RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 CCNB3Q8WWL7 1395 aa29.53■■■□□ 2.32
SPSB3-204ENST00000563741 FGD6Q6ZV73 1430 aa29.5■■■□□ 2.31
SPSB3-204ENST00000563741 CFAP74Q9C0B2 1584 aa29.5■■■□□ 2.31
SPSB3-204ENST00000563741 PLCH2O75038 1416 aa29.48■■■□□ 2.31
SPSB3-204ENST00000563741 FANCAO15360 1455 aa29.48■■■□□ 2.31
SPSB3-204ENST00000563741 MYO5CQ9NQX4 1742 aa29.48■■■□□ 2.31
SPSB3-204ENST00000563741 AKNAQ7Z591 1439 aa29.44■■■□□ 2.3
SPSB3-204ENST00000563741 GPATCH8Q9UKJ3 1502 aaKnown RBP29.41■■■□□ 2.3
SPSB3-204ENST00000563741 MIA2Q96PC5 1412 aa29.4■■■□□ 2.3
SPSB3-204ENST00000563741 RAPGEF3O95398 923 aa29.38■■■□□ 2.29
SPSB3-204ENST00000563741 EFCAB2Q5VUJ9 269 aa29.38■■■□□ 2.29
SPSB3-204ENST00000563741 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
SPSB3-204ENST00000563741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.37■■■□□ 2.291e-6■■■■□ 25.8
SPSB3-204ENST00000563741 PTPN23Q9H3S7 1636 aa29.36■■■□□ 2.29
SPSB3-204ENST00000563741 DENND4BO75064 1496 aaPredicted RBP29.36■■■□□ 2.29
SPSB3-204ENST00000563741 TCOF1Q13428 1488 aaKnown RBP29.35■■■□□ 2.29
SPSB3-204ENST00000563741 ARHGAP5Q13017 1502 aa29.34■■■□□ 2.29
SPSB3-204ENST00000563741 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
SPSB3-204ENST00000563741 FRMPD1Q5SYB0 1578 aa29.34■■■□□ 2.29
SPSB3-204ENST00000563741 FAM50AQ14320 339 aaKnown RBP29.34■■■□□ 2.29
SPSB3-204ENST00000563741 CDC42BPBQ9Y5S2 1711 aa29.33■■■□□ 2.29
SPSB3-204ENST00000563741 RICTORQ6R327 1708 aa29.32■■■□□ 2.28
SPSB3-204ENST00000563741 ADGRL1O94910 1474 aa29.32■■■□□ 2.28
SPSB3-204ENST00000563741 PREX2Q70Z35 1606 aa29.32■■■□□ 2.28
SPSB3-204ENST00000563741 CFDP1Q9UEE9 299 aaPredicted RBP29.29■■■□□ 2.28
SPSB3-204ENST00000563741 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
SPSB3-204ENST00000563741 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
SPSB3-204ENST00000563741 CAMSAP2Q08AD1 1489 aa29.23■■■□□ 2.27
SPSB3-204ENST00000563741 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
SPSB3-204ENST00000563741 POGZQ7Z3K3 1410 aa29.22■■■□□ 2.27
SPSB3-204ENST00000563741 ZMYM4Q5VZL5 1548 aa29.21■■■□□ 2.27
SPSB3-204ENST00000563741 KDM4FA0A1W2PPD8 638 aa29.2■■■□□ 2.27
SPSB3-204ENST00000563741 ITGAEP38570 1179 aa29.2■■■□□ 2.27
SPSB3-204ENST00000563741 MAGI2Q86UL8 1455 aa29.16■■■□□ 2.26
SPSB3-204ENST00000563741 ZNF777Q9ULD5 760 aaPredicted RBP29.16■■■□□ 2.26
SPSB3-204ENST00000563741 ABCC1P33527 1531 aa29.15■■■□□ 2.26
SPSB3-204ENST00000563741 ARHGEF40Q8TER5 1519 aa29.15■■■□□ 2.26
SPSB3-204ENST00000563741 SAMD9LQ8IVG5 1584 aa29.15■■■□□ 2.26
SPSB3-204ENST00000563741 ZNF518AQ6AHZ1 1483 aa29.14■■■□□ 2.26
SPSB3-204ENST00000563741 PTPRKQ15262 1439 aa29.14■■■□□ 2.26
SPSB3-204ENST00000563741 ZFYVE16Q7Z3T8 1539 aa29.12■■■□□ 2.25
SPSB3-204ENST00000563741 DNMT1P26358 1616 aaKnown RBP29.11■■■□□ 2.25
SPSB3-204ENST00000563741 AFAP1Q8N556 730 aa29.1■■■□□ 2.25
SPSB3-204ENST00000563741 ARHGEF12Q9NZN5 1544 aa29.09■■■□□ 2.25
SPSB3-204ENST00000563741 DAPK1P53355 1430 aa29.09■■■□□ 2.25
SPSB3-204ENST00000563741 KDM5CP41229 1560 aa29.09■■■□□ 2.25
SPSB3-204ENST00000563741 ABCC5O15440 1437 aa29.08■■■□□ 2.25
SPSB3-204ENST00000563741 YEATS2Q9ULM3 1422 aa29.08■■■□□ 2.25
SPSB3-204ENST00000563741 TRAPPC8Q9Y2L5 1435 aa29.06■■■□□ 2.24
SPSB3-204ENST00000563741 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
SPSB3-204ENST00000563741 MBD5Q9P267 1494 aa29.04■■■□□ 2.24
SPSB3-204ENST00000563741 SYCP2Q9BX26 1530 aa29.04■■■□□ 2.24
SPSB3-204ENST00000563741 KIAA1107Q9UPP5 1409 aa29.03■■■□□ 2.24
SPSB3-204ENST00000563741 ARHGEF5Q12774 1597 aa29.02■■■□□ 2.24
SPSB3-204ENST00000563741 HECW2Q9P2P5 1572 aa29.02■■■□□ 2.24
SPSB3-204ENST00000563741 ARID4BQ4LE39 1312 aaPredicted RBP29.01■■■□□ 2.23
SPSB3-204ENST00000563741 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
SPSB3-204ENST00000563741 CROCC2H7BZ55 1655 aa29■■■□□ 2.23
SPSB3-204ENST00000563741 HNRNPMP52272 730 aaKnown RBP eCLIP29■■■□□ 2.23
SPSB3-204ENST00000563741 ATP10AO60312 1499 aa28.99■■■□□ 2.23
SPSB3-204ENST00000563741 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
SPSB3-204ENST00000563741 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
SPSB3-204ENST00000563741 SHANK2Q9UPX8 1470 aa28.97■■■□□ 2.23
SPSB3-204ENST00000563741 BCORL1Q5H9F3 1711 aa28.96■■■□□ 2.23
SPSB3-204ENST00000563741 HFM1A2PYH4 1435 aa28.96■■■□□ 2.23
SPSB3-204ENST00000563741 CHIC2Q9UKJ5 165 aa28.95■■■□□ 2.23
SPSB3-204ENST00000563741 C9orf84Q5VXU9 1444 aa28.95■■■□□ 2.22
SPSB3-204ENST00000563741 ADAMTSL3P82987 1691 aa28.94■■■□□ 2.22
SPSB3-204ENST00000563741 ROCK1Q13464 1354 aa28.93■■■□□ 2.22
SPSB3-204ENST00000563741 SIGLEC1Q9BZZ2 1709 aa28.93■■■□□ 2.22
SPSB3-204ENST00000563741 SETD5Q9C0A6 1442 aa28.92■■■□□ 2.22
SPSB3-204ENST00000563741 KIDINS220Q9ULH0 1771 aa28.92■■■□□ 2.22
SPSB3-204ENST00000563741 DIP2CQ9Y2E4 1556 aa28.92■■■□□ 2.22
SPSB3-204ENST00000563741 RSPH4AQ5TD94 716 aa28.91■■■□□ 2.22
SPSB3-204ENST00000563741 SPAG9O60271 1321 aaKnown RBP28.9■■■□□ 2.22
SPSB3-204ENST00000563741 ABCA6Q8N139 1617 aa28.9■■■□□ 2.22
SPSB3-204ENST00000563741 NAIPQ13075 1403 aa28.9■■■□□ 2.22
SPSB3-204ENST00000563741 ADGRL2O95490 1459 aa28.9■■■□□ 2.22
SPSB3-204ENST00000563741 RAB3GAP2Q9H2M9 1393 aa28.89■■■□□ 2.22
SPSB3-204ENST00000563741 ADGBQ8N7X0 1667 aa28.87■■■□□ 2.21
SPSB3-204ENST00000563741 REREQ9P2R6 1566 aa28.86■■■□□ 2.21
SPSB3-204ENST00000563741 RRP7BPQ9NSQ0 103 aa28.86■■■□□ 2.21
SPSB3-204ENST00000563741 GCC2Q8IWJ2 1684 aa28.85■■■□□ 2.21
SPSB3-204ENST00000563741 NCOA1Q15788 1441 aa28.85■■■□□ 2.21
SPSB3-204ENST00000563741 TSPY4P0CV99 314 aa28.84■■■□□ 2.21
SPSB3-204ENST00000563741 TSPY10P0CW01 314 aa28.84■■■□□ 2.21
SPSB3-204ENST00000563741 MAST1Q9Y2H9 1570 aa28.84■■■□□ 2.21
SPSB3-204ENST00000563741 ATP7AQ04656 1500 aa28.83■■■□□ 2.21
SPSB3-204ENST00000563741 INO80Q9ULG1 1556 aaPredicted RBP28.83■■■□□ 2.21
SPSB3-204ENST00000563741 MADDQ8WXG6 1647 aa28.82■■■□□ 2.2
SPSB3-204ENST00000563741 ANKRD30AQ9BXX3 1397 aa28.81■■■□□ 2.2
SPSB3-204ENST00000563741 MLECQ14165 292 aa28.8■■■□□ 2.2
SPSB3-204ENST00000563741 AGLP35573 1532 aa28.77■■■□□ 2.2
SPSB3-204ENST00000563741 PTPRMP28827 1452 aa28.77■■■□□ 2.2
SPSB3-204ENST00000563741 RIMS1Q86UR5 1692 aaKnown RBP28.76■■■□□ 2.19
SPSB3-204ENST00000563741 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
SPSB3-204ENST00000563741 HRCP23327 699 aa28.75■■■□□ 2.19
SPSB3-204ENST00000563741 FER1L4A9Z1Z3 1794 aa28.74■■■□□ 2.19
SPSB3-204ENST00000563741 PLXNC1O60486 1568 aa28.73■■■□□ 2.19
SPSB3-204ENST00000563741 KIF15Q9NS87 1388 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms