RNA–Protein interactions for RNA: ENST00000564648.1

COX4I1-207, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-207ENST00000564648 PTPRGP23470 1445 aa13.59□□□□□ -0.23
COX4I1-207ENST00000564648 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
COX4I1-207ENST00000564648 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
COX4I1-207ENST00000564648 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
COX4I1-207ENST00000564648 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
COX4I1-207ENST00000564648 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
COX4I1-207ENST00000564648 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
COX4I1-207ENST00000564648 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
COX4I1-207ENST00000564648 FBXO41Q8TF61 875 aa13.55□□□□□ -0.24
COX4I1-207ENST00000564648 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
COX4I1-207ENST00000564648 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
COX4I1-207ENST00000564648 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
COX4I1-207ENST00000564648 ABCA8O94911 1581 aa13.54□□□□□ -0.24
COX4I1-207ENST00000564648 RAPGEF6Q8TEU7 1601 aa13.54□□□□□ -0.24
COX4I1-207ENST00000564648 FKBP8Q14318 412 aa13.54□□□□□ -0.24
COX4I1-207ENST00000564648 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
COX4I1-207ENST00000564648 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
COX4I1-207ENST00000564648 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
COX4I1-207ENST00000564648 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
COX4I1-207ENST00000564648 KDM5BQ9UGL1 1544 aa13.49□□□□□ -0.25
COX4I1-207ENST00000564648 ZCCHC11Q5TAX3 1644 aaKnown RBP13.47□□□□□ -0.25
COX4I1-207ENST00000564648 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
COX4I1-207ENST00000564648 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.25
COX4I1-207ENST00000564648 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
COX4I1-207ENST00000564648 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
COX4I1-207ENST00000564648 ATP10BO94823 1461 aa13.45□□□□□ -0.26
COX4I1-207ENST00000564648 ARID3CA6NKF2 412 aa13.45□□□□□ -0.26
COX4I1-207ENST00000564648 POLA2Q14181 598 aa13.44□□□□□ -0.26
COX4I1-207ENST00000564648 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
COX4I1-207ENST00000564648 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
COX4I1-207ENST00000564648 ABCB7O75027 752 aa13.4□□□□□ -0.26
COX4I1-207ENST00000564648 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
COX4I1-207ENST00000564648 TROQ12816 1431 aaPredicted RBP13.39□□□□□ -0.27
COX4I1-207ENST00000564648 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
COX4I1-207ENST00000564648 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
COX4I1-207ENST00000564648 MYOM3Q5VTT5 1437 aa13.36□□□□□ -0.27
COX4I1-207ENST00000564648 CD109Q6YHK3 1445 aa13.36□□□□□ -0.27
COX4I1-207ENST00000564648 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
COX4I1-207ENST00000564648 PTPRMP28827 1452 aa13.35□□□□□ -0.27
COX4I1-207ENST00000564648 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
COX4I1-207ENST00000564648 ADAMTSL3P82987 1691 aa13.34□□□□□ -0.27
COX4I1-207ENST00000564648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.34□□□□□ -0.27
COX4I1-207ENST00000564648 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
COX4I1-207ENST00000564648 KIF14Q15058 1648 aa13.32□□□□□ -0.28
COX4I1-207ENST00000564648 TCOF1Q13428 1488 aaKnown RBP13.31□□□□□ -0.28
COX4I1-207ENST00000564648 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
COX4I1-207ENST00000564648 ARAP3Q8WWN8 1544 aa13.3□□□□□ -0.28
COX4I1-207ENST00000564648 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
COX4I1-207ENST00000564648 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
COX4I1-207ENST00000564648 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
COX4I1-207ENST00000564648 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
COX4I1-207ENST00000564648 PTPN23Q9H3S7 1636 aa13.27□□□□□ -0.29
COX4I1-207ENST00000564648 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.29
COX4I1-207ENST00000564648 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
COX4I1-207ENST00000564648 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
COX4I1-207ENST00000564648 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
COX4I1-207ENST00000564648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■□□□□ 8.8
COX4I1-207ENST00000564648 DSG3P32926 999 aa13.22□□□□□ -0.29
COX4I1-207ENST00000564648 ITGAEP38570 1179 aa13.22□□□□□ -0.29
COX4I1-207ENST00000564648 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
COX4I1-207ENST00000564648 CDC42BPAQ5VT25 1732 aa13.21□□□□□ -0.3
COX4I1-207ENST00000564648 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
COX4I1-207ENST00000564648 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
COX4I1-207ENST00000564648 ILDR2Q71H61 639 aa13.2□□□□□ -0.3
COX4I1-207ENST00000564648 CFDP1Q9UEE9 299 aaPredicted RBP13.2□□□□□ -0.3
COX4I1-207ENST00000564648 RIMS1Q86UR5 1692 aaKnown RBP13.2□□□□□ -0.3
COX4I1-207ENST00000564648 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
COX4I1-207ENST00000564648 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
COX4I1-207ENST00000564648 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
COX4I1-207ENST00000564648 SOCS7O14512 581 aa13.19□□□□□ -0.3
COX4I1-207ENST00000564648 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
COX4I1-207ENST00000564648 HRCP23327 699 aa13.18□□□□□ -0.3
COX4I1-207ENST00000564648 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
COX4I1-207ENST00000564648 ABCC5O15440 1437 aa13.18□□□□□ -0.3
COX4I1-207ENST00000564648 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
COX4I1-207ENST00000564648 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
COX4I1-207ENST00000564648 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
COX4I1-207ENST00000564648 DISP3Q9P2K9 1392 aa13.17□□□□□ -0.3
COX4I1-207ENST00000564648 HSPA2P54652 639 aa13.16□□□□□ -0.3
COX4I1-207ENST00000564648 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
COX4I1-207ENST00000564648 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
COX4I1-207ENST00000564648 NEO1Q92859 1461 aa13.16□□□□□ -0.3
COX4I1-207ENST00000564648 PLCH2O75038 1416 aa13.15□□□□□ -0.3
COX4I1-207ENST00000564648 DAPK1P53355 1430 aa13.15□□□□□ -0.3
COX4I1-207ENST00000564648 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
COX4I1-207ENST00000564648 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
COX4I1-207ENST00000564648 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
COX4I1-207ENST00000564648 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
COX4I1-207ENST00000564648 SAMD9LQ8IVG5 1584 aa13.13□□□□□ -0.31
COX4I1-207ENST00000564648 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
COX4I1-207ENST00000564648 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
COX4I1-207ENST00000564648 ZNF777Q9ULD5 760 aaPredicted RBP13.13□□□□□ -0.31
COX4I1-207ENST00000564648 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
COX4I1-207ENST00000564648 NAIPQ13075 1403 aa13.12□□□□□ -0.31
COX4I1-207ENST00000564648 MYO5CQ9NQX4 1742 aa13.11□□□□□ -0.31
COX4I1-207ENST00000564648 ROCK1Q13464 1354 aa13.11□□□□□ -0.31
COX4I1-207ENST00000564648 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
COX4I1-207ENST00000564648 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
COX4I1-207ENST00000564648 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
COX4I1-207ENST00000564648 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms