RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	PKD2	Q13563	968 aa		13.54	□□□□□ -0.24
LYRM1-208	ENST00000567954	ZFYVE16	Q7Z3T8	1539 aa		13.54	□□□□□ -0.24
LYRM1-208	ENST00000567954	ABCA9	Q8IUA7	1624 aa		13.53	□□□□□ -0.24
LYRM1-208	ENST00000567954	EFCAB5	A4FU69	1503 aa		13.53	□□□□□ -0.24
LYRM1-208	ENST00000567954	ZMYM4	Q5VZL5	1548 aa		13.5	□□□□□ -0.25
LYRM1-208	ENST00000567954	PTPRK	Q15262	1439 aa		13.5	□□□□□ -0.25
LYRM1-208	ENST00000567954	KIF27	Q86VH2	1401 aa		13.5	□□□□□ -0.25
LYRM1-208	ENST00000567954	KIAA0556	O60303	1618 aa		13.5	□□□□□ -0.25
LYRM1-208	ENST00000567954	ABCA8	O94911	1581 aa		13.49	□□□□□ -0.25
LYRM1-208	ENST00000567954	SENP3	Q9H4L4	574 aa	Predicted RBP	13.49	□□□□□ -0.25
LYRM1-208	ENST00000567954	PPP6R1	Q9UPN7	881 aa		13.49	□□□□□ -0.25
LYRM1-208	ENST00000567954	CAMSAP1	Q5T5Y3	1602 aa		13.48	□□□□□ -0.25
LYRM1-208	ENST00000567954	ATP10A	O60312	1499 aa		13.48	□□□□□ -0.25
LYRM1-208	ENST00000567954	ARID3C	A6NKF2	412 aa		13.47	□□□□□ -0.25
LYRM1-208	ENST00000567954	C9orf84	Q5VXU9	1444 aa		13.46	□□□□□ -0.26
LYRM1-208	ENST00000567954	RICTOR	Q6R327	1708 aa		13.45	□□□□□ -0.26
LYRM1-208	ENST00000567954	ATP10B	O94823	1461 aa		13.45	□□□□□ -0.26
LYRM1-208	ENST00000567954	CPS1	P31327	1500 aa		13.43	□□□□□ -0.26
LYRM1-208	ENST00000567954	IFFO2	Q5TF58	517 aa		13.42	□□□□□ -0.26
LYRM1-208	ENST00000567954	ESF1	Q9H501	851 aa	Known RBP	13.42	□□□□□ -0.26
LYRM1-208	ENST00000567954	PLA2R1	Q13018	1463 aa		13.42	□□□□□ -0.26
LYRM1-208	ENST00000567954	TCOF1	Q13428	1488 aa	Known RBP	13.41	□□□□□ -0.26
LYRM1-208	ENST00000567954	ALK	Q9UM73	1620 aa		13.39	□□□□□ -0.27
LYRM1-208	ENST00000567954	HECW1	Q76N89	1606 aa		13.39	□□□□□ -0.27
LYRM1-208	ENST00000567954	RAPGEF2	Q9Y4G8	1499 aa		13.38	□□□□□ -0.27
LYRM1-208	ENST00000567954	SHANK2	Q9UPX8	1470 aa		13.37	□□□□□ -0.27
LYRM1-208	ENST00000567954	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.37	□□□□□ -0.27
LYRM1-208	ENST00000567954	NPAT	Q14207	1427 aa		13.36	□□□□□ -0.27
LYRM1-208	ENST00000567954	SETD1A	O15047	1707 aa	Known RBP	13.36	□□□□□ -0.27
LYRM1-208	ENST00000567954	GOLGA3	Q08378	1498 aa		13.35	□□□□□ -0.27
LYRM1-208	ENST00000567954	SCAPER	Q9BY12	1400 aa		13.33	□□□□□ -0.28
LYRM1-208	ENST00000567954	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.33	□□□□□ -0.28
LYRM1-208	ENST00000567954	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.33	□□□□□ -0.28
LYRM1-208	ENST00000567954	C3	P01024	1663 aa		13.32	□□□□□ -0.28
LYRM1-208	ENST00000567954	CNTLN	Q9NXG0	1405 aa		13.31	□□□□□ -0.28
LYRM1-208	ENST00000567954	TRIM52	Q96A61	297 aa		13.29	□□□□□ -0.28
LYRM1-208	ENST00000567954	CFAP74	Q9C0B2	1584 aa		13.28	□□□□□ -0.28
LYRM1-208	ENST00000567954	FOXD1	Q16676	465 aa		13.27	□□□□□ -0.29
LYRM1-208	ENST00000567954	PLEKHD1	A6NEE1	506 aa		13.26	□□□□□ -0.29
LYRM1-208	ENST00000567954	ZMYM3	Q14202	1370 aa		13.26	□□□□□ -0.29
LYRM1-208	ENST00000567954	ZRANB1	Q9UGI0	708 aa		13.26	□□□□□ -0.29
LYRM1-208	ENST00000567954	AGL	P35573	1532 aa		13.25	□□□□□ -0.29
LYRM1-208	ENST00000567954	RBM33	Q96EV2	1170 aa	Known RBP	13.24	□□□□□ -0.29
LYRM1-208	ENST00000567954	ZNF772	Q68DY9	489 aa	Predicted RBP	13.22	□□□□□ -0.29
LYRM1-208	ENST00000567954	MYT1L	Q9UL68	1186 aa		13.21	□□□□□ -0.29
LYRM1-208	ENST00000567954	AFAP1	Q8N556	730 aa		13.2	□□□□□ -0.3
LYRM1-208	ENST00000567954	FAM135B	Q49AJ0	1406 aa		13.2	□□□□□ -0.3
LYRM1-208	ENST00000567954	RXRB	P28702	533 aa		13.19	□□□□□ -0.3
LYRM1-208	ENST00000567954	RERE	Q9P2R6	1566 aa		13.19	□□□□□ -0.3
LYRM1-208	ENST00000567954	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
LYRM1-208	ENST00000567954	LRRC7	Q96NW7	1537 aa		13.18	□□□□□ -0.3
LYRM1-208	ENST00000567954	VWDE	Q8N2E2	1590 aa		13.18	□□□□□ -0.3
LYRM1-208	ENST00000567954	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.18	□□□□□ -0.3
LYRM1-208	ENST00000567954	PLCH2	O75038	1416 aa		13.17	□□□□□ -0.3
LYRM1-208	ENST00000567954	EFCAB2	Q5VUJ9	269 aa		13.17	□□□□□ -0.3
LYRM1-208	ENST00000567954	ZNF518A	Q6AHZ1	1483 aa		13.16	□□□□□ -0.3
LYRM1-208	ENST00000567954	ANKLE2	Q86XL3	938 aa		13.16	□□□□□ -0.3
LYRM1-208	ENST00000567954	P3H3	Q8IVL6	736 aa		13.16	□□□□□ -0.3
LYRM1-208	ENST00000567954	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.14	□□□□□ -0.31
LYRM1-208	ENST00000567954	ZNF142	P52746	1687 aa	Predicted RBP	13.14	□□□□□ -0.31
LYRM1-208	ENST00000567954	SETBP1	Q9Y6X0	1596 aa		13.13	□□□□□ -0.31
LYRM1-208	ENST00000567954	RNF17	Q9BXT8	1623 aa	Known RBP	13.13	□□□□□ -0.31
LYRM1-208	ENST00000567954	NEURL4	Q96JN8	1562 aa		13.11	□□□□□ -0.31
LYRM1-208	ENST00000567954	DIP2C	Q9Y2E4	1556 aa		13.11	□□□□□ -0.31
LYRM1-208	ENST00000567954	A2ML1	A8K2U0	1454 aa		13.11	□□□□□ -0.31
LYRM1-208	ENST00000567954	MYO3A	Q8NEV4	1616 aa		13.11	□□□□□ -0.31
LYRM1-208	ENST00000567954	JCAD	Q9P266	1359 aa		13.1	□□□□□ -0.31
LYRM1-208	ENST00000567954	NUP153	P49790	1475 aa	Known RBP	13.1	□□□□□ -0.31
LYRM1-208	ENST00000567954	MLH3	Q9UHC1	1453 aa		13.1	□□□□□ -0.31
LYRM1-208	ENST00000567954	KDM5C	P41229	1560 aa		13.09	□□□□□ -0.31
LYRM1-208	ENST00000567954	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.08	□□□□□ -0.31
LYRM1-208	ENST00000567954	NPHP4	O75161	1426 aa	Predicted RBP	13.08	□□□□□ -0.32
LYRM1-208	ENST00000567954	MEX3C	Q5U5Q3	659 aa	Known RBP	13.07	□□□□□ -0.32
LYRM1-208	ENST00000567954	MED14	O60244	1454 aa		13.07	□□□□□ -0.32
LYRM1-208	ENST00000567954	DNMT1	P26358	1616 aa	Known RBP	13.06	□□□□□ -0.32
LYRM1-208	ENST00000567954	MROH2A	A6NES4	1674 aa		13.05	□□□□□ -0.32
LYRM1-208	ENST00000567954	RAPGEF6	Q8TEU7	1601 aa		13.04	□□□□□ -0.32
LYRM1-208	ENST00000567954	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.04	□□□□□ -0.32
LYRM1-208	ENST00000567954	SPATA31A6	Q5VVP1	1343 aa		13.04	□□□□□ -0.32
LYRM1-208	ENST00000567954	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.03	□□□□□ -0.32
LYRM1-208	ENST00000567954	NUTM2E	B1AL46	878 aa	Predicted RBP	13.03	□□□□□ -0.32
LYRM1-208	ENST00000567954	YY1	P25490	414 aa		13.03	□□□□□ -0.32
LYRM1-208	ENST00000567954	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.03	□□□□□ -0.32
LYRM1-208	ENST00000567954	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.03	□□□□□ -0.32
LYRM1-208	ENST00000567954	SYNM	O15061	1565 aa		13.02	□□□□□ -0.33
LYRM1-208	ENST00000567954	CDK13	Q14004	1512 aa	Known RBP	13.01	□□□□□ -0.33
LYRM1-208	ENST00000567954	ABCA6	Q8N139	1617 aa		13.01	□□□□□ -0.33
LYRM1-208	ENST00000567954	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.01	□□□□□ -0.33
LYRM1-208	ENST00000567954	LRP6	O75581	1613 aa		12.99	□□□□□ -0.33
LYRM1-208	ENST00000567954	ATAD2	Q6PL18	1390 aa		12.99	□□□□□ -0.33
LYRM1-208	ENST00000567954	RGS12	O14924	1447 aa		12.98	□□□□□ -0.33
LYRM1-208	ENST00000567954	POLR1A	O95602	1720 aa	Predicted RBP	12.97	□□□□□ -0.33
LYRM1-208	ENST00000567954	RBM6	P78332	1123 aa	Known RBP	12.96	□□□□□ -0.33
LYRM1-208	ENST00000567954	CCDC125	Q86Z20	511 aa		12.96	□□□□□ -0.33
LYRM1-208	ENST00000567954	TNR	Q92752	1358 aa		12.95	□□□□□ -0.34
LYRM1-208	ENST00000567954	ABCC1	P33527	1531 aa		12.95	□□□□□ -0.34
LYRM1-208	ENST00000567954	GGT6	Q6P531	493 aa		12.95	□□□□□ -0.34
LYRM1-208	ENST00000567954	CTTNBP2	Q8WZ74	1663 aa		12.95	□□□□□ -0.34
LYRM1-208	ENST00000567954	STRCP1	A6NGW2	1772 aa		12.94	□□□□□ -0.34
LYRM1-208	ENST00000567954	KDM5D	Q9BY66	1539 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms