RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 MIA2Q96PC5 1412 aa23.94■■□□□ 1.42
SNHG20-204ENST00000566583 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
SNHG20-204ENST00000566583 RRBP1Q9P2E9 1410 aaKnown RBP23.92■■□□□ 1.42
SNHG20-204ENST00000566583 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
SNHG20-204ENST00000566583 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
SNHG20-204ENST00000566583 TCOF1Q13428 1488 aaKnown RBP23.9■■□□□ 1.42
SNHG20-204ENST00000566583 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.42
SNHG20-204ENST00000566583 CFAP74Q9C0B2 1584 aa23.88■■□□□ 1.41
SNHG20-204ENST00000566583 FANCAO15360 1455 aa23.86■■□□□ 1.41
SNHG20-204ENST00000566583 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
SNHG20-204ENST00000566583 CAMSAP2Q08AD1 1489 aa23.84■■□□□ 1.41
SNHG20-204ENST00000566583 NEO1Q92859 1461 aa23.84■■□□□ 1.41
SNHG20-204ENST00000566583 ABCC1P33527 1531 aa23.83■■□□□ 1.41
SNHG20-204ENST00000566583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.82■■□□□ 1.4
SNHG20-204ENST00000566583 EFCAB2Q5VUJ9 269 aa23.82■■□□□ 1.4
SNHG20-204ENST00000566583 TEX14Q8IWB6 1497 aa23.81■■□□□ 1.4
SNHG20-204ENST00000566583 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
SNHG20-204ENST00000566583 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
SNHG20-204ENST00000566583 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
SNHG20-204ENST00000566583 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
SNHG20-204ENST00000566583 KIAA1107Q9UPP5 1409 aa23.78■■□□□ 1.4
SNHG20-204ENST00000566583 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
SNHG20-204ENST00000566583 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
SNHG20-204ENST00000566583 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
SNHG20-204ENST00000566583 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
SNHG20-204ENST00000566583 SYCP2Q9BX26 1530 aa23.76■■□□□ 1.39
SNHG20-204ENST00000566583 CROCC2H7BZ55 1655 aa23.75■■□□□ 1.39
SNHG20-204ENST00000566583 ADGRL1O94910 1474 aa23.74■■□□□ 1.39
SNHG20-204ENST00000566583 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
SNHG20-204ENST00000566583 ZNF777Q9ULD5 760 aaPredicted RBP23.72■■□□□ 1.39
SNHG20-204ENST00000566583 SCAPERQ9BY12 1400 aa23.69■■□□□ 1.38
SNHG20-204ENST00000566583 FRMPD1Q5SYB0 1578 aa23.69■■□□□ 1.38
SNHG20-204ENST00000566583 ABCC5O15440 1437 aa23.68■■□□□ 1.38
SNHG20-204ENST00000566583 TRAPPC8Q9Y2L5 1435 aa23.68■■□□□ 1.38
SNHG20-204ENST00000566583 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
SNHG20-204ENST00000566583 DAPK1P53355 1430 aa23.67■■□□□ 1.38
SNHG20-204ENST00000566583 KDM5CP41229 1560 aa23.67■■□□□ 1.38
SNHG20-204ENST00000566583 COL17A1Q9UMD9 1497 aaPredicted RBP23.66■■□□□ 1.38
SNHG20-204ENST00000566583 HNRNPMP52272 730 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNHG20-204ENST00000566583 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
SNHG20-204ENST00000566583 PTPRKQ15262 1439 aa23.65■■□□□ 1.38
SNHG20-204ENST00000566583 POGZQ7Z3K3 1410 aa23.65■■□□□ 1.38
SNHG20-204ENST00000566583 MAST1Q9Y2H9 1570 aa23.65■■□□□ 1.38
SNHG20-204ENST00000566583 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.38
SNHG20-204ENST00000566583 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.37
SNHG20-204ENST00000566583 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
SNHG20-204ENST00000566583 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
SNHG20-204ENST00000566583 ADGBQ8N7X0 1667 aa23.61■■□□□ 1.37
SNHG20-204ENST00000566583 ZNF518AQ6AHZ1 1483 aa23.61■■□□□ 1.37
SNHG20-204ENST00000566583 INO80Q9ULG1 1556 aaPredicted RBP23.61■■□□□ 1.37
SNHG20-204ENST00000566583 ZMYM4Q5VZL5 1548 aa23.6■■□□□ 1.37
SNHG20-204ENST00000566583 KIDINS220Q9ULH0 1771 aa23.59■■□□□ 1.37
SNHG20-204ENST00000566583 KDM6BO15054 1643 aa23.57■■□□□ 1.36
SNHG20-204ENST00000566583 AFAP1Q8N556 730 aa23.57■■□□□ 1.36
SNHG20-204ENST00000566583 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
SNHG20-204ENST00000566583 ZFYVE16Q7Z3T8 1539 aa23.56■■□□□ 1.36
SNHG20-204ENST00000566583 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
SNHG20-204ENST00000566583 MLH3Q9UHC1 1453 aa23.55■■□□□ 1.36
SNHG20-204ENST00000566583 C9orf84Q5VXU9 1444 aa23.55■■□□□ 1.36
SNHG20-204ENST00000566583 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
SNHG20-204ENST00000566583 RTEL1-TNFRSF6BF6WH68 1400 aa23.54■■□□□ 1.36
SNHG20-204ENST00000566583 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
SNHG20-204ENST00000566583 ATP7AQ04656 1500 aa23.53■■□□□ 1.36
SNHG20-204ENST00000566583 ROCK1Q13464 1354 aa23.5■■□□□ 1.35
SNHG20-204ENST00000566583 GCC2Q8IWJ2 1684 aa23.5■■□□□ 1.35
SNHG20-204ENST00000566583 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
SNHG20-204ENST00000566583 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
SNHG20-204ENST00000566583 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
SNHG20-204ENST00000566583 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
SNHG20-204ENST00000566583 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
SNHG20-204ENST00000566583 ITGAEP38570 1179 aa23.48■■□□□ 1.35
SNHG20-204ENST00000566583 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
SNHG20-204ENST00000566583 DIP2CQ9Y2E4 1556 aa23.46■■□□□ 1.35
SNHG20-204ENST00000566583 CHIC2Q9UKJ5 165 aa23.44■■□□□ 1.34
SNHG20-204ENST00000566583 ARHGEF40Q8TER5 1519 aa23.44■■□□□ 1.34
SNHG20-204ENST00000566583 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
SNHG20-204ENST00000566583 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
SNHG20-204ENST00000566583 YEATS2Q9ULM3 1422 aa23.43■■□□□ 1.34
SNHG20-204ENST00000566583 NAIPQ13075 1403 aa23.42■■□□□ 1.34
SNHG20-204ENST00000566583 REREQ9P2R6 1566 aa23.39■■□□□ 1.34
SNHG20-204ENST00000566583 DUOX2Q9NRD8 1548 aa23.39■■□□□ 1.33
SNHG20-204ENST00000566583 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
SNHG20-204ENST00000566583 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
SNHG20-204ENST00000566583 BCORL1Q5H9F3 1711 aa23.37■■□□□ 1.33
SNHG20-204ENST00000566583 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
SNHG20-204ENST00000566583 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
SNHG20-204ENST00000566583 EIF2AK4Q9P2K8 1649 aaKnown RBP23.34■■□□□ 1.33
SNHG20-204ENST00000566583 ATP10AO60312 1499 aa23.34■■□□□ 1.33
SNHG20-204ENST00000566583 A2MP01023 1474 aa23.33■■□□□ 1.33
SNHG20-204ENST00000566583 DHX29Q7Z478 1369 aaKnown RBP23.32■■□□□ 1.32
SNHG20-204ENST00000566583 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
SNHG20-204ENST00000566583 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
SNHG20-204ENST00000566583 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
SNHG20-204ENST00000566583 AGLP35573 1532 aa23.29■■□□□ 1.32
SNHG20-204ENST00000566583 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
SNHG20-204ENST00000566583 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
SNHG20-204ENST00000566583 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
SNHG20-204ENST00000566583 UNC13BO14795 1591 aa23.26■■□□□ 1.31
SNHG20-204ENST00000566583 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
SNHG20-204ENST00000566583 MROH1Q8NDA8 1641 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms