RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 FANCAO15360 1455 aa24.28■■□□□ 1.48
SPG7-204ENST00000561911 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
SPG7-204ENST00000561911 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
SPG7-204ENST00000561911 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
SPG7-204ENST00000561911 NEO1Q92859 1461 aa24.26■■□□□ 1.47
SPG7-204ENST00000561911 ITSN2Q9NZM3 1697 aa24.24■■□□□ 1.47
SPG7-204ENST00000561911 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
SPG7-204ENST00000561911 MIA2Q96PC5 1412 aa24.22■■□□□ 1.47
SPG7-204ENST00000561911 AKNAQ7Z591 1439 aa24.21■■□□□ 1.47
SPG7-204ENST00000561911 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
SPG7-204ENST00000561911 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.47
SPG7-204ENST00000561911 FGD6Q6ZV73 1430 aa24.2■■□□□ 1.46
SPG7-204ENST00000561911 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
SPG7-204ENST00000561911 ZNF644Q9H582 1327 aaPredicted RBP24.16■■□□□ 1.46
SPG7-204ENST00000561911 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
SPG7-204ENST00000561911 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.46
SPG7-204ENST00000561911 PLEKHH2Q8IVE3 1493 aa24.14■■□□□ 1.46
SPG7-204ENST00000561911 SCAPERQ9BY12 1400 aa24.13■■□□□ 1.45
SPG7-204ENST00000561911 ABCC1P33527 1531 aa24.13■■□□□ 1.45
SPG7-204ENST00000561911 KIAA1107Q9UPP5 1409 aa24.12■■□□□ 1.45
SPG7-204ENST00000561911 TCOF1Q13428 1488 aaKnown RBP24.11■■□□□ 1.45
SPG7-204ENST00000561911 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
SPG7-204ENST00000561911 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
SPG7-204ENST00000561911 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
SPG7-204ENST00000561911 DENND4BO75064 1496 aaPredicted RBP24.09■■□□□ 1.45
SPG7-204ENST00000561911 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
SPG7-204ENST00000561911 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.44
SPG7-204ENST00000561911 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.44
SPG7-204ENST00000561911 POGZQ7Z3K3 1410 aa24.07■■□□□ 1.44
SPG7-204ENST00000561911 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
SPG7-204ENST00000561911 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
SPG7-204ENST00000561911 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
SPG7-204ENST00000561911 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
SPG7-204ENST00000561911 KDM6BO15054 1643 aa24.05■■□□□ 1.44
SPG7-204ENST00000561911 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
SPG7-204ENST00000561911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.44
SPG7-204ENST00000561911 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
SPG7-204ENST00000561911 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
SPG7-204ENST00000561911 ARHGEF5Q12774 1597 aa24■■□□□ 1.43
SPG7-204ENST00000561911 RSPH4AQ5TD94 716 aa24■■□□□ 1.43
SPG7-204ENST00000561911 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
SPG7-204ENST00000561911 RICTORQ6R327 1708 aa23.96■■□□□ 1.43
SPG7-204ENST00000561911 KDM5CP41229 1560 aa23.96■■□□□ 1.43
SPG7-204ENST00000561911 ABCC5O15440 1437 aa23.96■■□□□ 1.43
SPG7-204ENST00000561911 DAPK1P53355 1430 aa23.95■■□□□ 1.42
SPG7-204ENST00000561911 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
SPG7-204ENST00000561911 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
SPG7-204ENST00000561911 DNMT1P26358 1616 aaKnown RBP23.93■■□□□ 1.42
SPG7-204ENST00000561911 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
SPG7-204ENST00000561911 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
SPG7-204ENST00000561911 MLH3Q9UHC1 1453 aa23.91■■□□□ 1.42
SPG7-204ENST00000561911 MAGI2Q86UL8 1455 aa23.9■■□□□ 1.42
SPG7-204ENST00000561911 SHANK2Q9UPX8 1470 aa23.9■■□□□ 1.42
SPG7-204ENST00000561911 C9orf84Q5VXU9 1444 aa23.9■■□□□ 1.42
SPG7-204ENST00000561911 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
SPG7-204ENST00000561911 ITGAEP38570 1179 aa23.88■■□□□ 1.41
SPG7-204ENST00000561911 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
SPG7-204ENST00000561911 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
SPG7-204ENST00000561911 ZFYVE16Q7Z3T8 1539 aa23.87■■□□□ 1.41
SPG7-204ENST00000561911 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
SPG7-204ENST00000561911 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
SPG7-204ENST00000561911 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
SPG7-204ENST00000561911 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
SPG7-204ENST00000561911 YEATS2Q9ULM3 1422 aa23.85■■□□□ 1.41
SPG7-204ENST00000561911 CROCC2H7BZ55 1655 aa23.84■■□□□ 1.41
SPG7-204ENST00000561911 CHIC2Q9UKJ5 165 aa23.84■■□□□ 1.41
SPG7-204ENST00000561911 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
SPG7-204ENST00000561911 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
SPG7-204ENST00000561911 ANKRD30AQ9BXX3 1397 aa23.79■■□□□ 1.4
SPG7-204ENST00000561911 ADGRL2O95490 1459 aa23.79■■□□□ 1.4
SPG7-204ENST00000561911 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
SPG7-204ENST00000561911 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
SPG7-204ENST00000561911 ROCK1Q13464 1354 aa23.77■■□□□ 1.4
SPG7-204ENST00000561911 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
SPG7-204ENST00000561911 ATP10AO60312 1499 aa23.76■■□□□ 1.39
SPG7-204ENST00000561911 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
SPG7-204ENST00000561911 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
SPG7-204ENST00000561911 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
SPG7-204ENST00000561911 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
SPG7-204ENST00000561911 A2MP01023 1474 aa23.72■■□□□ 1.39
SPG7-204ENST00000561911 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
SPG7-204ENST00000561911 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
SPG7-204ENST00000561911 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
SPG7-204ENST00000561911 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
SPG7-204ENST00000561911 HFM1A2PYH4 1435 aa23.65■■□□□ 1.38
SPG7-204ENST00000561911 NAIPQ13075 1403 aa23.64■■□□□ 1.37
SPG7-204ENST00000561911 ERBINQ96RT1 1412 aa23.64■■□□□ 1.37
SPG7-204ENST00000561911 AGLP35573 1532 aa23.64■■□□□ 1.37
SPG7-204ENST00000561911 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
SPG7-204ENST00000561911 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
SPG7-204ENST00000561911 SIGLEC1Q9BZZ2 1709 aa23.59■■□□□ 1.37
SPG7-204ENST00000561911 KIF3BO15066 747 aa23.58■■□□□ 1.37
SPG7-204ENST00000561911 GCC2Q8IWJ2 1684 aa23.56■■□□□ 1.36
SPG7-204ENST00000561911 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
SPG7-204ENST00000561911 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
SPG7-204ENST00000561911 MLECQ14165 292 aa23.52■■□□□ 1.36
SPG7-204ENST00000561911 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
SPG7-204ENST00000561911 GGT6Q6P531 493 aa23.51■■□□□ 1.35
SPG7-204ENST00000561911 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
SPG7-204ENST00000561911 RNF17Q9BXT8 1623 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms