RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
SNHG20-204ENST00000566583 CCDC180Q9P1Z9 1646 aa32.56■■■□□ 2.8
SNHG20-204ENST00000566583 ABCC9O60706 1549 aa31.13■■■□□ 2.57
SNHG20-204ENST00000566583 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
SNHG20-204ENST00000566583 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
SNHG20-204ENST00000566583 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
SNHG20-204ENST00000566583 NACADO15069 1562 aa30.4■■■□□ 2.46
SNHG20-204ENST00000566583 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
SNHG20-204ENST00000566583 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.44
SNHG20-204ENST00000566583 UNC13AQ9UPW8 1703 aa29.77■■■□□ 2.36
SNHG20-204ENST00000566583 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
SNHG20-204ENST00000566583 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
SNHG20-204ENST00000566583 SHROOM4Q9ULL8 1493 aa29.32■■■□□ 2.28
SNHG20-204ENST00000566583 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.25
SNHG20-204ENST00000566583 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
SNHG20-204ENST00000566583 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
SNHG20-204ENST00000566583 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
SNHG20-204ENST00000566583 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
SNHG20-204ENST00000566583 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
SNHG20-204ENST00000566583 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
SNHG20-204ENST00000566583 CC2D2AQ9P2K1 1620 aa28.27■■■□□ 2.12
SNHG20-204ENST00000566583 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
SNHG20-204ENST00000566583 WIZO95785 1651 aa28.16■■■□□ 2.1
SNHG20-204ENST00000566583 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
SNHG20-204ENST00000566583 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
SNHG20-204ENST00000566583 DNAJC5BQ9UF47 199 aa28.06■■■□□ 2.08
SNHG20-204ENST00000566583 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
SNHG20-204ENST00000566583 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
SNHG20-204ENST00000566583 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.06
SNHG20-204ENST00000566583 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
SNHG20-204ENST00000566583 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
SNHG20-204ENST00000566583 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
SNHG20-204ENST00000566583 CFTRP13569 1480 aa27.22■■□□□ 1.95
SNHG20-204ENST00000566583 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
SNHG20-204ENST00000566583 PRDM2Q13029 1718 aa27.2■■□□□ 1.95
SNHG20-204ENST00000566583 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.94
SNHG20-204ENST00000566583 NESP48681 1621 aa27.17■■□□□ 1.94
SNHG20-204ENST00000566583 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.9
SNHG20-204ENST00000566583 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
SNHG20-204ENST00000566583 FANCD2Q9BXW9 1451 aa26.89■■□□□ 1.9
SNHG20-204ENST00000566583 CEP164Q9UPV0 1460 aa26.79■■□□□ 1.88
SNHG20-204ENST00000566583 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
SNHG20-204ENST00000566583 ABCC8Q09428 1581 aa26.7■■□□□ 1.87
SNHG20-204ENST00000566583 THOC2Q8NI27 1593 aaKnown RBP26.7■■□□□ 1.87
SNHG20-204ENST00000566583 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
SNHG20-204ENST00000566583 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
SNHG20-204ENST00000566583 CUX1P39880 1505 aa26.62■■□□□ 1.85
SNHG20-204ENST00000566583 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
SNHG20-204ENST00000566583 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
SNHG20-204ENST00000566583 WDR62O43379 1518 aa26.6■■□□□ 1.85
SNHG20-204ENST00000566583 WRNQ14191 1432 aaPredicted RBP eCLIP26.6■■□□□ 1.85
SNHG20-204ENST00000566583 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
SNHG20-204ENST00000566583 TOPBP1Q92547 1522 aa26.57■■□□□ 1.84
SNHG20-204ENST00000566583 TOP2BQ02880 1626 aa26.56■■□□□ 1.84
SNHG20-204ENST00000566583 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.83
SNHG20-204ENST00000566583 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
SNHG20-204ENST00000566583 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
SNHG20-204ENST00000566583 CUX2O14529 1486 aa26.34■■□□□ 1.81
SNHG20-204ENST00000566583 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
SNHG20-204ENST00000566583 WDR97A6NE52 1622 aa26.29■■□□□ 1.8
SNHG20-204ENST00000566583 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
SNHG20-204ENST00000566583 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
SNHG20-204ENST00000566583 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
SNHG20-204ENST00000566583 SOGA1O94964 1423 aa26.22■■□□□ 1.79
SNHG20-204ENST00000566583 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
SNHG20-204ENST00000566583 ABCA5Q8WWZ7 1642 aa26.09■■□□□ 1.77
SNHG20-204ENST00000566583 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
SNHG20-204ENST00000566583 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
SNHG20-204ENST00000566583 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
SNHG20-204ENST00000566583 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
SNHG20-204ENST00000566583 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
SNHG20-204ENST00000566583 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
SNHG20-204ENST00000566583 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.753e-10■■□□□ 14.3
SNHG20-204ENST00000566583 GAPVD1Q14C86 1478 aa25.96■■□□□ 1.75
SNHG20-204ENST00000566583 EEA1Q15075 1411 aa25.9■■□□□ 1.74
SNHG20-204ENST00000566583 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.73
SNHG20-204ENST00000566583 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
SNHG20-204ENST00000566583 IGF1RP08069 1367 aa25.83■■□□□ 1.73
SNHG20-204ENST00000566583 CUL7Q14999 1698 aa25.78■■□□□ 1.72
SNHG20-204ENST00000566583 ADAMTS12P58397 1594 aa25.76■■□□□ 1.71
SNHG20-204ENST00000566583 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
SNHG20-204ENST00000566583 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
SNHG20-204ENST00000566583 CSRNP3Q8WYN3 585 aa25.73■■□□□ 1.71
SNHG20-204ENST00000566583 PRXQ9BXM0 1461 aa25.7■■□□□ 1.71
SNHG20-204ENST00000566583 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.71
SNHG20-204ENST00000566583 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
SNHG20-204ENST00000566583 KIF21BO75037 1637 aa25.67■■□□□ 1.7
SNHG20-204ENST00000566583 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
SNHG20-204ENST00000566583 CHD1O14646 1710 aa25.64■■□□□ 1.7
SNHG20-204ENST00000566583 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
SNHG20-204ENST00000566583 RAPGEF2Q9Y4G8 1499 aa25.59■■□□□ 1.69
SNHG20-204ENST00000566583 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
SNHG20-204ENST00000566583 GOLGA3Q08378 1498 aa25.48■■□□□ 1.67
SNHG20-204ENST00000566583 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
SNHG20-204ENST00000566583 NUP160Q12769 1436 aa25.45■■□□□ 1.66
SNHG20-204ENST00000566583 CEP170Q5SW79 1584 aa25.45■■□□□ 1.66
SNHG20-204ENST00000566583 CTTNBP2Q8WZ74 1663 aa25.45■■□□□ 1.66
SNHG20-204ENST00000566583 FBLN2P98095 1184 aa25.38■■□□□ 1.65
SNHG20-204ENST00000566583 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
SNHG20-204ENST00000566583 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms