RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
CLUHP3-206ENST00000562354 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
CLUHP3-206ENST00000562354 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
CLUHP3-206ENST00000562354 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
CLUHP3-206ENST00000562354 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
CLUHP3-206ENST00000562354 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
CLUHP3-206ENST00000562354 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
CLUHP3-206ENST00000562354 ZNF644Q9H582 1327 aaPredicted RBP12.32□□□□□ -0.44
CLUHP3-206ENST00000562354 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
CLUHP3-206ENST00000562354 NUP160Q12769 1436 aa12.31□□□□□ -0.44
CLUHP3-206ENST00000562354 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLUHP3-206ENST00000562354 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
CLUHP3-206ENST00000562354 DISP1Q96F81 1524 aa12.3□□□□□ -0.44
CLUHP3-206ENST00000562354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.441e-9■□□□□ 10
CLUHP3-206ENST00000562354 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
CLUHP3-206ENST00000562354 MPHOSPH9Q99550 1183 aa12.3□□□□□ -0.44
CLUHP3-206ENST00000562354 HFM1A2PYH4 1435 aa12.29□□□□□ -0.44
CLUHP3-206ENST00000562354 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
CLUHP3-206ENST00000562354 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
CLUHP3-206ENST00000562354 UACAQ9BZF9 1416 aa12.28□□□□□ -0.44
CLUHP3-206ENST00000562354 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.44
CLUHP3-206ENST00000562354 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.44
CLUHP3-206ENST00000562354 MRS2Q9HD23 443 aa12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 HIRIP3Q9BW71 556 aaPredicted RBP12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
CLUHP3-206ENST00000562354 FOXD1Q16676 465 aa12.25□□□□□ -0.45
CLUHP3-206ENST00000562354 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
CLUHP3-206ENST00000562354 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
CLUHP3-206ENST00000562354 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CLUHP3-206ENST00000562354 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
CLUHP3-206ENST00000562354 NAIPQ13075 1403 aa12.24□□□□□ -0.45
CLUHP3-206ENST00000562354 FAM9BQ8IZU0 186 aa12.23□□□□□ -0.45
CLUHP3-206ENST00000562354 DAPK1P53355 1430 aa12.22□□□□□ -0.45
CLUHP3-206ENST00000562354 PKD2Q13563 968 aa12.21□□□□□ -0.45
CLUHP3-206ENST00000562354 NUP155O75694 1391 aa12.21□□□□□ -0.46
CLUHP3-206ENST00000562354 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
CLUHP3-206ENST00000562354 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
CLUHP3-206ENST00000562354 ATP10BO94823 1461 aa12.18□□□□□ -0.46
CLUHP3-206ENST00000562354 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
CLUHP3-206ENST00000562354 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
CLUHP3-206ENST00000562354 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
CLUHP3-206ENST00000562354 ABCC5O15440 1437 aa12.17□□□□□ -0.46
CLUHP3-206ENST00000562354 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
CLUHP3-206ENST00000562354 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
CLUHP3-206ENST00000562354 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
CLUHP3-206ENST00000562354 KIF14Q15058 1648 aa12.16□□□□□ -0.46
CLUHP3-206ENST00000562354 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
CLUHP3-206ENST00000562354 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 ANKRD50Q9ULJ7 1429 aa12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 NOP58Q9Y2X3 529 aaKnown RBP12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 KIF15Q9NS87 1388 aa12.15□□□□□ -0.46
CLUHP3-206ENST00000562354 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.47
CLUHP3-206ENST00000562354 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
CLUHP3-206ENST00000562354 AKNAQ7Z591 1439 aa12.14□□□□□ -0.47
CLUHP3-206ENST00000562354 C9orf84Q5VXU9 1444 aa12.14□□□□□ -0.47
CLUHP3-206ENST00000562354 SPAG9O60271 1321 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-206ENST00000562354 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
CLUHP3-206ENST00000562354 RGL3Q3MIN7 710 aa12.12□□□□□ -0.47
CLUHP3-206ENST00000562354 MAPKBP1O60336 1514 aa12.11□□□□□ -0.47
CLUHP3-206ENST00000562354 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
CLUHP3-206ENST00000562354 NBR1Q14596 966 aa12.1□□□□□ -0.47
CLUHP3-206ENST00000562354 HSPA5P11021 654 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-206ENST00000562354 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
CLUHP3-206ENST00000562354 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
CLUHP3-206ENST00000562354 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
CLUHP3-206ENST00000562354 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
CLUHP3-206ENST00000562354 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
CLUHP3-206ENST00000562354 DCAF11Q8TEB1 546 aa12.08□□□□□ -0.48
CLUHP3-206ENST00000562354 ABCA8O94911 1581 aa12.08□□□□□ -0.48
CLUHP3-206ENST00000562354 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
CLUHP3-206ENST00000562354 KANK1Q14678 1352 aa12.07□□□□□ -0.48
CLUHP3-206ENST00000562354 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
CLUHP3-206ENST00000562354 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
CLUHP3-206ENST00000562354 CCDC141Q6ZP82 1450 aa12.07□□□□□ -0.48
CLUHP3-206ENST00000562354 CHD1O14646 1710 aa12.06□□□□□ -0.48
CLUHP3-206ENST00000562354 ABCC2Q92887 1545 aa12.05□□□□□ -0.48
CLUHP3-206ENST00000562354 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
CLUHP3-206ENST00000562354 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
CLUHP3-206ENST00000562354 KIF3BO15066 747 aa12.04□□□□□ -0.48
CLUHP3-206ENST00000562354 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
CLUHP3-206ENST00000562354 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
CLUHP3-206ENST00000562354 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
CLUHP3-206ENST00000562354 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
CLUHP3-206ENST00000562354 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
CLUHP3-206ENST00000562354 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
CLUHP3-206ENST00000562354 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
CLUHP3-206ENST00000562354 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
CLUHP3-206ENST00000562354 ABCC10Q5T3U5 1492 aa11.99□□□□□ -0.49
CLUHP3-206ENST00000562354 GGT6Q6P531 493 aa11.98□□□□□ -0.49
CLUHP3-206ENST00000562354 UPF2Q9HAU5 1272 aaKnown RBP11.98□□□□□ -0.49
CLUHP3-206ENST00000562354 PLCH2O75038 1416 aa11.98□□□□□ -0.49
CLUHP3-206ENST00000562354 SHANK2Q9UPX8 1470 aa11.97□□□□□ -0.49
CLUHP3-206ENST00000562354 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
CLUHP3-206ENST00000562354 CANXP27824 592 aaKnown RBP11.97□□□□□ -0.49
CLUHP3-206ENST00000562354 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms