RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.04
UBFD1-202ENST00000563366 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
UBFD1-202ENST00000563366 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
UBFD1-202ENST00000563366 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
UBFD1-202ENST00000563366 ABCA8O94911 1581 aa14.74□□□□□ -0.05
UBFD1-202ENST00000563366 NUP153P49790 1475 aaKnown RBP14.73□□□□□ -0.05
UBFD1-202ENST00000563366 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
UBFD1-202ENST00000563366 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
UBFD1-202ENST00000563366 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
UBFD1-202ENST00000563366 PTPRGP23470 1445 aa14.69□□□□□ -0.06
UBFD1-202ENST00000563366 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
UBFD1-202ENST00000563366 PLB1Q6P1J6 1458 aa14.69□□□□□ -0.06
UBFD1-202ENST00000563366 CCNB3Q8WWL7 1395 aa14.68□□□□□ -0.06
UBFD1-202ENST00000563366 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
UBFD1-202ENST00000563366 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
UBFD1-202ENST00000563366 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
UBFD1-202ENST00000563366 MAGI3Q5TCQ9 1506 aa14.66□□□□□ -0.06
UBFD1-202ENST00000563366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
UBFD1-202ENST00000563366 PHLDB1Q86UU1 1377 aa14.64□□□□□ -0.07
UBFD1-202ENST00000563366 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
UBFD1-202ENST00000563366 ABCC2Q92887 1545 aa14.64□□□□□ -0.07
UBFD1-202ENST00000563366 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
UBFD1-202ENST00000563366 MYOM3Q5VTT5 1437 aa14.63□□□□□ -0.07
UBFD1-202ENST00000563366 UACAQ9BZF9 1416 aa14.63□□□□□ -0.07
UBFD1-202ENST00000563366 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
UBFD1-202ENST00000563366 TROQ12816 1431 aaPredicted RBP14.61□□□□□ -0.07
UBFD1-202ENST00000563366 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
UBFD1-202ENST00000563366 KIF14Q15058 1648 aa14.61□□□□□ -0.07
UBFD1-202ENST00000563366 UHRF1BP1LA0JNW5 1464 aa14.61□□□□□ -0.07
UBFD1-202ENST00000563366 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
UBFD1-202ENST00000563366 MIA2Q96PC5 1412 aa14.58□□□□□ -0.07
UBFD1-202ENST00000563366 ATP10BO94823 1461 aa14.57□□□□□ -0.08
UBFD1-202ENST00000563366 PTPN23Q9H3S7 1636 aa14.57□□□□□ -0.08
UBFD1-202ENST00000563366 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
UBFD1-202ENST00000563366 TCOF1Q13428 1488 aaKnown RBP14.55□□□□□ -0.08
UBFD1-202ENST00000563366 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
UBFD1-202ENST00000563366 HRCP23327 699 aa14.54□□□□□ -0.08
UBFD1-202ENST00000563366 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
UBFD1-202ENST00000563366 MIER1Q8N108 512 aa14.54□□□□□ -0.08
UBFD1-202ENST00000563366 ZCCHC11Q5TAX3 1644 aaKnown RBP14.54□□□□□ -0.08
UBFD1-202ENST00000563366 AKT1S1Q96B36 256 aa14.53□□□□□ -0.08
UBFD1-202ENST00000563366 KDM5BQ9UGL1 1544 aa14.52□□□□□ -0.08
UBFD1-202ENST00000563366 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
UBFD1-202ENST00000563366 CDC42BPAQ5VT25 1732 aa14.5□□□□□ -0.09
UBFD1-202ENST00000563366 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
UBFD1-202ENST00000563366 SPOCK2Q92563 424 aa14.49□□□□□ -0.09
UBFD1-202ENST00000563366 PLEKHG5O94827 1062 aa14.48□□□□□ -0.09
UBFD1-202ENST00000563366 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
UBFD1-202ENST00000563366 MYO5CQ9NQX4 1742 aa14.46□□□□□ -0.09
UBFD1-202ENST00000563366 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
UBFD1-202ENST00000563366 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
UBFD1-202ENST00000563366 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
UBFD1-202ENST00000563366 GPATCH8Q9UKJ3 1502 aaKnown RBP14.45□□□□□ -0.1
UBFD1-202ENST00000563366 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
UBFD1-202ENST00000563366 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
UBFD1-202ENST00000563366 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
UBFD1-202ENST00000563366 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
UBFD1-202ENST00000563366 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
UBFD1-202ENST00000563366 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
UBFD1-202ENST00000563366 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
UBFD1-202ENST00000563366 ITGAEP38570 1179 aa14.41□□□□□ -0.1
UBFD1-202ENST00000563366 CDC42BPBQ9Y5S2 1711 aa14.41□□□□□ -0.1
UBFD1-202ENST00000563366 TTC37Q6PGP7 1564 aa14.4□□□□□ -0.1
UBFD1-202ENST00000563366 CFDP1Q9UEE9 299 aaPredicted RBP14.4□□□□□ -0.1
UBFD1-202ENST00000563366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.1
UBFD1-202ENST00000563366 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
UBFD1-202ENST00000563366 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
UBFD1-202ENST00000563366 WDR7Q9Y4E6 1490 aa14.39□□□□□ -0.11
UBFD1-202ENST00000563366 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
UBFD1-202ENST00000563366 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
UBFD1-202ENST00000563366 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
UBFD1-202ENST00000563366 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
UBFD1-202ENST00000563366 DAPK1P53355 1430 aa14.38□□□□□ -0.11
UBFD1-202ENST00000563366 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
UBFD1-202ENST00000563366 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
UBFD1-202ENST00000563366 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 NPM1P06748 294 aaKnown RBP eCLIP14.36□□□□□ -0.11
UBFD1-202ENST00000563366 PKD2Q13563 968 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 ABCA9Q8IUA7 1624 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 PLEKHH2Q8IVE3 1493 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 SHANK2Q9UPX8 1470 aa14.36□□□□□ -0.11
UBFD1-202ENST00000563366 ROCK1Q13464 1354 aa14.35□□□□□ -0.11
UBFD1-202ENST00000563366 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
UBFD1-202ENST00000563366 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
UBFD1-202ENST00000563366 SAMD9LQ8IVG5 1584 aa14.34□□□□□ -0.11
UBFD1-202ENST00000563366 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
UBFD1-202ENST00000563366 ABCC5O15440 1437 aa14.32□□□□□ -0.12
UBFD1-202ENST00000563366 NAIPQ13075 1403 aa14.32□□□□□ -0.12
UBFD1-202ENST00000563366 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
UBFD1-202ENST00000563366 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
UBFD1-202ENST00000563366 RSPH4AQ5TD94 716 aa14.31□□□□□ -0.12
UBFD1-202ENST00000563366 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
UBFD1-202ENST00000563366 PLCH2O75038 1416 aa14.31□□□□□ -0.12
UBFD1-202ENST00000563366 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
UBFD1-202ENST00000563366 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
UBFD1-202ENST00000563366 MAPKBP1O60336 1514 aa14.3□□□□□ -0.12
UBFD1-202ENST00000563366 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms