RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 PELP1Q8IZL8 1130 aaKnown RBP9.03□□□□□ -0.96
PCAT29-204ENST00000560655 ZNF608Q9ULD9 1512 aaPredicted RBP9.03□□□□□ -0.96
PCAT29-204ENST00000560655 FMN1Q68DA7 1419 aa9.03□□□□□ -0.96
PCAT29-204ENST00000560655 SNAPC4Q5SXM2 1469 aa9.02□□□□□ -0.96
PCAT29-204ENST00000560655 DHX57Q6P158 1386 aaKnown RBP9.01□□□□□ -0.97
PCAT29-204ENST00000560655 PBRM1Q86U86 1689 aa9.01□□□□□ -0.97
PCAT29-204ENST00000560655 CFAP43Q8NDM7 1665 aa9.01□□□□□ -0.97
PCAT29-204ENST00000560655 ADAMTS12P58397 1594 aa9.01□□□□□ -0.97
PCAT29-204ENST00000560655 CLSPNQ9HAW4 1339 aa9□□□□□ -0.97
PCAT29-204ENST00000560655 POTEJP0CG39 1038 aa8.99□□□□□ -0.97
PCAT29-204ENST00000560655 CDAN1Q8IWY9 1227 aa8.99□□□□□ -0.97
PCAT29-204ENST00000560655 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
PCAT29-204ENST00000560655 THOC2Q8NI27 1593 aaKnown RBP8.98□□□□□ -0.97
PCAT29-204ENST00000560655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
PCAT29-204ENST00000560655 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
PCAT29-204ENST00000560655 ERCC6Q03468 1493 aa8.96□□□□□ -0.97
PCAT29-204ENST00000560655 UGGT2Q9NYU1 1516 aa8.96□□□□□ -0.97
PCAT29-204ENST00000560655 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
PCAT29-204ENST00000560655 IQGAP2Q13576 1575 aa8.95□□□□□ -0.98
PCAT29-204ENST00000560655 ZNF316A6NFI3 1004 aaPredicted RBP8.94□□□□□ -0.98
PCAT29-204ENST00000560655 ITGAEP38570 1179 aa8.94□□□□□ -0.98
PCAT29-204ENST00000560655 SETD5Q9C0A6 1442 aa8.94□□□□□ -0.98
PCAT29-204ENST00000560655 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
PCAT29-204ENST00000560655 ATXN8OSP0DMR3 200 aa8.93□□□□□ -0.98
PCAT29-204ENST00000560655 C7P10643 843 aa8.93□□□□□ -0.98
PCAT29-204ENST00000560655 FAM50AQ14320 339 aaKnown RBP8.93□□□□□ -0.98
PCAT29-204ENST00000560655 SCUBE2Q9NQ36 999 aa8.93□□□□□ -0.98
PCAT29-204ENST00000560655 RAB3GAP2Q9H2M9 1393 aa8.93□□□□□ -0.98
PCAT29-204ENST00000560655 GRIN2AQ12879 1464 aa8.93□□□□□ -0.98
PCAT29-204ENST00000560655 EIF4G3O43432 1585 aaKnown RBP8.93□□□□□ -0.98
PCAT29-204ENST00000560655 DISP1Q96F81 1524 aa8.92□□□□□ -0.98
PCAT29-204ENST00000560655 MAGI1Q96QZ7 1491 aaPredicted RBP8.92□□□□□ -0.98
PCAT29-204ENST00000560655 MTUS2Q5JR59 1369 aa8.92□□□□□ -0.98
PCAT29-204ENST00000560655 PHF12Q96QT6 1004 aa8.92□□□□□ -0.98
PCAT29-204ENST00000560655 ARHGEF11O15085 1522 aa8.91□□□□□ -0.98
PCAT29-204ENST00000560655 MAGI3Q5TCQ9 1506 aa8.91□□□□□ -0.98
PCAT29-204ENST00000560655 FGD6Q6ZV73 1430 aa8.91□□□□□ -0.98
PCAT29-204ENST00000560655 SLC39A7Q92504 469 aa8.91□□□□□ -0.98
PCAT29-204ENST00000560655 NCOA2Q15596 1464 aa8.9□□□□□ -0.98
PCAT29-204ENST00000560655 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
PCAT29-204ENST00000560655 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
PCAT29-204ENST00000560655 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.99
PCAT29-204ENST00000560655 SYNJ2O15056 1496 aa8.89□□□□□ -0.99
PCAT29-204ENST00000560655 CCDC18Q5T9S5 1454 aa8.89□□□□□ -0.99
PCAT29-204ENST00000560655 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
PCAT29-204ENST00000560655 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
PCAT29-204ENST00000560655 EHBP1L1Q8N3D4 1523 aa8.89□□□□□ -0.99
PCAT29-204ENST00000560655 NUP160Q12769 1436 aa8.88□□□□□ -0.99
PCAT29-204ENST00000560655 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
PCAT29-204ENST00000560655 MAPKBP1O60336 1514 aa8.88□□□□□ -0.99
PCAT29-204ENST00000560655 KIAA0556O60303 1618 aa8.87□□□□□ -0.99
PCAT29-204ENST00000560655 HECW1Q76N89 1606 aa8.87□□□□□ -0.99
PCAT29-204ENST00000560655 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
PCAT29-204ENST00000560655 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
PCAT29-204ENST00000560655 SUPT6HQ7KZ85 1726 aaKnown RBP8.85□□□□□ -0.99
PCAT29-204ENST00000560655 TCOF1Q13428 1488 aaKnown RBP8.85□□□□□ -0.99
PCAT29-204ENST00000560655 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
PCAT29-204ENST00000560655 CDK13Q14004 1512 aaKnown RBP8.85□□□□□ -0.99
PCAT29-204ENST00000560655 NUP153P49790 1475 aaKnown RBP8.84□□□□□ -0.99
PCAT29-204ENST00000560655 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
PCAT29-204ENST00000560655 HFM1A2PYH4 1435 aa8.83□□□□□ -1
PCAT29-204ENST00000560655 MIA2Q96PC5 1412 aa8.83□□□□□ -1
PCAT29-204ENST00000560655 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
PCAT29-204ENST00000560655 MMRN1Q13201 1228 aa8.83□□□□□ -1
PCAT29-204ENST00000560655 NAIPQ13075 1403 aa8.82□□□□□ -1
PCAT29-204ENST00000560655 SIN3AQ96ST3 1273 aa8.82□□□□□ -1
PCAT29-204ENST00000560655 PTPN23Q9H3S7 1636 aa8.82□□□□□ -1
PCAT29-204ENST00000560655 ARID3CA6NKF2 412 aa8.81□□□□□ -1
PCAT29-204ENST00000560655 CREBZFQ9NS37 354 aa8.81□□□□□ -1
PCAT29-204ENST00000560655 RAPGEF6Q8TEU7 1601 aa8.8□□□□□ -1
PCAT29-204ENST00000560655 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
PCAT29-204ENST00000560655 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
PCAT29-204ENST00000560655 PLB1Q6P1J6 1458 aa8.79□□□□□ -1
PCAT29-204ENST00000560655 CDK11AQ9UQ88 783 aaPredicted RBP8.78□□□□□ -1
PCAT29-204ENST00000560655 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
PCAT29-204ENST00000560655 UACAQ9BZF9 1416 aa8.78□□□□□ -1
PCAT29-204ENST00000560655 SPNS2Q8IVW8 549 aa8.77□□□□□ -1.01
PCAT29-204ENST00000560655 MIER1Q8N108 512 aa8.77□□□□□ -1.01
PCAT29-204ENST00000560655 TROQ12816 1431 aaPredicted RBP8.77□□□□□ -1.01
PCAT29-204ENST00000560655 AKNAQ7Z591 1439 aa8.77□□□□□ -1.01
PCAT29-204ENST00000560655 PPP1R15AO75807 674 aaPredicted RBP8.76□□□□□ -1.01
PCAT29-204ENST00000560655 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
PCAT29-204ENST00000560655 ABCA8O94911 1581 aa8.76□□□□□ -1.01
PCAT29-204ENST00000560655 ZNF644Q9H582 1327 aaPredicted RBP8.76□□□□□ -1.01
PCAT29-204ENST00000560655 ABCC5O15440 1437 aa8.75□□□□□ -1.01
PCAT29-204ENST00000560655 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
PCAT29-204ENST00000560655 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
PCAT29-204ENST00000560655 CHIC2Q9UKJ5 165 aa8.75□□□□□ -1.01
PCAT29-204ENST00000560655 ATP10BO94823 1461 aa8.75□□□□□ -1.01
PCAT29-204ENST00000560655 DENND4BO75064 1496 aaPredicted RBP8.74□□□□□ -1.01
PCAT29-204ENST00000560655 GPATCH8Q9UKJ3 1502 aaKnown RBP8.74□□□□□ -1.01
PCAT29-204ENST00000560655 ROCK1Q13464 1354 aa8.73□□□□□ -1.01
PCAT29-204ENST00000560655 DAPK1P53355 1430 aa8.73□□□□□ -1.01
PCAT29-204ENST00000560655 ZBTB22O15209 634 aa8.72□□□□□ -1.01
PCAT29-204ENST00000560655 KDM6BO15054 1643 aa8.72□□□□□ -1.01
PCAT29-204ENST00000560655 PTPRGP23470 1445 aa8.71□□□□□ -1.01
PCAT29-204ENST00000560655 PLEKHD1A6NEE1 506 aa8.71□□□□□ -1.02
PCAT29-204ENST00000560655 ADCY10Q96PN6 1610 aa8.71□□□□□ -1.02
PCAT29-204ENST00000560655 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.02
PCAT29-204ENST00000560655 GCC2Q8IWJ2 1684 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms