RNA–Protein interactions for RNA: ENST00000568448.1

UTP4-213, Transcript of UTP4, small subunit processome component, humanhuman

TSL 4

Gene UTP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-213ENST00000568448 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
UTP4-213ENST00000568448 CTTNBP2Q8WZ74 1663 aa25.39■■□□□ 1.65
UTP4-213ENST00000568448 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
UTP4-213ENST00000568448 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
UTP4-213ENST00000568448 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
UTP4-213ENST00000568448 HSPA1LP34931 641 aa25.33■■□□□ 1.65
UTP4-213ENST00000568448 HECW1Q76N89 1606 aa25.32■■□□□ 1.64
UTP4-213ENST00000568448 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
UTP4-213ENST00000568448 MAGI2Q86UL8 1455 aa25.3■■□□□ 1.64
UTP4-213ENST00000568448 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
UTP4-213ENST00000568448 PIP4K2BP78356 416 aa25.27■■□□□ 1.64
UTP4-213ENST00000568448 SETD1BQ9UPS6 1966 aaKnown RBP25.25■■□□□ 1.63
UTP4-213ENST00000568448 NCOA1Q15788 1441 aa25.25■■□□□ 1.63
UTP4-213ENST00000568448 ATP10AO60312 1499 aa25.25■■□□□ 1.63
UTP4-213ENST00000568448 C9orf84Q5VXU9 1444 aa25.24■■□□□ 1.63
UTP4-213ENST00000568448 NCKAP5LQ9HCH0 1330 aa25.19■■□□□ 1.62
UTP4-213ENST00000568448 RAPGEF6Q8TEU7 1601 aa25.18■■□□□ 1.62
UTP4-213ENST00000568448 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
UTP4-213ENST00000568448 C3P01024 1663 aa25.16■■□□□ 1.62
UTP4-213ENST00000568448 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
UTP4-213ENST00000568448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.14■■□□□ 1.62
UTP4-213ENST00000568448 CAMSAP1Q5T5Y3 1602 aa25.14■■□□□ 1.61
UTP4-213ENST00000568448 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
UTP4-213ENST00000568448 ESF1Q9H501 851 aaKnown RBP25.12■■□□□ 1.61
UTP4-213ENST00000568448 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
UTP4-213ENST00000568448 MYT1LQ9UL68 1186 aa25.1■■□□□ 1.61
UTP4-213ENST00000568448 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
UTP4-213ENST00000568448 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
UTP4-213ENST00000568448 TOM1O60784 492 aa25.05■■□□□ 1.6
UTP4-213ENST00000568448 PPP6R1Q9UPN7 881 aa24.95■■□□□ 1.58
UTP4-213ENST00000568448 PLCH2O75038 1416 aa24.95■■□□□ 1.58
UTP4-213ENST00000568448 RANGAP1P46060 587 aaPredicted RBP24.94■■□□□ 1.58
UTP4-213ENST00000568448 PKD2Q13563 968 aa24.94■■□□□ 1.58
UTP4-213ENST00000568448 AFAP1Q8N556 730 aa24.94■■□□□ 1.58
UTP4-213ENST00000568448 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
UTP4-213ENST00000568448 SAMD9Q5K651 1589 aa24.92■■□□□ 1.58
UTP4-213ENST00000568448 DIP2CQ9Y2E4 1556 aa24.91■■□□□ 1.58
UTP4-213ENST00000568448 EFCAB2Q5VUJ9 269 aa24.9■■□□□ 1.58
UTP4-213ENST00000568448 ZNF518AQ6AHZ1 1483 aa24.89■■□□□ 1.57
UTP4-213ENST00000568448 PRXQ9BXM0 1461 aa24.87■■□□□ 1.57
UTP4-213ENST00000568448 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
UTP4-213ENST00000568448 PLA2R1Q13018 1463 aa24.84■■□□□ 1.57
UTP4-213ENST00000568448 CNTLNQ9NXG0 1405 aa24.84■■□□□ 1.57
UTP4-213ENST00000568448 TCOF1Q13428 1488 aaKnown RBP24.83■■□□□ 1.57
UTP4-213ENST00000568448 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
UTP4-213ENST00000568448 AGLP35573 1532 aa24.83■■□□□ 1.57
UTP4-213ENST00000568448 NPATQ14207 1427 aa24.83■■□□□ 1.57
UTP4-213ENST00000568448 REREQ9P2R6 1566 aa24.82■■□□□ 1.56
UTP4-213ENST00000568448 KDM5CP41229 1560 aa24.81■■□□□ 1.56
UTP4-213ENST00000568448 CPS1P31327 1500 aa24.79■■□□□ 1.56
UTP4-213ENST00000568448 ZMYM3Q14202 1370 aa24.79■■□□□ 1.56
UTP4-213ENST00000568448 CDK13Q14004 1512 aaKnown RBP24.78■■□□□ 1.56
UTP4-213ENST00000568448 PTPRKQ15262 1439 aa24.78■■□□□ 1.56
UTP4-213ENST00000568448 POTEAQ6S8J7 498 aa24.77■■□□□ 1.56
UTP4-213ENST00000568448 MYO5CQ9NQX4 1742 aa24.77■■□□□ 1.56
UTP4-213ENST00000568448 MYO3AQ8NEV4 1616 aa24.76■■□□□ 1.55
UTP4-213ENST00000568448 CEP170BQ9Y4F5 1589 aaPredicted RBP24.76■■□□□ 1.55
UTP4-213ENST00000568448 ALKQ9UM73 1620 aa24.75■■□□□ 1.55
UTP4-213ENST00000568448 SHANK2Q9UPX8 1470 aa24.75■■□□□ 1.55
UTP4-213ENST00000568448 ZNF142P52746 1687 aaPredicted RBP24.75■■□□□ 1.55
UTP4-213ENST00000568448 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
UTP4-213ENST00000568448 MROH2AA6NES4 1674 aa24.71■■□□□ 1.55
UTP4-213ENST00000568448 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
UTP4-213ENST00000568448 SETD1AO15047 1707 aaKnown RBP24.68■■□□□ 1.54
UTP4-213ENST00000568448 ATP1B4Q9UN42 357 aaPredicted RBP24.65■■□□□ 1.54
UTP4-213ENST00000568448 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
UTP4-213ENST00000568448 KIF14Q15058 1648 aa24.61■■□□□ 1.53
UTP4-213ENST00000568448 NEURL4Q96JN8 1562 aa24.59■■□□□ 1.53
UTP4-213ENST00000568448 VWDEQ8N2E2 1590 aa24.57■■□□□ 1.52
UTP4-213ENST00000568448 POLR1AO95602 1720 aaPredicted RBP24.57■■□□□ 1.52
UTP4-213ENST00000568448 DNMT1P26358 1616 aaKnown RBP24.57■■□□□ 1.52
UTP4-213ENST00000568448 KIDINS220Q9ULH0 1771 aa24.56■■□□□ 1.52
UTP4-213ENST00000568448 A2ML1A8K2U0 1454 aa24.56■■□□□ 1.52
UTP4-213ENST00000568448 GGT6Q6P531 493 aa24.52■■□□□ 1.52
UTP4-213ENST00000568448 UPF1Q92900 1129 aaKnown RBP eCLIP24.5■■□□□ 1.51
UTP4-213ENST00000568448 CDK11AQ9UQ88 783 aaPredicted RBP24.49■■□□□ 1.51
UTP4-213ENST00000568448 ABCC1P33527 1531 aa24.48■■□□□ 1.51
UTP4-213ENST00000568448 ANKLE2Q86XL3 938 aa24.48■■□□□ 1.51
UTP4-213ENST00000568448 ITSN2Q9NZM3 1697 aa24.48■■□□□ 1.51
UTP4-213ENST00000568448 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
UTP4-213ENST00000568448 RNF17Q9BXT8 1623 aaKnown RBP24.47■■□□□ 1.51
UTP4-213ENST00000568448 LRRC7Q96NW7 1537 aa24.47■■□□□ 1.51
UTP4-213ENST00000568448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
UTP4-213ENST00000568448 NPHP4O75161 1426 aaPredicted RBP24.43■■□□□ 1.5
UTP4-213ENST00000568448 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
UTP4-213ENST00000568448 STRCP1A6NGW2 1772 aa24.41■■□□□ 1.5
UTP4-213ENST00000568448 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
UTP4-213ENST00000568448 CLIP1P30622 1438 aa24.4■■□□□ 1.5
UTP4-213ENST00000568448 SAMD9LQ8IVG5 1584 aa24.38■■□□□ 1.49
UTP4-213ENST00000568448 FBXO31Q5XUX0 539 aaPredicted RBP24.38■■□□□ 1.49
UTP4-213ENST00000568448 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
UTP4-213ENST00000568448 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
UTP4-213ENST00000568448 ZNF777Q9ULD5 760 aaPredicted RBP24.36■■□□□ 1.49
UTP4-213ENST00000568448 TNRQ92752 1358 aa24.36■■□□□ 1.49
UTP4-213ENST00000568448 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
UTP4-213ENST00000568448 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
UTP4-213ENST00000568448 SYNMO15061 1565 aa24.33■■□□□ 1.49
UTP4-213ENST00000568448 A2MP01023 1474 aa24.32■■□□□ 1.48
UTP4-213ENST00000568448 MED14O60244 1454 aa24.32■■□□□ 1.48
UTP4-213ENST00000568448 IQGAP1P46940 1657 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms