RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 PLCH2O75038 1416 aa27.98■■■□□ 2.07
EDC3-208ENST00000565602 MIA2Q96PC5 1412 aa27.98■■■□□ 2.07
EDC3-208ENST00000565602 PTPN23Q9H3S7 1636 aa27.98■■■□□ 2.07
EDC3-208ENST00000565602 CD109Q6YHK3 1445 aa27.94■■■□□ 2.06
EDC3-208ENST00000565602 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
EDC3-208ENST00000565602 ARHGAP5Q13017 1502 aa27.94■■■□□ 2.06
EDC3-208ENST00000565602 PPRC1Q5VV67 1664 aaKnown RBP27.94■■■□□ 2.06
EDC3-208ENST00000565602 TCOF1Q13428 1488 aaKnown RBP27.93■■■□□ 2.06
EDC3-208ENST00000565602 ZEB1P37275 1124 aaPredicted RBP27.92■■■□□ 2.06
EDC3-208ENST00000565602 SAMD9LQ8IVG5 1584 aa27.92■■■□□ 2.06
EDC3-208ENST00000565602 CFDP1Q9UEE9 299 aaPredicted RBP27.91■■■□□ 2.06
EDC3-208ENST00000565602 TSPOAP1O95153 1857 aa27.9■■■□□ 2.06
EDC3-208ENST00000565602 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.05
EDC3-208ENST00000565602 ZNF644Q9H582 1327 aaPredicted RBP27.87■■■□□ 2.05
EDC3-208ENST00000565602 FANCAO15360 1455 aa27.86■■■□□ 2.05
EDC3-208ENST00000565602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.84■■■□□ 2.052e-11■□□□□ 9.6
EDC3-208ENST00000565602 CFAP74Q9C0B2 1584 aa27.84■■■□□ 2.05
EDC3-208ENST00000565602 ABCC1P33527 1531 aa27.81■■■□□ 2.04
EDC3-208ENST00000565602 EFCAB2Q5VUJ9 269 aa27.81■■■□□ 2.04
EDC3-208ENST00000565602 ZNF777Q9ULD5 760 aaPredicted RBP27.81■■■□□ 2.04
EDC3-208ENST00000565602 FAM50AQ14320 339 aaKnown RBP27.79■■■□□ 2.04
EDC3-208ENST00000565602 SYCP2Q9BX26 1530 aa27.78■■■□□ 2.04
EDC3-208ENST00000565602 DNMT1P26358 1616 aaKnown RBP27.78■■■□□ 2.04
EDC3-208ENST00000565602 ARHGEF12Q9NZN5 1544 aa27.77■■■□□ 2.04
EDC3-208ENST00000565602 NEO1Q92859 1461 aa27.77■■■□□ 2.04
EDC3-208ENST00000565602 MBD5Q9P267 1494 aa27.76■■■□□ 2.03
EDC3-208ENST00000565602 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
EDC3-208ENST00000565602 PLEKHH2Q8IVE3 1493 aa27.75■■■□□ 2.03
EDC3-208ENST00000565602 ARHGEF5Q12774 1597 aa27.75■■■□□ 2.03
EDC3-208ENST00000565602 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
EDC3-208ENST00000565602 KIAA1107Q9UPP5 1409 aa27.74■■■□□ 2.03
EDC3-208ENST00000565602 TEX14Q8IWB6 1497 aa27.73■■■□□ 2.03
EDC3-208ENST00000565602 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
EDC3-208ENST00000565602 ADGRL1O94910 1474 aa27.72■■■□□ 2.03
EDC3-208ENST00000565602 TRHP20396 242 aaPredicted RBP27.72■■■□□ 2.03
EDC3-208ENST00000565602 ABCC5O15440 1437 aa27.7■■■□□ 2.02
EDC3-208ENST00000565602 DAPK1P53355 1430 aa27.7■■■□□ 2.02
EDC3-208ENST00000565602 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
EDC3-208ENST00000565602 HNRNPMP52272 730 aaKnown RBP eCLIP27.68■■■□□ 2.02
EDC3-208ENST00000565602 SCAPERQ9BY12 1400 aa27.66■■■□□ 2.02
EDC3-208ENST00000565602 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
EDC3-208ENST00000565602 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
EDC3-208ENST00000565602 RICTORQ6R327 1708 aa27.63■■■□□ 2.01
EDC3-208ENST00000565602 ITGAEP38570 1179 aa27.63■■■□□ 2.01
EDC3-208ENST00000565602 SHANK2Q9UPX8 1470 aa27.61■■■□□ 2.01
EDC3-208ENST00000565602 FRMPD1Q5SYB0 1578 aa27.6■■■□□ 2.01
EDC3-208ENST00000565602 ADGBQ8N7X0 1667 aa27.6■■■□□ 2.01
EDC3-208ENST00000565602 POGZQ7Z3K3 1410 aa27.6■■■□□ 2.01
EDC3-208ENST00000565602 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
EDC3-208ENST00000565602 KDM5CP41229 1560 aa27.58■■■□□ 2.01
EDC3-208ENST00000565602 RSPH4AQ5TD94 716 aa27.57■■■□□ 2
EDC3-208ENST00000565602 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
EDC3-208ENST00000565602 ZNF518AQ6AHZ1 1483 aa27.56■■■□□ 2
EDC3-208ENST00000565602 COL17A1Q9UMD9 1497 aaPredicted RBP27.56■■■□□ 2
EDC3-208ENST00000565602 C9orf84Q5VXU9 1444 aa27.55■■■□□ 2
EDC3-208ENST00000565602 AFAP1Q8N556 730 aa27.55■■■□□ 2
EDC3-208ENST00000565602 INO80Q9ULG1 1556 aaPredicted RBP27.54■■■□□ 2
EDC3-208ENST00000565602 ADGRL2O95490 1459 aa27.53■■■□□ 2
EDC3-208ENST00000565602 ZFYVE16Q7Z3T8 1539 aa27.53■■■□□ 2
EDC3-208ENST00000565602 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
EDC3-208ENST00000565602 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
EDC3-208ENST00000565602 RAPGEF3O95398 923 aa27.5■■□□□ 1.99
EDC3-208ENST00000565602 ROCK1Q13464 1354 aa27.49■■□□□ 1.99
EDC3-208ENST00000565602 PLXNC1O60486 1568 aa27.49■■□□□ 1.99
EDC3-208ENST00000565602 HECW2Q9P2P5 1572 aa27.49■■□□□ 1.99
EDC3-208ENST00000565602 ZMYM4Q5VZL5 1548 aa27.48■■□□□ 1.99
EDC3-208ENST00000565602 GCC2Q8IWJ2 1684 aa27.48■■□□□ 1.99
EDC3-208ENST00000565602 TSPY4P0CV99 314 aa27.48■■□□□ 1.99
EDC3-208ENST00000565602 TSPY10P0CW01 314 aa27.48■■□□□ 1.99
EDC3-208ENST00000565602 ATP7AQ04656 1500 aa27.48■■□□□ 1.99
EDC3-208ENST00000565602 NCOA1Q15788 1441 aa27.47■■□□□ 1.99
EDC3-208ENST00000565602 RTEL1-TNFRSF6BF6WH68 1400 aa27.46■■□□□ 1.99
EDC3-208ENST00000565602 MLH3Q9UHC1 1453 aa27.45■■□□□ 1.98
EDC3-208ENST00000565602 KDM6BO15054 1643 aa27.45■■□□□ 1.98
EDC3-208ENST00000565602 SPAG9O60271 1321 aaKnown RBP27.44■■□□□ 1.98
EDC3-208ENST00000565602 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
EDC3-208ENST00000565602 NAIPQ13075 1403 aa27.42■■□□□ 1.98
EDC3-208ENST00000565602 ANKRD30AQ9BXX3 1397 aa27.42■■□□□ 1.98
EDC3-208ENST00000565602 ABCA6Q8N139 1617 aa27.4■■□□□ 1.98
EDC3-208ENST00000565602 RRP7BPQ9NSQ0 103 aa27.4■■□□□ 1.98
EDC3-208ENST00000565602 KIF15Q9NS87 1388 aa27.36■■□□□ 1.97
EDC3-208ENST00000565602 DIP2CQ9Y2E4 1556 aa27.36■■□□□ 1.97
EDC3-208ENST00000565602 MAGI2Q86UL8 1455 aa27.34■■□□□ 1.97
EDC3-208ENST00000565602 SETD5Q9C0A6 1442 aa27.34■■□□□ 1.97
EDC3-208ENST00000565602 YEATS2Q9ULM3 1422 aa27.34■■□□□ 1.97
EDC3-208ENST00000565602 DHX57Q6P158 1386 aaKnown RBP27.33■■□□□ 1.97
EDC3-208ENST00000565602 DUOX2Q9NRD8 1548 aa27.32■■□□□ 1.96
EDC3-208ENST00000565602 ARHGEF40Q8TER5 1519 aa27.3■■□□□ 1.96
EDC3-208ENST00000565602 RAB3GAP2Q9H2M9 1393 aa27.3■■□□□ 1.96
EDC3-208ENST00000565602 ANKRD50Q9ULJ7 1429 aa27.28■■□□□ 1.96
EDC3-208ENST00000565602 MYT1LQ9UL68 1186 aa27.27■■□□□ 1.96
EDC3-208ENST00000565602 CLSPNQ9HAW4 1339 aa27.27■■□□□ 1.96
EDC3-208ENST00000565602 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
EDC3-208ENST00000565602 A2MP01023 1474 aa27.24■■□□□ 1.95
EDC3-208ENST00000565602 EIF2AK4Q9P2K8 1649 aaKnown RBP27.23■■□□□ 1.95
EDC3-208ENST00000565602 SIGLEC1Q9BZZ2 1709 aa27.23■■□□□ 1.95
EDC3-208ENST00000565602 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
EDC3-208ENST00000565602 REREQ9P2R6 1566 aa27.23■■□□□ 1.95
EDC3-208ENST00000565602 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
EDC3-208ENST00000565602 ATP10AO60312 1499 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms