688 RTN4Q9NQC3 1192 aaKnown RBP22.54■■□□□ 1.2
LITAF-209ENST00000571688 BCORL1Q5H9F3 1711 aa22.53■■□□□ 1.2
LITAF-209ENST00000571688 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
LITAF-209ENST00000571688 PNISRQ8TF01 805 aaKnown RBP22.52■■□□□ 1.2
LITAF-209ENST00000571688 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
LITAF-209ENST00000571688 LAS1LQ9Y4W2 734 aaKnown RBP22.51■■□□□ 1.19
LITAF-209ENST00000571688 PDE4AP27815 886 aa22.5■■□□□ 1.19
LITAF-209ENST00000571688 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
LITAF-209ENST00000571688 BACH2Q9BYV9 841 aa22.49■■□□□ 1.19
LITAF-209ENST00000571688 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
LITAF-209ENST00000571688 RRP1P56182 461 aaKnown RBP22.48■■□□□ 1.19
LITAF-209ENST00000571688 MS4A1P11836 297 aa22.47■■□□□ 1.19
LITAF-209ENST00000571688 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
LITAF-209ENST00000571688 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
LITAF-209ENST00000571688 ARID4BQ4LE39 1312 aaPredicted RBP22.45■■□□□ 1.18
LITAF-209ENST00000571688 EXOC6Q8TAG9 804 aa22.44■■□□□ 1.18
LITAF-209ENST00000571688 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
LITAF-209ENST00000571688 KDM5CP41229 1560 aa22.42■■□□□ 1.18
LITAF-209ENST00000571688 USP47Q96K76 1375 aa22.42■■□□□ 1.18
LITAF-209ENST00000571688 TMC1Q8TDI8 760 aa22.41■■□□□ 1.18
LITAF-209ENST00000571688 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
LITAF-209ENST00000571688 KIF14Q15058 1648 aa22.4■■□□□ 1.18
LITAF-209ENST00000571688 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
LITAF-209ENST00000571688 NESP48681 1621 aa22.39■■□□□ 1.17
LITAF-209ENST00000571688 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.17
LITAF-209ENST00000571688 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.39■■□□□ 1.17
LITAF-209ENST00000571688 DAPK1P53355 1430 aa22.38■■□□□ 1.17
LITAF-209ENST00000571688 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
LITAF-209ENST00000571688 EPRSP07814 1512 aaKnown RBP22.37■■□□□ 1.17
LITAF-209ENST00000571688 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
LITAF-209ENST00000571688 RCAN3Q9UKA8 241 aa22.36■■□□□ 1.17
LITAF-209ENST00000571688 SLC4A1APQ9BWU0 796 aaKnown RBP22.36■■□□□ 1.17
LITAF-209ENST00000571688 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
LITAF-209ENST00000571688 DDRGK1Q96HY6 314 aa22.34■■□□□ 1.17
LITAF-209ENST00000571688 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
LITAF-209ENST00000571688 GSE1Q14687 1217 aa22.33■■□□□ 1.16
LITAF-209ENST00000571688 PZPP20742 1482 aa22.33■■□□□ 1.16
LITAF-209ENST00000571688 KTN1Q86UP2 1357 aaKnown RBP22.33■■□□□ 1.16
LITAF-209ENST00000571688 BRPF3Q9ULD4 1205 aa22.32■■□□□ 1.16
LITAF-209ENST00000571688 ABCC5O15440 1437 aa22.32■■□□□ 1.16
LITAF-209ENST00000571688 UBE2Q2Q8WVN8 375 aa22.31■■□□□ 1.16
LITAF-209ENST00000571688 MYBBP1AQ9BQG0 1328 aaKnown RBP22.3■■□□□ 1.16
LITAF-209ENST00000571688 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
LITAF-209ENST00000571688 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
LITAF-209ENST00000571688 E9PCH4 1651 aa22.29■■□□□ 1.16
LITAF-209ENST00000571688 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
LITAF-209ENST00000571688 RALGAPBQ86X10 1494 aa22.26■■□□□ 1.15
LITAF-209ENST00000571688 RALBP1Q15311 655 aa22.26■■□□□ 1.15
LITAF-209ENST00000571688 NFKBIBQ15653 356 aa22.26■■□□□ 1.15
LITAF-209ENST00000571688 WDR62O43379 1518 aa22.26■■□□□ 1.15
LITAF-209ENST00000571688 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
LITAF-209ENST00000571688 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
LITAF-209ENST00000571688 KIAA1107Q9UPP5 1409 aa22.24■■□□□ 1.15
LITAF-209ENST00000571688 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
LITAF-209ENST00000571688 ZNF326Q5BKZ1 582 aaKnown RBP22.2■■□□□ 1.14
LITAF-209ENST00000571688 FRAT1Q92837 279 aaPredicted RBP22.2■■□□□ 1.14
LITAF-209ENST00000571688 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
LITAF-209ENST00000571688 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
LITAF-209ENST00000571688 SKAP1Q86WV1 359 aa22.15■■□□□ 1.14
LITAF-209ENST00000571688 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
LITAF-209ENST00000571688 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
LITAF-209ENST00000571688 PARD3Q8TEW0 1356 aa22.15■■□□□ 1.14
LITAF-209ENST00000571688 IQGAP2Q13576 1575 aa22.14■■□□□ 1.14
LITAF-209ENST00000571688 CRBNQ96SW2 442 aa22.14■■□□□ 1.14
LITAF-209ENST00000571688 ARHGEF12Q9NZN5 1544 aa22.14■■□□□ 1.13
LITAF-209ENST00000571688 CDCA7LQ96GN5 454 aa22.13■■□□□ 1.13
LITAF-209ENST00000571688 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
LITAF-209ENST00000571688 PLIN1O60240 522 aa22.12■■□□□ 1.13
LITAF-209ENST00000571688 ZMYM4Q5VZL5 1548 aa22.12■■□□□ 1.13
LITAF-209ENST00000571688 INSRP06213 1382 aa22.12■■□□□ 1.13
LITAF-209ENST00000571688 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
LITAF-209ENST00000571688 SLC4A3P48751 1232 aa22.11■■□□□ 1.13
LITAF-209ENST00000571688 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
LITAF-209ENST00000571688 PKD2Q13563 968 aa22.09■■□□□ 1.13
LITAF-209ENST00000571688 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms