RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FANCD2Q9BXW9 1451 aa27.68■■■□□ 2.02
MAP1LC3B-206ENST00000564844 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
MAP1LC3B-206ENST00000564844 KDM6BO15054 1643 aa27.65■■■□□ 2.02
MAP1LC3B-206ENST00000564844 SKAP1Q86WV1 359 aa27.64■■■□□ 2.01
MAP1LC3B-206ENST00000564844 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
MAP1LC3B-206ENST00000564844 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
MAP1LC3B-206ENST00000564844 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
MAP1LC3B-206ENST00000564844 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
MAP1LC3B-206ENST00000564844 EXOC6Q8TAG9 804 aa27.57■■■□□ 2
MAP1LC3B-206ENST00000564844 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
MAP1LC3B-206ENST00000564844 EFCAB5A4FU69 1503 aa27.54■■■□□ 2
MAP1LC3B-206ENST00000564844 KDM2AQ9Y2K7 1162 aa27.52■■■□□ 2
MAP1LC3B-206ENST00000564844 NEFMP07197 916 aa27.52■■■□□ 2
MAP1LC3B-206ENST00000564844 SMG6Q86US8 1419 aaKnown RBP27.51■■□□□ 1.99
MAP1LC3B-206ENST00000564844 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.5■■□□□ 1.99
MAP1LC3B-206ENST00000564844 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
MAP1LC3B-206ENST00000564844 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
MAP1LC3B-206ENST00000564844 PLIN1O60240 522 aa27.46■■□□□ 1.99
MAP1LC3B-206ENST00000564844 PNISRQ8TF01 805 aaKnown RBP27.46■■□□□ 1.99
MAP1LC3B-206ENST00000564844 ANKRD30BQ9BXX2 1392 aa27.46■■□□□ 1.99
MAP1LC3B-206ENST00000564844 SUPT6HQ7KZ85 1726 aaKnown RBP27.43■■□□□ 1.98
MAP1LC3B-206ENST00000564844 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
MAP1LC3B-206ENST00000564844 DHX29Q7Z478 1369 aaKnown RBP27.41■■□□□ 1.98
MAP1LC3B-206ENST00000564844 PDE4AP27815 886 aa27.41■■□□□ 1.98
MAP1LC3B-206ENST00000564844 SLC4A3P48751 1232 aa27.41■■□□□ 1.98
MAP1LC3B-206ENST00000564844 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
MAP1LC3B-206ENST00000564844 TOPBP1Q92547 1522 aa27.41■■□□□ 1.98
MAP1LC3B-206ENST00000564844 USP47Q96K76 1375 aa27.4■■□□□ 1.98
MAP1LC3B-206ENST00000564844 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
MAP1LC3B-206ENST00000564844 CDCA7LQ96GN5 454 aa27.38■■□□□ 1.97
MAP1LC3B-206ENST00000564844 SPATA31E1Q6ZUB1 1445 aa27.38■■□□□ 1.97
MAP1LC3B-206ENST00000564844 UGGT2Q9NYU1 1516 aa27.37■■□□□ 1.97
MAP1LC3B-206ENST00000564844 RRP1P56182 461 aaKnown RBP27.36■■□□□ 1.97
MAP1LC3B-206ENST00000564844 RNF123Q5XPI4 1314 aa27.35■■□□□ 1.97
MAP1LC3B-206ENST00000564844 CARD11Q9BXL7 1154 aa27.35■■□□□ 1.97
MAP1LC3B-206ENST00000564844 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
MAP1LC3B-206ENST00000564844 PKD2Q13563 968 aa27.35■■□□□ 1.97
MAP1LC3B-206ENST00000564844 RCAN3Q9UKA8 241 aa27.35■■□□□ 1.97
MAP1LC3B-206ENST00000564844 EHBP1L1Q8N3D4 1523 aa27.34■■□□□ 1.97
MAP1LC3B-206ENST00000564844 RPRD2Q5VT52 1461 aaKnown RBP27.34■■□□□ 1.97
MAP1LC3B-206ENST00000564844 FBLN2P98095 1184 aa27.33■■□□□ 1.97
MAP1LC3B-206ENST00000564844 ST20-MTHFSA0A0A6YYL1 179 aa27.32■■□□□ 1.96
MAP1LC3B-206ENST00000564844 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
MAP1LC3B-206ENST00000564844 TEX14Q8IWB6 1497 aa27.3■■□□□ 1.96
MAP1LC3B-206ENST00000564844 HECW1Q76N89 1606 aa27.29■■□□□ 1.96
MAP1LC3B-206ENST00000564844 DNMBPQ6XZF7 1577 aa27.28■■□□□ 1.96
MAP1LC3B-206ENST00000564844 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
MAP1LC3B-206ENST00000564844 BRPF3Q9ULD4 1205 aa27.25■■□□□ 1.95
MAP1LC3B-206ENST00000564844 BACH2Q9BYV9 841 aa27.24■■□□□ 1.95
MAP1LC3B-206ENST00000564844 TCERG1O14776 1098 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3B-206ENST00000564844 CC2D1BQ5T0F9 858 aaKnown RBP27.22■■□□□ 1.95
MAP1LC3B-206ENST00000564844 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
MAP1LC3B-206ENST00000564844 DCAF11Q8TEB1 546 aa27.21■■□□□ 1.95
MAP1LC3B-206ENST00000564844 CUL7Q14999 1698 aa27.21■■□□□ 1.95
MAP1LC3B-206ENST00000564844 EPRSP07814 1512 aaKnown RBP27.21■■□□□ 1.95
MAP1LC3B-206ENST00000564844 DAPK1P53355 1430 aa27.2■■□□□ 1.94
MAP1LC3B-206ENST00000564844 ABCC5O15440 1437 aa27.2■■□□□ 1.94
MAP1LC3B-206ENST00000564844 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
MAP1LC3B-206ENST00000564844 TCOF1Q13428 1488 aaKnown RBP27.19■■□□□ 1.94
MAP1LC3B-206ENST00000564844 GCC2Q8IWJ2 1684 aa27.19■■□□□ 1.94
MAP1LC3B-206ENST00000564844 CRBNQ96SW2 442 aa27.18■■□□□ 1.94
MAP1LC3B-206ENST00000564844 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
MAP1LC3B-206ENST00000564844 SAMD9Q5K651 1589 aa27.17■■□□□ 1.94
MAP1LC3B-206ENST00000564844 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
MAP1LC3B-206ENST00000564844 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
MAP1LC3B-206ENST00000564844 RGL3Q3MIN7 710 aa27.15■■□□□ 1.94
MAP1LC3B-206ENST00000564844 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
MAP1LC3B-206ENST00000564844 C20orf194Q5TEA3 1177 aa27.14■■□□□ 1.94
MAP1LC3B-206ENST00000564844 MYBBP1AQ9BQG0 1328 aaKnown RBP27.13■■□□□ 1.93
MAP1LC3B-206ENST00000564844 EIF5BO60841 1220 aaKnown RBP27.1■■□□□ 1.93
MAP1LC3B-206ENST00000564844 KIF15Q9NS87 1388 aa27.1■■□□□ 1.93
MAP1LC3B-206ENST00000564844 MIA2Q96PC5 1412 aa27.1■■□□□ 1.93
MAP1LC3B-206ENST00000564844 DAXXQ9UER7 740 aaPredicted RBP27.1■■□□□ 1.93
MAP1LC3B-206ENST00000564844 PPM1GO15355 546 aaPredicted RBP27.05■■□□□ 1.92
MAP1LC3B-206ENST00000564844 RGS3P49796 1198 aa27.05■■□□□ 1.92
MAP1LC3B-206ENST00000564844 NFKBIBQ15653 356 aa27.05■■□□□ 1.92
MAP1LC3B-206ENST00000564844 PZPP20742 1482 aa27.04■■□□□ 1.92
MAP1LC3B-206ENST00000564844 NUP155O75694 1391 aa27.03■■□□□ 1.92
MAP1LC3B-206ENST00000564844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.925e-8■□□□□ 8.4
MAP1LC3B-206ENST00000564844 RALBP1Q15311 655 aa27.02■■□□□ 1.92
MAP1LC3B-206ENST00000564844 FRAT1Q92837 279 aaPredicted RBP27.01■■□□□ 1.91
MAP1LC3B-206ENST00000564844 LRPPRCP42704 1394 aaKnown RBP27.01■■□□□ 1.91
MAP1LC3B-206ENST00000564844 NBPF1Q3BBV0 1214 aa27.01■■□□□ 1.91
MAP1LC3B-206ENST00000564844 NLRP13Q86W25 1043 aa27.01■■□□□ 1.91
MAP1LC3B-206ENST00000564844 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
MAP1LC3B-206ENST00000564844 GSE1Q14687 1217 aa27■■□□□ 1.91
MAP1LC3B-206ENST00000564844 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
MAP1LC3B-206ENST00000564844 ROCK1Q13464 1354 aa26.99■■□□□ 1.91
MAP1LC3B-206ENST00000564844 PRG4Q92954 1404 aaPredicted RBP26.98■■□□□ 1.91
MAP1LC3B-206ENST00000564844 KIAA1107Q9UPP5 1409 aa26.98■■□□□ 1.91
MAP1LC3B-206ENST00000564844 LAMC3Q9Y6N6 1575 aa26.98■■□□□ 1.91
MAP1LC3B-206ENST00000564844 USP35Q9P2H5 1018 aa26.98■■□□□ 1.91
MAP1LC3B-206ENST00000564844 MS4A1P11836 297 aa26.97■■□□□ 1.91
MAP1LC3B-206ENST00000564844 ABCA5Q8WWZ7 1642 aa26.96■■□□□ 1.91
MAP1LC3B-206ENST00000564844 ROCK2O75116 1388 aaKnown RBP26.96■■□□□ 1.91
MAP1LC3B-206ENST00000564844 KTN1Q86UP2 1357 aaKnown RBP26.94■■□□□ 1.9
MAP1LC3B-206ENST00000564844 FRAT2O75474 233 aaPredicted RBP26.92■■□□□ 1.9
MAP1LC3B-206ENST00000564844 ARXQ96QS3 562 aa26.91■■□□□ 1.9
MAP1LC3B-206ENST00000564844 PANK3Q9H999 370 aa26.91■■□□□ 1.9
MAP1LC3B-206ENST00000564844 DDRGK1Q96HY6 314 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms