RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 ADGRL1O94910 1474 aa24.67■■□□□ 1.54
COMMD4-217ENST00000567195 PREX2Q70Z35 1606 aa24.65■■□□□ 1.54
COMMD4-217ENST00000567195 SCAPERQ9BY12 1400 aa24.65■■□□□ 1.54
COMMD4-217ENST00000567195 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
COMMD4-217ENST00000567195 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
COMMD4-217ENST00000567195 CDC42BPBQ9Y5S2 1711 aa24.64■■□□□ 1.54
COMMD4-217ENST00000567195 CDC42BPAQ5VT25 1732 aa24.63■■□□□ 1.53
COMMD4-217ENST00000567195 GPATCH8Q9UKJ3 1502 aaKnown RBP24.61■■□□□ 1.53
COMMD4-217ENST00000567195 LRRC9Q6ZRR7 1453 aa24.6■■□□□ 1.53
COMMD4-217ENST00000567195 FRMPD1Q5SYB0 1578 aa24.59■■□□□ 1.53
COMMD4-217ENST00000567195 RICTORQ6R327 1708 aa24.59■■□□□ 1.53
COMMD4-217ENST00000567195 SUPT6HQ7KZ85 1726 aaKnown RBP24.59■■□□□ 1.53
COMMD4-217ENST00000567195 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
COMMD4-217ENST00000567195 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
COMMD4-217ENST00000567195 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
COMMD4-217ENST00000567195 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
COMMD4-217ENST00000567195 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
COMMD4-217ENST00000567195 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
COMMD4-217ENST00000567195 ZNF518AQ6AHZ1 1483 aa24.52■■□□□ 1.52
COMMD4-217ENST00000567195 ABCC1P33527 1531 aa24.51■■□□□ 1.51
COMMD4-217ENST00000567195 ZMYM4Q5VZL5 1548 aa24.51■■□□□ 1.51
COMMD4-217ENST00000567195 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
COMMD4-217ENST00000567195 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
COMMD4-217ENST00000567195 KDM4FA0A1W2PPD8 638 aa24.49■■□□□ 1.51
COMMD4-217ENST00000567195 PLEKHH2Q8IVE3 1493 aa24.49■■□□□ 1.51
COMMD4-217ENST00000567195 SAMD9LQ8IVG5 1584 aa24.49■■□□□ 1.51
COMMD4-217ENST00000567195 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
COMMD4-217ENST00000567195 ARHGEF12Q9NZN5 1544 aa24.47■■□□□ 1.51
COMMD4-217ENST00000567195 ZFYVE16Q7Z3T8 1539 aa24.46■■□□□ 1.51
COMMD4-217ENST00000567195 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.51
COMMD4-217ENST00000567195 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
COMMD4-217ENST00000567195 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
COMMD4-217ENST00000567195 TRAPPC8Q9Y2L5 1435 aa24.45■■□□□ 1.51
COMMD4-217ENST00000567195 KDM5CP41229 1560 aa24.43■■□□□ 1.5
COMMD4-217ENST00000567195 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
COMMD4-217ENST00000567195 YEATS2Q9ULM3 1422 aa24.43■■□□□ 1.5
COMMD4-217ENST00000567195 ARID4BQ4LE39 1312 aaPredicted RBP24.41■■□□□ 1.5
COMMD4-217ENST00000567195 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
COMMD4-217ENST00000567195 HECW2Q9P2P5 1572 aa24.39■■□□□ 1.5
COMMD4-217ENST00000567195 MLH3Q9UHC1 1453 aa24.38■■□□□ 1.49
COMMD4-217ENST00000567195 ATP10AO60312 1499 aa24.37■■□□□ 1.49
COMMD4-217ENST00000567195 SPAG9O60271 1321 aaKnown RBP24.36■■□□□ 1.49
COMMD4-217ENST00000567195 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
COMMD4-217ENST00000567195 CAMSAP2Q08AD1 1489 aa24.35■■□□□ 1.49
COMMD4-217ENST00000567195 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
COMMD4-217ENST00000567195 RSPH4AQ5TD94 716 aa24.34■■□□□ 1.49
COMMD4-217ENST00000567195 C9orf84Q5VXU9 1444 aa24.34■■□□□ 1.49
COMMD4-217ENST00000567195 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
COMMD4-217ENST00000567195 DIP2CQ9Y2E4 1556 aa24.29■■□□□ 1.48
COMMD4-217ENST00000567195 KIDINS220Q9ULH0 1771 aa24.29■■□□□ 1.48
COMMD4-217ENST00000567195 BCORL1Q5H9F3 1711 aa24.28■■□□□ 1.48
COMMD4-217ENST00000567195 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
COMMD4-217ENST00000567195 CCDC141Q6ZP82 1450 aa24.27■■□□□ 1.48
COMMD4-217ENST00000567195 ATP7AQ04656 1500 aa24.26■■□□□ 1.47
COMMD4-217ENST00000567195 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
COMMD4-217ENST00000567195 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
COMMD4-217ENST00000567195 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
COMMD4-217ENST00000567195 ARHGEF5Q12774 1597 aa24.24■■□□□ 1.47
COMMD4-217ENST00000567195 REREQ9P2R6 1566 aa24.24■■□□□ 1.47
COMMD4-217ENST00000567195 INO80Q9ULG1 1556 aaPredicted RBP24.24■■□□□ 1.47
COMMD4-217ENST00000567195 MLECQ14165 292 aa24.23■■□□□ 1.47
COMMD4-217ENST00000567195 RTEL1-TNFRSF6BF6WH68 1400 aa24.23■■□□□ 1.47
COMMD4-217ENST00000567195 FGD6Q6ZV73 1430 aa24.23■■□□□ 1.47
COMMD4-217ENST00000567195 SIGLEC1Q9BZZ2 1709 aa24.23■■□□□ 1.47
COMMD4-217ENST00000567195 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
COMMD4-217ENST00000567195 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
COMMD4-217ENST00000567195 AGLP35573 1532 aa24.17■■□□□ 1.46
COMMD4-217ENST00000567195 A2MP01023 1474 aa24.16■■□□□ 1.46
COMMD4-217ENST00000567195 MADDQ8WXG6 1647 aa24.16■■□□□ 1.46
COMMD4-217ENST00000567195 TCOF1Q13428 1488 aaKnown RBP24.15■■□□□ 1.46
COMMD4-217ENST00000567195 PTPRMP28827 1452 aa24.14■■□□□ 1.46
COMMD4-217ENST00000567195 ADGBQ8N7X0 1667 aa24.14■■□□□ 1.45
COMMD4-217ENST00000567195 FER1L4A9Z1Z3 1794 aa24.12■■□□□ 1.45
COMMD4-217ENST00000567195 FAM50AQ14320 339 aaKnown RBP24.12■■□□□ 1.45
COMMD4-217ENST00000567195 ESF1Q9H501 851 aaKnown RBP24.12■■□□□ 1.45
COMMD4-217ENST00000567195 RIMS1Q86UR5 1692 aaKnown RBP24.11■■□□□ 1.45
COMMD4-217ENST00000567195 MAST1Q9Y2H9 1570 aa24.11■■□□□ 1.45
COMMD4-217ENST00000567195 DHX29Q7Z478 1369 aaKnown RBP24.1■■□□□ 1.45
COMMD4-217ENST00000567195 ABCC5O15440 1437 aa24.09■■□□□ 1.45
COMMD4-217ENST00000567195 PLXNC1O60486 1568 aa24.08■■□□□ 1.45
COMMD4-217ENST00000567195 DAPK1P53355 1430 aa24.08■■□□□ 1.44
COMMD4-217ENST00000567195 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
COMMD4-217ENST00000567195 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
COMMD4-217ENST00000567195 CROCC2H7BZ55 1655 aa24.03■■□□□ 1.44
COMMD4-217ENST00000567195 GGT6Q6P531 493 aa24.03■■□□□ 1.44
COMMD4-217ENST00000567195 PLPPR3Q6T4P5 718 aa24.03■■□□□ 1.44
COMMD4-217ENST00000567195 KIF3BO15066 747 aa24.01■■□□□ 1.43
COMMD4-217ENST00000567195 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
COMMD4-217ENST00000567195 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
COMMD4-217ENST00000567195 CNTLNQ9NXG0 1405 aa23.99■■□□□ 1.43
COMMD4-217ENST00000567195 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
COMMD4-217ENST00000567195 ANKRD30AQ9BXX3 1397 aa23.98■■□□□ 1.43
COMMD4-217ENST00000567195 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
COMMD4-217ENST00000567195 KIF15Q9NS87 1388 aa23.96■■□□□ 1.43
COMMD4-217ENST00000567195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.42
COMMD4-217ENST00000567195 CEBPAP49715 358 aaPredicted RBP23.94■■□□□ 1.42
COMMD4-217ENST00000567195 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
COMMD4-217ENST00000567195 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
COMMD4-217ENST00000567195 ADGRL2O95490 1459 aa23.9■■□□□ 1.42
COMMD4-217ENST00000567195 EIF2AK4Q9P2K8 1649 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms