RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 GPATCH8Q9UKJ3 1502 aaKnown RBP23.89■■□□□ 1.42
EDC3-206ENST00000563009 NCOA2Q15596 1464 aa23.89■■□□□ 1.42
EDC3-206ENST00000563009 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
EDC3-206ENST00000563009 ARHGAP5Q13017 1502 aa23.87■■□□□ 1.41
EDC3-206ENST00000563009 CCNB3Q8WWL7 1395 aa23.86■■□□□ 1.41
EDC3-206ENST00000563009 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
EDC3-206ENST00000563009 EFCAB2Q5VUJ9 269 aa23.85■■□□□ 1.41
EDC3-206ENST00000563009 ITSN2Q9NZM3 1697 aa23.83■■□□□ 1.4
EDC3-206ENST00000563009 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
EDC3-206ENST00000563009 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
EDC3-206ENST00000563009 DENND4BO75064 1496 aaPredicted RBP23.75■■□□□ 1.39
EDC3-206ENST00000563009 FRMPD1Q5SYB0 1578 aa23.75■■□□□ 1.39
EDC3-206ENST00000563009 SAMD9LQ8IVG5 1584 aa23.75■■□□□ 1.39
EDC3-206ENST00000563009 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
EDC3-206ENST00000563009 ABCC1P33527 1531 aa23.74■■□□□ 1.39
EDC3-206ENST00000563009 RICTORQ6R327 1708 aa23.74■■□□□ 1.39
EDC3-206ENST00000563009 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
EDC3-206ENST00000563009 POGZQ7Z3K3 1410 aa23.71■■□□□ 1.39
EDC3-206ENST00000563009 RAPGEF3O95398 923 aa23.71■■□□□ 1.39
EDC3-206ENST00000563009 PLEKHH2Q8IVE3 1493 aa23.7■■□□□ 1.38
EDC3-206ENST00000563009 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
EDC3-206ENST00000563009 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
EDC3-206ENST00000563009 KIAA1107Q9UPP5 1409 aa23.69■■□□□ 1.38
EDC3-206ENST00000563009 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
EDC3-206ENST00000563009 ZMYM4Q5VZL5 1548 aa23.67■■□□□ 1.38
EDC3-206ENST00000563009 ZNF518AQ6AHZ1 1483 aa23.67■■□□□ 1.38
EDC3-206ENST00000563009 SYCP2Q9BX26 1530 aa23.66■■□□□ 1.38
EDC3-206ENST00000563009 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
EDC3-206ENST00000563009 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
EDC3-206ENST00000563009 KDM5CP41229 1560 aa23.65■■□□□ 1.38
EDC3-206ENST00000563009 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.37
EDC3-206ENST00000563009 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
EDC3-206ENST00000563009 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
EDC3-206ENST00000563009 AFAP1Q8N556 730 aa23.61■■□□□ 1.37
EDC3-206ENST00000563009 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
EDC3-206ENST00000563009 HNRNPMP52272 730 aaKnown RBP eCLIP23.6■■□□□ 1.37
EDC3-206ENST00000563009 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
EDC3-206ENST00000563009 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.36
EDC3-206ENST00000563009 TCOF1Q13428 1488 aaKnown RBP23.57■■□□□ 1.36
EDC3-206ENST00000563009 ARHGEF5Q12774 1597 aa23.57■■□□□ 1.36
EDC3-206ENST00000563009 HECW2Q9P2P5 1572 aa23.57■■□□□ 1.36
EDC3-206ENST00000563009 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
EDC3-206ENST00000563009 ARHGEF40Q8TER5 1519 aa23.55■■□□□ 1.36
EDC3-206ENST00000563009 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
EDC3-206ENST00000563009 RSPH4AQ5TD94 716 aa23.54■■□□□ 1.36
EDC3-206ENST00000563009 CCDC141Q6ZP82 1450 aa23.53■■□□□ 1.36
EDC3-206ENST00000563009 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
EDC3-206ENST00000563009 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
EDC3-206ENST00000563009 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
EDC3-206ENST00000563009 SPAG9O60271 1321 aaKnown RBP23.49■■□□□ 1.35
EDC3-206ENST00000563009 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
EDC3-206ENST00000563009 RTEL1-TNFRSF6BF6WH68 1400 aa23.46■■□□□ 1.35
EDC3-206ENST00000563009 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
EDC3-206ENST00000563009 DIP2CQ9Y2E4 1556 aa23.46■■□□□ 1.35
EDC3-206ENST00000563009 ATP10AO60312 1499 aa23.45■■□□□ 1.34
EDC3-206ENST00000563009 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
EDC3-206ENST00000563009 MAST1Q9Y2H9 1570 aa23.44■■□□□ 1.34
EDC3-206ENST00000563009 ABCC5O15440 1437 aa23.43■■□□□ 1.34
EDC3-206ENST00000563009 REREQ9P2R6 1566 aa23.43■■□□□ 1.34
EDC3-206ENST00000563009 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
EDC3-206ENST00000563009 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.342e-11■□□□□ 9.6
EDC3-206ENST00000563009 CROCC2H7BZ55 1655 aa23.42■■□□□ 1.34
EDC3-206ENST00000563009 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
EDC3-206ENST00000563009 DAPK1P53355 1430 aa23.42■■□□□ 1.34
EDC3-206ENST00000563009 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
EDC3-206ENST00000563009 SHANK2Q9UPX8 1470 aa23.41■■□□□ 1.34
EDC3-206ENST00000563009 TSPY4P0CV99 314 aa23.4■■□□□ 1.34
EDC3-206ENST00000563009 TSPY10P0CW01 314 aa23.4■■□□□ 1.34
EDC3-206ENST00000563009 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
EDC3-206ENST00000563009 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.34
EDC3-206ENST00000563009 ADGBQ8N7X0 1667 aa23.36■■□□□ 1.33
EDC3-206ENST00000563009 PLXNC1O60486 1568 aa23.34■■□□□ 1.33
EDC3-206ENST00000563009 AGLP35573 1532 aa23.33■■□□□ 1.33
EDC3-206ENST00000563009 A2MP01023 1474 aa23.33■■□□□ 1.33
EDC3-206ENST00000563009 BCORL1Q5H9F3 1711 aa23.3■■□□□ 1.32
EDC3-206ENST00000563009 PTPRKQ15262 1439 aa23.29■■□□□ 1.32
EDC3-206ENST00000563009 ADGRL2O95490 1459 aa23.29■■□□□ 1.32
EDC3-206ENST00000563009 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
EDC3-206ENST00000563009 DHX29Q7Z478 1369 aaKnown RBP23.28■■□□□ 1.32
EDC3-206ENST00000563009 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
EDC3-206ENST00000563009 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
EDC3-206ENST00000563009 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
EDC3-206ENST00000563009 ANKRD30AQ9BXX3 1397 aa23.25■■□□□ 1.31
EDC3-206ENST00000563009 KIF15Q9NS87 1388 aa23.24■■□□□ 1.31
EDC3-206ENST00000563009 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
EDC3-206ENST00000563009 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
EDC3-206ENST00000563009 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
EDC3-206ENST00000563009 RRP7BPQ9NSQ0 103 aa23.2■■□□□ 1.3
EDC3-206ENST00000563009 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
EDC3-206ENST00000563009 ERBINQ96RT1 1412 aa23.18■■□□□ 1.3
EDC3-206ENST00000563009 ITGAEP38570 1179 aa23.18■■□□□ 1.3
EDC3-206ENST00000563009 MLECQ14165 292 aa23.17■■□□□ 1.3
EDC3-206ENST00000563009 MADDQ8WXG6 1647 aa23.17■■□□□ 1.3
EDC3-206ENST00000563009 FER1L4A9Z1Z3 1794 aa23.14■■□□□ 1.3
EDC3-206ENST00000563009 KIF3BO15066 747 aa23.14■■□□□ 1.29
EDC3-206ENST00000563009 RNF17Q9BXT8 1623 aaKnown RBP23.14■■□□□ 1.29
EDC3-206ENST00000563009 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
EDC3-206ENST00000563009 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
EDC3-206ENST00000563009 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
EDC3-206ENST00000563009 GGT6Q6P531 493 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms