RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 FOXD4L1Q9NU39 408 aa7.63□□□□□ -1.19
HERPUD1-213ENST00000568358 KIF21BO75037 1637 aa7.63□□□□□ -1.19
HERPUD1-213ENST00000568358 ADGRL1O94910 1474 aa7.62□□□□□ -1.19
HERPUD1-213ENST00000568358 FHOD3Q2V2M9 1422 aa7.61□□□□□ -1.19
HERPUD1-213ENST00000568358 CDK11AQ9UQ88 783 aaPredicted RBP7.61□□□□□ -1.19
HERPUD1-213ENST00000568358 EFCAB5A4FU69 1503 aa7.61□□□□□ -1.19
HERPUD1-213ENST00000568358 ABCA9Q8IUA7 1624 aa7.6□□□□□ -1.19
HERPUD1-213ENST00000568358 ARAP3Q8WWN8 1544 aa7.6□□□□□ -1.19
HERPUD1-213ENST00000568358 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
HERPUD1-213ENST00000568358 NUP153P49790 1475 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-213ENST00000568358 NEO1Q92859 1461 aa7.58□□□□□ -1.2
HERPUD1-213ENST00000568358 RAPGEF3O95398 923 aa7.58□□□□□ -1.2
HERPUD1-213ENST00000568358 FMN1Q68DA7 1419 aa7.58□□□□□ -1.2
HERPUD1-213ENST00000568358 MYCNP04198 464 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-213ENST00000568358 CFAP74Q9C0B2 1584 aa7.55□□□□□ -1.2
HERPUD1-213ENST00000568358 PLCB2Q00722 1185 aa7.55□□□□□ -1.2
HERPUD1-213ENST00000568358 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
HERPUD1-213ENST00000568358 AKNAQ7Z591 1439 aa7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 ABCB7O75027 752 aa7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 EFCAB2Q5VUJ9 269 aa7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 MYT1LQ9UL68 1186 aa7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 FANCAO15360 1455 aa7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 DENND4BO75064 1496 aaPredicted RBP7.54□□□□□ -1.2
HERPUD1-213ENST00000568358 HECW1Q76N89 1606 aa7.53□□□□□ -1.2
HERPUD1-213ENST00000568358 PRKCSHP14314 528 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-213ENST00000568358 CLIP1P30622 1438 aa7.52□□□□□ -1.2
HERPUD1-213ENST00000568358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.52□□□□□ -1.2
HERPUD1-213ENST00000568358 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
HERPUD1-213ENST00000568358 TAOK2Q9UL54 1235 aa7.52□□□□□ -1.21
HERPUD1-213ENST00000568358 CDK13Q14004 1512 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-213ENST00000568358 POGZQ7Z3K3 1410 aa7.52□□□□□ -1.21
HERPUD1-213ENST00000568358 BCANQ96GW7 911 aa7.51□□□□□ -1.21
HERPUD1-213ENST00000568358 MYO5CQ9NQX4 1742 aa7.51□□□□□ -1.21
HERPUD1-213ENST00000568358 PLCH2O75038 1416 aa7.51□□□□□ -1.21
HERPUD1-213ENST00000568358 RICTORQ6R327 1708 aa7.5□□□□□ -1.21
HERPUD1-213ENST00000568358 SCAPERQ9BY12 1400 aa7.5□□□□□ -1.21
HERPUD1-213ENST00000568358 TTC37Q6PGP7 1564 aa7.5□□□□□ -1.21
HERPUD1-213ENST00000568358 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
HERPUD1-213ENST00000568358 KIF14Q15058 1648 aa7.49□□□□□ -1.21
HERPUD1-213ENST00000568358 FKBP8Q14318 412 aa7.49□□□□□ -1.21
HERPUD1-213ENST00000568358 BCORL1Q5H9F3 1711 aa7.49□□□□□ -1.21
HERPUD1-213ENST00000568358 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
HERPUD1-213ENST00000568358 ADAMTSL3P82987 1691 aa7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 TROQ12816 1431 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 MLECQ14165 292 aa7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 FRMPD1Q5SYB0 1578 aa7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 PTPRMP28827 1452 aa7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 CCDC18Q5T9S5 1454 aa7.48□□□□□ -1.21
HERPUD1-213ENST00000568358 ARHGAP5Q13017 1502 aa7.47□□□□□ -1.21
HERPUD1-213ENST00000568358 ZFYVE16Q7Z3T8 1539 aa7.47□□□□□ -1.21
HERPUD1-213ENST00000568358 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
HERPUD1-213ENST00000568358 CASKIN1Q8WXD9 1431 aa7.46□□□□□ -1.21
HERPUD1-213ENST00000568358 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-213ENST00000568358 ZMYM4Q5VZL5 1548 aa7.46□□□□□ -1.22
HERPUD1-213ENST00000568358 RIMS1Q86UR5 1692 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 ATP10AO60312 1499 aa7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 LRRIQ1Q96JM4 1722 aa7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 AFAP1Q8N556 730 aa7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 ZNF777Q9ULD5 760 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 MADDQ8WXG6 1647 aa7.45□□□□□ -1.22
HERPUD1-213ENST00000568358 ZNF518AQ6AHZ1 1483 aa7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 ILDR1Q86SU0 546 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 SETD1BQ9UPS6 1966 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 C9orf84Q5VXU9 1444 aa7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
HERPUD1-213ENST00000568358 FER1L4A9Z1Z3 1794 aa7.43□□□□□ -1.22
HERPUD1-213ENST00000568358 FYCO1Q9BQS8 1478 aa7.43□□□□□ -1.22
HERPUD1-213ENST00000568358 RBM42Q9BTD8 480 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-213ENST00000568358 PCF11O94913 1555 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-213ENST00000568358 CFDP1Q9UEE9 299 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-213ENST00000568358 POLA2Q14181 598 aa7.41□□□□□ -1.22
HERPUD1-213ENST00000568358 POTEHQ6S545 545 aa7.41□□□□□ -1.22
HERPUD1-213ENST00000568358 MTUS2Q5JR59 1369 aa7.41□□□□□ -1.22
HERPUD1-213ENST00000568358 PREX2Q70Z35 1606 aa7.41□□□□□ -1.22
HERPUD1-213ENST00000568358 CDC42BPAQ5VT25 1732 aa7.41□□□□□ -1.22
HERPUD1-213ENST00000568358 ARXQ96QS3 562 aa7.4□□□□□ -1.22
HERPUD1-213ENST00000568358 CCNB3Q8WWL7 1395 aa7.4□□□□□ -1.22
HERPUD1-213ENST00000568358 MLH3Q9UHC1 1453 aa7.39□□□□□ -1.23
HERPUD1-213ENST00000568358 SPAG9O60271 1321 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-213ENST00000568358 HNRNPMP52272 730 aaKnown RBP eCLIP7.39□□□□□ -1.23
HERPUD1-213ENST00000568358 ITSN2Q9NZM3 1697 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 KDM5CP41229 1560 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 PLEKHH2Q8IVE3 1493 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 CEBPAP49715 358 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 HSPA2P54652 639 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 FBXO41Q8TF61 875 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 SIGLEC1Q9BZZ2 1709 aa7.38□□□□□ -1.23
HERPUD1-213ENST00000568358 ABCC1P33527 1531 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 LMTK3Q96Q04 1460 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 TRAPPC8Q9Y2L5 1435 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 ATXN8OSP0DMR3 200 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 VSIG10Q8N0Z9 540 aa7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 GPATCH8Q9UKJ3 1502 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-213ENST00000568358 PREX1Q8TCU6 1659 aa7.36□□□□□ -1.23
HERPUD1-213ENST00000568358 ZBTB12Q9Y330 459 aaPredicted RBP7.36□□□□□ -1.23
HERPUD1-213ENST00000568358 DIP2CQ9Y2E4 1556 aa7.36□□□□□ -1.23
HERPUD1-213ENST00000568358 KIDINS220Q9ULH0 1771 aa7.36□□□□□ -1.23
HERPUD1-213ENST00000568358 CEP162Q5TB80 1403 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms