RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 UPF1Q92900 1129 aaKnown RBP eCLIP21.55■■□□□ 1.047e-14■■■■■ 92.7
COMMD4-217ENST00000567195 EFTUD2Q15029 972 aaKnown RBP eCLIP15.06■□□□□ 01e-7■■■■■ 52.3
COMMD4-217ENST00000567195 PCBP2Q15366 365 aaKnown RBP eCLIP14.87□□□□□ -0.031e-11■■■■■ 48
COMMD4-217ENST00000567195 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■■■ 39.9
COMMD4-217ENST00000567195 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.153e-10■■■■■ 33.7
COMMD4-217ENST00000567195 LARP4Q71RC2 724 aaKnown RBP eCLIP14.43□□□□□ -0.14e-6■■■■■ 28.7
COMMD4-217ENST00000567195 GTF2F1P35269 517 aaKnown RBP eCLIP17.05■□□□□ 0.324e-9■■■■■ 28.7
COMMD4-217ENST00000567195 SF3B4Q15427 424 aaKnown RBP eCLIP14.24□□□□□ -0.133e-6■■■■■ 28.5
COMMD4-217ENST00000567195 PPIGQ13427 754 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■■□ 25.8
COMMD4-217ENST00000567195 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.049e-8■■■■□ 25.4
COMMD4-217ENST00000567195 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.291e-8■■■■□ 24.7
COMMD4-217ENST00000567195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.77■□□□□ 0.282e-7■■□□□ 14.4
COMMD4-217ENST00000567195 PABPC4Q13310 644 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■□□□ 13.1
COMMD4-217ENST00000567195 NCBP2P52298 156 aaKnown RBP eCLIP14.49□□□□□ -0.092e-6■■□□□ 13
COMMD4-217ENST00000567195 DDX3XO00571 662 aaKnown RBP eCLIP16.22■□□□□ 0.193e-7■■□□□ 12.4
COMMD4-217ENST00000567195 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■□□□□ 9.5
Retrieved 16 of 16 RNA–protein pairs in 5.3 ms