RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 NEO1Q92859 1461 aa22.97■■□□□ 1.27
KLHDC4-223ENST00000568499 CFAP74Q9C0B2 1584 aa22.95■■□□□ 1.26
KLHDC4-223ENST00000568499 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
KLHDC4-223ENST00000568499 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
KLHDC4-223ENST00000568499 ITSN2Q9NZM3 1697 aa22.93■■□□□ 1.26
KLHDC4-223ENST00000568499 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
KLHDC4-223ENST00000568499 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
KLHDC4-223ENST00000568499 PPRC1Q5VV67 1664 aaKnown RBP22.91■■□□□ 1.26
KLHDC4-223ENST00000568499 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
KLHDC4-223ENST00000568499 MIA2Q96PC5 1412 aa22.89■■□□□ 1.25
KLHDC4-223ENST00000568499 PLEKHH2Q8IVE3 1493 aa22.87■■□□□ 1.25
KLHDC4-223ENST00000568499 CDC42BPBQ9Y5S2 1711 aa22.87■■□□□ 1.25
KLHDC4-223ENST00000568499 ADGRL1O94910 1474 aa22.86■■□□□ 1.25
KLHDC4-223ENST00000568499 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.25
KLHDC4-223ENST00000568499 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
KLHDC4-223ENST00000568499 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
KLHDC4-223ENST00000568499 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
KLHDC4-223ENST00000568499 RSPH4AQ5TD94 716 aa22.81■■□□□ 1.24
KLHDC4-223ENST00000568499 KDM6BO15054 1643 aa22.8■■□□□ 1.24
KLHDC4-223ENST00000568499 ZNF644Q9H582 1327 aaPredicted RBP22.8■■□□□ 1.24
KLHDC4-223ENST00000568499 HNRNPMP52272 730 aaKnown RBP eCLIP22.78■■□□□ 1.244e-6■■■□□ 14.8
KLHDC4-223ENST00000568499 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
KLHDC4-223ENST00000568499 CAMSAP2Q08AD1 1489 aa22.78■■□□□ 1.24
KLHDC4-223ENST00000568499 RAPGEF3O95398 923 aa22.77■■□□□ 1.24
KLHDC4-223ENST00000568499 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
KLHDC4-223ENST00000568499 ABCC1P33527 1531 aa22.77■■□□□ 1.24
KLHDC4-223ENST00000568499 ZNF518AQ6AHZ1 1483 aa22.74■■□□□ 1.23
KLHDC4-223ENST00000568499 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
KLHDC4-223ENST00000568499 PTPN23Q9H3S7 1636 aa22.74■■□□□ 1.23
KLHDC4-223ENST00000568499 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
KLHDC4-223ENST00000568499 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
KLHDC4-223ENST00000568499 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
KLHDC4-223ENST00000568499 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
KLHDC4-223ENST00000568499 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
KLHDC4-223ENST00000568499 AFAP1Q8N556 730 aa22.72■■□□□ 1.23
KLHDC4-223ENST00000568499 TCOF1Q13428 1488 aaKnown RBP22.72■■□□□ 1.23
KLHDC4-223ENST00000568499 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.22
KLHDC4-223ENST00000568499 TRAPPC8Q9Y2L5 1435 aa22.69■■□□□ 1.22
KLHDC4-223ENST00000568499 MBD5Q9P267 1494 aa22.68■■□□□ 1.22
KLHDC4-223ENST00000568499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.221e-7■■■■■ 57
KLHDC4-223ENST00000568499 SPAG9O60271 1321 aaKnown RBP22.68■■□□□ 1.22
KLHDC4-223ENST00000568499 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
KLHDC4-223ENST00000568499 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
KLHDC4-223ENST00000568499 ARHGEF5Q12774 1597 aa22.66■■□□□ 1.22
KLHDC4-223ENST00000568499 MAGI2Q86UL8 1455 aa22.65■■□□□ 1.22
KLHDC4-223ENST00000568499 RICTORQ6R327 1708 aa22.65■■□□□ 1.22
KLHDC4-223ENST00000568499 KDM5CP41229 1560 aa22.62■■□□□ 1.21
KLHDC4-223ENST00000568499 FRMPD1Q5SYB0 1578 aa22.62■■□□□ 1.21
KLHDC4-223ENST00000568499 ZMYM4Q5VZL5 1548 aa22.62■■□□□ 1.21
KLHDC4-223ENST00000568499 MLH3Q9UHC1 1453 aa22.61■■□□□ 1.21
KLHDC4-223ENST00000568499 DAPK1P53355 1430 aa22.6■■□□□ 1.21
KLHDC4-223ENST00000568499 RTEL1-TNFRSF6BF6WH68 1400 aa22.59■■□□□ 1.21
KLHDC4-223ENST00000568499 ABCC5O15440 1437 aa22.59■■□□□ 1.21
KLHDC4-223ENST00000568499 ITGAEP38570 1179 aa22.58■■□□□ 1.21
KLHDC4-223ENST00000568499 HECW2Q9P2P5 1572 aa22.58■■□□□ 1.2
KLHDC4-223ENST00000568499 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
KLHDC4-223ENST00000568499 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
KLHDC4-223ENST00000568499 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
KLHDC4-223ENST00000568499 SHANK2Q9UPX8 1470 aa22.55■■□□□ 1.2
KLHDC4-223ENST00000568499 ATP7AQ04656 1500 aa22.54■■□□□ 1.2
KLHDC4-223ENST00000568499 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
KLHDC4-223ENST00000568499 ANKRD30AQ9BXX3 1397 aa22.52■■□□□ 1.2
KLHDC4-223ENST00000568499 YEATS2Q9ULM3 1422 aa22.52■■□□□ 1.2
KLHDC4-223ENST00000568499 MAST1Q9Y2H9 1570 aa22.51■■□□□ 1.19
KLHDC4-223ENST00000568499 ATP10AO60312 1499 aa22.51■■□□□ 1.19
KLHDC4-223ENST00000568499 ARHGEF40Q8TER5 1519 aa22.5■■□□□ 1.19
KLHDC4-223ENST00000568499 INO80Q9ULG1 1556 aaPredicted RBP22.5■■□□□ 1.19
KLHDC4-223ENST00000568499 KIDINS220Q9ULH0 1771 aa22.48■■□□□ 1.19
KLHDC4-223ENST00000568499 CROCC2H7BZ55 1655 aa22.48■■□□□ 1.19
KLHDC4-223ENST00000568499 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
KLHDC4-223ENST00000568499 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
KLHDC4-223ENST00000568499 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
KLHDC4-223ENST00000568499 ADGRL2O95490 1459 aa22.44■■□□□ 1.18
KLHDC4-223ENST00000568499 A2MP01023 1474 aa22.44■■□□□ 1.18
KLHDC4-223ENST00000568499 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
KLHDC4-223ENST00000568499 KIF15Q9NS87 1388 aa22.44■■□□□ 1.18
KLHDC4-223ENST00000568499 DIP2CQ9Y2E4 1556 aa22.44■■□□□ 1.18
KLHDC4-223ENST00000568499 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
KLHDC4-223ENST00000568499 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
KLHDC4-223ENST00000568499 DHX29Q7Z478 1369 aaKnown RBP22.43■■□□□ 1.18
KLHDC4-223ENST00000568499 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
KLHDC4-223ENST00000568499 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
KLHDC4-223ENST00000568499 ADGBQ8N7X0 1667 aa22.41■■□□□ 1.18
KLHDC4-223ENST00000568499 REREQ9P2R6 1566 aa22.4■■□□□ 1.18
KLHDC4-223ENST00000568499 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.17
KLHDC4-223ENST00000568499 KIF3BO15066 747 aa22.35■■□□□ 1.17
KLHDC4-223ENST00000568499 AGLP35573 1532 aa22.35■■□□□ 1.17
KLHDC4-223ENST00000568499 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
KLHDC4-223ENST00000568499 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
KLHDC4-223ENST00000568499 MLECQ14165 292 aa22.32■■□□□ 1.16
KLHDC4-223ENST00000568499 ESF1Q9H501 851 aaKnown RBP22.31■■□□□ 1.16
KLHDC4-223ENST00000568499 GGT6Q6P531 493 aa22.3■■□□□ 1.16
KLHDC4-223ENST00000568499 HFM1A2PYH4 1435 aa22.3■■□□□ 1.16
KLHDC4-223ENST00000568499 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
KLHDC4-223ENST00000568499 EIF2AK4Q9P2K8 1649 aaKnown RBP22.27■■□□□ 1.16
KLHDC4-223ENST00000568499 ACIN1Q9UKV3 1341 aaKnown RBP22.27■■□□□ 1.16
KLHDC4-223ENST00000568499 NAIPQ13075 1403 aa22.26■■□□□ 1.15
KLHDC4-223ENST00000568499 KANK1Q14678 1352 aa22.24■■□□□ 1.15
KLHDC4-223ENST00000568499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.155e-6■■□□□ 12
KLHDC4-223ENST00000568499 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms