RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
COTL1-202ENST00000561707 FAM69CQ0P6D2 419 aa19.47■□□□□ 0.71
COTL1-202ENST00000561707 PLCH2O75038 1416 aa19.47■□□□□ 0.71
COTL1-202ENST00000561707 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
COTL1-202ENST00000561707 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
COTL1-202ENST00000561707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.7
COTL1-202ENST00000561707 EFCAB2Q5VUJ9 269 aa19.44■□□□□ 0.7
COTL1-202ENST00000561707 ARHGAP5Q13017 1502 aa19.44■□□□□ 0.7
COTL1-202ENST00000561707 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
COTL1-202ENST00000561707 HNRNPMP52272 730 aaKnown RBP eCLIP19.43■□□□□ 0.7
COTL1-202ENST00000561707 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
COTL1-202ENST00000561707 GLI2P10070 1586 aa19.41■□□□□ 0.7
COTL1-202ENST00000561707 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
COTL1-202ENST00000561707 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
COTL1-202ENST00000561707 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
COTL1-202ENST00000561707 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
COTL1-202ENST00000561707 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
COTL1-202ENST00000561707 CHIC2Q9UKJ5 165 aa19.37■□□□□ 0.69
COTL1-202ENST00000561707 MAP3K4Q9Y6R4 1608 aa19.36■□□□□ 0.69
COTL1-202ENST00000561707 ARAP3Q8WWN8 1544 aa19.35■□□□□ 0.69
COTL1-202ENST00000561707 ABCC5O15440 1437 aa19.35■□□□□ 0.69
COTL1-202ENST00000561707 FANCAO15360 1455 aa19.35■□□□□ 0.69
COTL1-202ENST00000561707 ARHGEF12Q9NZN5 1544 aa19.34■□□□□ 0.69
COTL1-202ENST00000561707 MBD5Q9P267 1494 aa19.33■□□□□ 0.68
COTL1-202ENST00000561707 DAPK1P53355 1430 aa19.33■□□□□ 0.68
COTL1-202ENST00000561707 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
COTL1-202ENST00000561707 DNMT1P26358 1616 aaKnown RBP19.32■□□□□ 0.68
COTL1-202ENST00000561707 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
COTL1-202ENST00000561707 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
COTL1-202ENST00000561707 KIAA1107Q9UPP5 1409 aa19.3■□□□□ 0.68
COTL1-202ENST00000561707 PLEKHH2Q8IVE3 1493 aa19.29■□□□□ 0.68
COTL1-202ENST00000561707 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
COTL1-202ENST00000561707 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
COTL1-202ENST00000561707 TRAPPC8Q9Y2L5 1435 aa19.28■□□□□ 0.68
COTL1-202ENST00000561707 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
COTL1-202ENST00000561707 RSPH4AQ5TD94 716 aa19.28■□□□□ 0.68
COTL1-202ENST00000561707 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
COTL1-202ENST00000561707 ABCC1P33527 1531 aa19.28■□□□□ 0.68
COTL1-202ENST00000561707 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
COTL1-202ENST00000561707 TSPY4P0CV99 314 aa19.27■□□□□ 0.68
COTL1-202ENST00000561707 TSPY10P0CW01 314 aa19.27■□□□□ 0.68
COTL1-202ENST00000561707 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
COTL1-202ENST00000561707 NEO1Q92859 1461 aa19.24■□□□□ 0.67
COTL1-202ENST00000561707 CROCC2H7BZ55 1655 aa19.24■□□□□ 0.67
COTL1-202ENST00000561707 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
COTL1-202ENST00000561707 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
COTL1-202ENST00000561707 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
COTL1-202ENST00000561707 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
COTL1-202ENST00000561707 RAPGEF3O95398 923 aa19.2■□□□□ 0.66
COTL1-202ENST00000561707 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
COTL1-202ENST00000561707 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
COTL1-202ENST00000561707 NAIPQ13075 1403 aa19.18■□□□□ 0.66
COTL1-202ENST00000561707 NCOA1Q15788 1441 aa19.18■□□□□ 0.66
COTL1-202ENST00000561707 TEX14Q8IWB6 1497 aa19.18■□□□□ 0.66
COTL1-202ENST00000561707 ADGBQ8N7X0 1667 aa19.17■□□□□ 0.66
COTL1-202ENST00000561707 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
COTL1-202ENST00000561707 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
COTL1-202ENST00000561707 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
COTL1-202ENST00000561707 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
COTL1-202ENST00000561707 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
COTL1-202ENST00000561707 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
COTL1-202ENST00000561707 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
COTL1-202ENST00000561707 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
COTL1-202ENST00000561707 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
COTL1-202ENST00000561707 KDM6BO15054 1643 aa19.13■□□□□ 0.65
COTL1-202ENST00000561707 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
COTL1-202ENST00000561707 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
COTL1-202ENST00000561707 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
COTL1-202ENST00000561707 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
COTL1-202ENST00000561707 RTEL1-TNFRSF6BF6WH68 1400 aa19.1■□□□□ 0.65
COTL1-202ENST00000561707 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
COTL1-202ENST00000561707 HRCP23327 699 aa19.09■□□□□ 0.65
COTL1-202ENST00000561707 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
COTL1-202ENST00000561707 KDM5CP41229 1560 aa19.07■□□□□ 0.64
COTL1-202ENST00000561707 FRMPD1Q5SYB0 1578 aa19.07■□□□□ 0.64
COTL1-202ENST00000561707 ATP7AQ04656 1500 aa19.07■□□□□ 0.64
COTL1-202ENST00000561707 INO80Q9ULG1 1556 aaPredicted RBP19.06■□□□□ 0.64
COTL1-202ENST00000561707 ZFYVE16Q7Z3T8 1539 aa19.06■□□□□ 0.64
COTL1-202ENST00000561707 MLH3Q9UHC1 1453 aa19.05■□□□□ 0.64
COTL1-202ENST00000561707 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
COTL1-202ENST00000561707 ANKRD50Q9ULJ7 1429 aa19.05■□□□□ 0.64
COTL1-202ENST00000561707 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
COTL1-202ENST00000561707 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.64
COTL1-202ENST00000561707 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
COTL1-202ENST00000561707 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
COTL1-202ENST00000561707 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
COTL1-202ENST00000561707 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
COTL1-202ENST00000561707 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
COTL1-202ENST00000561707 ABCA6Q8N139 1617 aa18.98■□□□□ 0.63
COTL1-202ENST00000561707 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
COTL1-202ENST00000561707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.635e-6■■■□□ 18.6
COTL1-202ENST00000561707 A2MP01023 1474 aa18.96■□□□□ 0.63
COTL1-202ENST00000561707 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
COTL1-202ENST00000561707 KIF3BO15066 747 aa18.95■□□□□ 0.62
COTL1-202ENST00000561707 MAGI2Q86UL8 1455 aa18.94■□□□□ 0.62
COTL1-202ENST00000561707 ERBINQ96RT1 1412 aa18.93■□□□□ 0.62
COTL1-202ENST00000561707 MPHOSPH9Q99550 1183 aa18.93■□□□□ 0.62
COTL1-202ENST00000561707 NUP155O75694 1391 aa18.93■□□□□ 0.62
COTL1-202ENST00000561707 ATP10AO60312 1499 aa18.91■□□□□ 0.62
COTL1-202ENST00000561707 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms