RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 UHRF1BP1Q6BDS2 1440 aa26.96■■□□□ 1.91
SNX22-204ENST00000560607 P3H3Q8IVL6 736 aa26.94■■□□□ 1.9
SNX22-204ENST00000560607 LTBP4Q8N2S1 1624 aa26.94■■□□□ 1.9
SNX22-204ENST00000560607 ZMYM4Q5VZL5 1548 aa26.93■■□□□ 1.9
SNX22-204ENST00000560607 MAGI2Q86UL8 1455 aa26.92■■□□□ 1.9
SNX22-204ENST00000560607 ARHGEF12Q9NZN5 1544 aa26.9■■□□□ 1.9
SNX22-204ENST00000560607 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
SNX22-204ENST00000560607 UBAP1LF5GYI3 381 aa26.86■■□□□ 1.89
SNX22-204ENST00000560607 CFAP74Q9C0B2 1584 aa26.84■■□□□ 1.89
SNX22-204ENST00000560607 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
SNX22-204ENST00000560607 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
SNX22-204ENST00000560607 ATP10AO60312 1499 aa26.8■■□□□ 1.88
SNX22-204ENST00000560607 PLEKHD1A6NEE1 506 aa26.79■■□□□ 1.88
SNX22-204ENST00000560607 RAPGEF6Q8TEU7 1601 aa26.77■■□□□ 1.88
SNX22-204ENST00000560607 C9orf84Q5VXU9 1444 aa26.76■■□□□ 1.87
SNX22-204ENST00000560607 UBTFP17480 764 aaKnown RBP26.75■■□□□ 1.87
SNX22-204ENST00000560607 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
SNX22-204ENST00000560607 NUP153P49790 1475 aaKnown RBP26.7■■□□□ 1.87
SNX22-204ENST00000560607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.7■■□□□ 1.86
SNX22-204ENST00000560607 MED1Q15648 1581 aaPredicted RBP26.69■■□□□ 1.86
SNX22-204ENST00000560607 NCOA1Q15788 1441 aa26.69■■□□□ 1.86
SNX22-204ENST00000560607 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
SNX22-204ENST00000560607 ZNF335Q9H4Z2 1342 aaPredicted RBP26.65■■□□□ 1.86
SNX22-204ENST00000560607 HSPA1LP34931 641 aa26.63■■□□□ 1.85
SNX22-204ENST00000560607 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
SNX22-204ENST00000560607 TRAPPC8Q9Y2L5 1435 aa26.63■■□□□ 1.85
SNX22-204ENST00000560607 ESF1Q9H501 851 aaKnown RBP26.62■■□□□ 1.85
SNX22-204ENST00000560607 SCAF1Q9H7N4 1312 aaKnown RBP26.6■■□□□ 1.85
SNX22-204ENST00000560607 C3P01024 1663 aa26.58■■□□□ 1.85
SNX22-204ENST00000560607 SAMD9Q5K651 1589 aa26.57■■□□□ 1.84
SNX22-204ENST00000560607 NCKAP5LQ9HCH0 1330 aa26.56■■□□□ 1.84
SNX22-204ENST00000560607 PLCH2O75038 1416 aa26.56■■□□□ 1.84
SNX22-204ENST00000560607 PIP4K2BP78356 416 aa26.54■■□□□ 1.84
SNX22-204ENST00000560607 MYT1LQ9UL68 1186 aa26.54■■□□□ 1.84
SNX22-204ENST00000560607 CAMSAP1Q5T5Y3 1602 aa26.54■■□□□ 1.84
SNX22-204ENST00000560607 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
SNX22-204ENST00000560607 EFCAB2Q5VUJ9 269 aa26.51■■□□□ 1.83
SNX22-204ENST00000560607 AFAP1Q8N556 730 aa26.47■■□□□ 1.83
SNX22-204ENST00000560607 ZNF518AQ6AHZ1 1483 aa26.47■■□□□ 1.83
SNX22-204ENST00000560607 TOM1O60784 492 aa26.46■■□□□ 1.83
SNX22-204ENST00000560607 PKD2Q13563 968 aa26.45■■□□□ 1.82
SNX22-204ENST00000560607 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
SNX22-204ENST00000560607 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
SNX22-204ENST00000560607 CNTLNQ9NXG0 1405 aa26.4■■□□□ 1.82
SNX22-204ENST00000560607 DIP2CQ9Y2E4 1556 aa26.4■■□□□ 1.82
SNX22-204ENST00000560607 CLIP1P30622 1438 aa26.39■■□□□ 1.82
SNX22-204ENST00000560607 AGLP35573 1532 aa26.39■■□□□ 1.82
SNX22-204ENST00000560607 NPATQ14207 1427 aa26.39■■□□□ 1.81
SNX22-204ENST00000560607 KDM5CP41229 1560 aa26.37■■□□□ 1.81
SNX22-204ENST00000560607 PPP6R1Q9UPN7 881 aa26.37■■□□□ 1.81
SNX22-204ENST00000560607 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
SNX22-204ENST00000560607 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
SNX22-204ENST00000560607 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
SNX22-204ENST00000560607 CDK13Q14004 1512 aaKnown RBP26.3■■□□□ 1.8
SNX22-204ENST00000560607 MYO5CQ9NQX4 1742 aa26.3■■□□□ 1.8
SNX22-204ENST00000560607 ZMYM3Q14202 1370 aa26.3■■□□□ 1.8
SNX22-204ENST00000560607 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
SNX22-204ENST00000560607 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
SNX22-204ENST00000560607 ARHGAP5Q13017 1502 aa26.25■■□□□ 1.79
SNX22-204ENST00000560607 CPS1P31327 1500 aa26.23■■□□□ 1.79
SNX22-204ENST00000560607 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
SNX22-204ENST00000560607 RGS17Q9UGC6 210 aaPredicted RBP26.21■■□□□ 1.79
SNX22-204ENST00000560607 MROH2AA6NES4 1674 aa26.21■■□□□ 1.79
SNX22-204ENST00000560607 PTPRKQ15262 1439 aa26.21■■□□□ 1.79
SNX22-204ENST00000560607 CDK11AQ9UQ88 783 aaPredicted RBP26.19■■□□□ 1.78
SNX22-204ENST00000560607 CEP170BQ9Y4F5 1589 aaPredicted RBP26.19■■□□□ 1.78
SNX22-204ENST00000560607 SUPT6HQ7KZ85 1726 aaKnown RBP26.19■■□□□ 1.78
SNX22-204ENST00000560607 ZNF142P52746 1687 aaPredicted RBP26.19■■□□□ 1.78
SNX22-204ENST00000560607 MYO3AQ8NEV4 1616 aa26.17■■□□□ 1.78
SNX22-204ENST00000560607 ATP1B4Q9UN42 357 aaPredicted RBP26.17■■□□□ 1.78
SNX22-204ENST00000560607 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
SNX22-204ENST00000560607 FMN1Q68DA7 1419 aa26.14■■□□□ 1.77
SNX22-204ENST00000560607 KIF14Q15058 1648 aa26.12■■□□□ 1.77
SNX22-204ENST00000560607 ALKQ9UM73 1620 aa26.08■■□□□ 1.77
SNX22-204ENST00000560607 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
SNX22-204ENST00000560607 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
SNX22-204ENST00000560607 VPS8Q8N3P4 1428 aa26.05■■□□□ 1.76
SNX22-204ENST00000560607 CLTCQ00610 1675 aaKnown RBP26.04■■□□□ 1.76
SNX22-204ENST00000560607 A2ML1A8K2U0 1454 aa26.04■■□□□ 1.76
SNX22-204ENST00000560607 ABCC1P33527 1531 aa26.03■■□□□ 1.76
SNX22-204ENST00000560607 POTEAQ6S8J7 498 aa26.02■■□□□ 1.76
SNX22-204ENST00000560607 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
SNX22-204ENST00000560607 DNMT1P26358 1616 aaKnown RBP26■■□□□ 1.75
SNX22-204ENST00000560607 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
SNX22-204ENST00000560607 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
SNX22-204ENST00000560607 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
SNX22-204ENST00000560607 GGT6Q6P531 493 aa25.98■■□□□ 1.75
SNX22-204ENST00000560607 ITSN2Q9NZM3 1697 aa25.98■■□□□ 1.75
SNX22-204ENST00000560607 NEURL4Q96JN8 1562 aa25.98■■□□□ 1.75
SNX22-204ENST00000560607 ANKLE2Q86XL3 938 aa25.97■■□□□ 1.75
SNX22-204ENST00000560607 VWDEQ8N2E2 1590 aa25.96■■□□□ 1.75
SNX22-204ENST00000560607 POLR1AO95602 1720 aaPredicted RBP25.96■■□□□ 1.75
SNX22-204ENST00000560607 SPAG9O60271 1321 aaKnown RBP25.93■■□□□ 1.74
SNX22-204ENST00000560607 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
SNX22-204ENST00000560607 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
SNX22-204ENST00000560607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.73
SNX22-204ENST00000560607 CCDC18Q5T9S5 1454 aa25.86■■□□□ 1.73
SNX22-204ENST00000560607 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
SNX22-204ENST00000560607 LRRC7Q96NW7 1537 aa25.86■■□□□ 1.73
SNX22-204ENST00000560607 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms