RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
AC010542.3-202ENST00000561728 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
AC010542.3-202ENST00000561728 ABCA8O94911 1581 aa17.28■□□□□ 0.36
AC010542.3-202ENST00000561728 SRCAPQ6ZRS2 3230 aa17.27■□□□□ 0.36
AC010542.3-202ENST00000561728 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
AC010542.3-202ENST00000561728 MAGI2Q86UL8 1455 aa17.24■□□□□ 0.35
AC010542.3-202ENST00000561728 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
AC010542.3-202ENST00000561728 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
AC010542.3-202ENST00000561728 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.35
AC010542.3-202ENST00000561728 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
AC010542.3-202ENST00000561728 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
AC010542.3-202ENST00000561728 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
AC010542.3-202ENST00000561728 ATP10AO60312 1499 aa17.16■□□□□ 0.34
AC010542.3-202ENST00000561728 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
AC010542.3-202ENST00000561728 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
AC010542.3-202ENST00000561728 ATP10BO94823 1461 aa17.15■□□□□ 0.34
AC010542.3-202ENST00000561728 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
AC010542.3-202ENST00000561728 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
AC010542.3-202ENST00000561728 C3P01024 1663 aa17.14■□□□□ 0.33
AC010542.3-202ENST00000561728 PKD2Q13563 968 aa17.14■□□□□ 0.33
AC010542.3-202ENST00000561728 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
AC010542.3-202ENST00000561728 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
AC010542.3-202ENST00000561728 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
AC010542.3-202ENST00000561728 FAM9AQ8IZU1 332 aaPredicted RBP17.12■□□□□ 0.33
AC010542.3-202ENST00000561728 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■■□ 20.7
AC010542.3-202ENST00000561728 CPS1P31327 1500 aa17.1■□□□□ 0.33
AC010542.3-202ENST00000561728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
AC010542.3-202ENST00000561728 HNRNPUL2Q1KMD3 747 aaKnown RBP17.08■□□□□ 0.32
AC010542.3-202ENST00000561728 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
AC010542.3-202ENST00000561728 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
AC010542.3-202ENST00000561728 ALKQ9UM73 1620 aa17■□□□□ 0.31
AC010542.3-202ENST00000561728 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
AC010542.3-202ENST00000561728 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
AC010542.3-202ENST00000561728 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
AC010542.3-202ENST00000561728 NPATQ14207 1427 aa16.98■□□□□ 0.31
AC010542.3-202ENST00000561728 SUPT6HQ7KZ85 1726 aaKnown RBP16.97■□□□□ 0.31
AC010542.3-202ENST00000561728 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.31
AC010542.3-202ENST00000561728 FOXD1Q16676 465 aa16.94■□□□□ 0.3
AC010542.3-202ENST00000561728 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
AC010542.3-202ENST00000561728 ZNF142P52746 1687 aaPredicted RBP16.91■□□□□ 0.3
AC010542.3-202ENST00000561728 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
AC010542.3-202ENST00000561728 AGLP35573 1532 aa16.91■□□□□ 0.3
AC010542.3-202ENST00000561728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
AC010542.3-202ENST00000561728 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
AC010542.3-202ENST00000561728 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
AC010542.3-202ENST00000561728 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
AC010542.3-202ENST00000561728 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
AC010542.3-202ENST00000561728 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
AC010542.3-202ENST00000561728 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
AC010542.3-202ENST00000561728 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
AC010542.3-202ENST00000561728 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
AC010542.3-202ENST00000561728 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
AC010542.3-202ENST00000561728 DIP2CQ9Y2E4 1556 aa16.84■□□□□ 0.29
AC010542.3-202ENST00000561728 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
AC010542.3-202ENST00000561728 MROH2AA6NES4 1674 aa16.81■□□□□ 0.28
AC010542.3-202ENST00000561728 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
AC010542.3-202ENST00000561728 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
AC010542.3-202ENST00000561728 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
AC010542.3-202ENST00000561728 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
AC010542.3-202ENST00000561728 PLCH2O75038 1416 aa16.79■□□□□ 0.28
AC010542.3-202ENST00000561728 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
AC010542.3-202ENST00000561728 NUP153P49790 1475 aaKnown RBP16.77■□□□□ 0.28
AC010542.3-202ENST00000561728 KDM5CP41229 1560 aa16.77■□□□□ 0.27
AC010542.3-202ENST00000561728 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
AC010542.3-202ENST00000561728 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
AC010542.3-202ENST00000561728 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
AC010542.3-202ENST00000561728 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
AC010542.3-202ENST00000561728 ZNF772Q68DY9 489 aaPredicted RBP16.73■□□□□ 0.27
AC010542.3-202ENST00000561728 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
AC010542.3-202ENST00000561728 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
AC010542.3-202ENST00000561728 SYNMO15061 1565 aa16.72■□□□□ 0.27
AC010542.3-202ENST00000561728 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
AC010542.3-202ENST00000561728 ANKLE2Q86XL3 938 aa16.7■□□□□ 0.26
AC010542.3-202ENST00000561728 RXRBP28702 533 aa16.69■□□□□ 0.26
AC010542.3-202ENST00000561728 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
AC010542.3-202ENST00000561728 MLH3Q9UHC1 1453 aa16.68■□□□□ 0.26
AC010542.3-202ENST00000561728 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
AC010542.3-202ENST00000561728 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
AC010542.3-202ENST00000561728 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
AC010542.3-202ENST00000561728 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
AC010542.3-202ENST00000561728 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
AC010542.3-202ENST00000561728 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
AC010542.3-202ENST00000561728 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
AC010542.3-202ENST00000561728 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
AC010542.3-202ENST00000561728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.62■□□□□ 0.25
AC010542.3-202ENST00000561728 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
AC010542.3-202ENST00000561728 JCADQ9P266 1359 aa16.61■□□□□ 0.25
AC010542.3-202ENST00000561728 MED14O60244 1454 aa16.6■□□□□ 0.25
AC010542.3-202ENST00000561728 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
AC010542.3-202ENST00000561728 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
AC010542.3-202ENST00000561728 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
AC010542.3-202ENST00000561728 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 ROBO1Q9Y6N7 1651 aa16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
AC010542.3-202ENST00000561728 ABCC1P33527 1531 aa16.55■□□□□ 0.24
AC010542.3-202ENST00000561728 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
AC010542.3-202ENST00000561728 ITSN2Q9NZM3 1697 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms