RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 NISCHQ9Y2I1 1504 aa40.08■■■■■ 4.01
SNX22-204ENST00000560607 ABCC9O60706 1549 aa37.84■■■■□ 3.65
SNX22-204ENST00000560607 DNAJC5BQ9UF47 199 aa36.69■■■■□ 3.46
SNX22-204ENST00000560607 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.42
SNX22-204ENST00000560607 RB1CC1Q8TDY2 1594 aa35.39■■■■□ 3.26
SNX22-204ENST00000560607 PABPN1Q86U42 306 aaKnown RBP eCLIP35.09■■■■□ 3.21
SNX22-204ENST00000560607 NACADO15069 1562 aa34.84■■■■□ 3.17
SNX22-204ENST00000560607 DNAJC5Q9H3Z4 198 aa34.67■■■■□ 3.14
SNX22-204ENST00000560607 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
SNX22-204ENST00000560607 UNC13AQ9UPW8 1703 aa34.48■■■■□ 3.11
SNX22-204ENST00000560607 BICRAQ9NZM4 1560 aa34.38■■■■□ 3.09
SNX22-204ENST00000560607 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
SNX22-204ENST00000560607 CC2D2AQ9P2K1 1620 aa34.06■■■■□ 3.04
SNX22-204ENST00000560607 MYO15BQ96JP2 1530 aa33.91■■■■□ 3.02
SNX22-204ENST00000560607 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
SNX22-204ENST00000560607 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
SNX22-204ENST00000560607 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
SNX22-204ENST00000560607 CUX2O14529 1486 aa33.12■■■□□ 2.89
SNX22-204ENST00000560607 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
SNX22-204ENST00000560607 ZCCHC6Q5VYS8 1495 aaKnown RBP32.91■■■□□ 2.86
SNX22-204ENST00000560607 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
SNX22-204ENST00000560607 TRIM41Q8WV44 630 aa32.65■■■□□ 2.82
SNX22-204ENST00000560607 NCAPD3P42695 1498 aa32.22■■■□□ 2.75
SNX22-204ENST00000560607 NESP48681 1621 aa32.11■■■□□ 2.73
SNX22-204ENST00000560607 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
SNX22-204ENST00000560607 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
SNX22-204ENST00000560607 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
SNX22-204ENST00000560607 SMARCA2P51531 1590 aa31.75■■■□□ 2.67
SNX22-204ENST00000560607 LAMC3Q9Y6N6 1575 aa31.65■■■□□ 2.66
SNX22-204ENST00000560607 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
SNX22-204ENST00000560607 KIF21AQ7Z4S6 1674 aa31.57■■■□□ 2.65
SNX22-204ENST00000560607 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
SNX22-204ENST00000560607 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
SNX22-204ENST00000560607 OSCARQ8IYS5 282 aa31.5■■■□□ 2.63
SNX22-204ENST00000560607 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
SNX22-204ENST00000560607 MRC2Q9UBG0 1479 aa31.35■■■□□ 2.61
SNX22-204ENST00000560607 WDR62O43379 1518 aa31.28■■■□□ 2.6
SNX22-204ENST00000560607 CADPSQ9ULU8 1353 aa31.2■■■□□ 2.59
SNX22-204ENST00000560607 PEG3Q9GZU2 1588 aa31.2■■■□□ 2.58
SNX22-204ENST00000560607 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
SNX22-204ENST00000560607 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
SNX22-204ENST00000560607 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
SNX22-204ENST00000560607 AEBP2Q6ZN18 517 aaPredicted RBP31.04■■■□□ 2.56
SNX22-204ENST00000560607 CEP164Q9UPV0 1460 aa30.97■■■□□ 2.55
SNX22-204ENST00000560607 TRHP20396 242 aaPredicted RBP30.96■■■□□ 2.55
SNX22-204ENST00000560607 ARHGEF11O15085 1522 aa30.89■■■□□ 2.54
SNX22-204ENST00000560607 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
SNX22-204ENST00000560607 CYB5RLQ6IPT4 315 aa30.86■■■□□ 2.53
SNX22-204ENST00000560607 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.53
SNX22-204ENST00000560607 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
SNX22-204ENST00000560607 CFTRP13569 1480 aa30.54■■■□□ 2.48
SNX22-204ENST00000560607 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
SNX22-204ENST00000560607 ZNF608Q9ULD9 1512 aaPredicted RBP30.48■■■□□ 2.47
SNX22-204ENST00000560607 WIZO95785 1651 aa30.41■■■□□ 2.46
SNX22-204ENST00000560607 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
SNX22-204ENST00000560607 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
SNX22-204ENST00000560607 FBLN2P98095 1184 aa30.23■■■□□ 2.43
SNX22-204ENST00000560607 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
SNX22-204ENST00000560607 CHD1O14646 1710 aa30.18■■■□□ 2.42
SNX22-204ENST00000560607 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
SNX22-204ENST00000560607 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.4
SNX22-204ENST00000560607 PRDM2Q13029 1718 aa29.98■■■□□ 2.39
SNX22-204ENST00000560607 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
SNX22-204ENST00000560607 TOP2AP11388 1531 aaKnown RBP29.94■■■□□ 2.38
SNX22-204ENST00000560607 TARBP1Q13395 1621 aaKnown RBP29.86■■■□□ 2.37
SNX22-204ENST00000560607 ILDR1Q86SU0 546 aaPredicted RBP29.85■■■□□ 2.37
SNX22-204ENST00000560607 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
SNX22-204ENST00000560607 DNMBPQ6XZF7 1577 aa29.82■■■□□ 2.36
SNX22-204ENST00000560607 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
SNX22-204ENST00000560607 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
SNX22-204ENST00000560607 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
SNX22-204ENST00000560607 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
SNX22-204ENST00000560607 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
SNX22-204ENST00000560607 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
SNX22-204ENST00000560607 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
SNX22-204ENST00000560607 RAD54L2Q9Y4B4 1467 aa29.63■■■□□ 2.33
SNX22-204ENST00000560607 SOGA1O94964 1423 aa29.59■■■□□ 2.33
SNX22-204ENST00000560607 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
SNX22-204ENST00000560607 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
SNX22-204ENST00000560607 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
SNX22-204ENST00000560607 WDR97A6NE52 1622 aa29.46■■■□□ 2.31
SNX22-204ENST00000560607 GRIN2BQ13224 1484 aa29.44■■■□□ 2.3
SNX22-204ENST00000560607 KDM4FA0A1W2PPD8 638 aa29.39■■■□□ 2.3
SNX22-204ENST00000560607 FGD5Q6ZNL6 1462 aa29.32■■■□□ 2.28
SNX22-204ENST00000560607 ERCC6L2Q5T890 1561 aa29.3■■■□□ 2.28
SNX22-204ENST00000560607 KIF13AQ9H1H9 1805 aa29.28■■■□□ 2.28
SNX22-204ENST00000560607 FAM69CQ0P6D2 419 aa29.18■■■□□ 2.26
SNX22-204ENST00000560607 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
SNX22-204ENST00000560607 PBRM1Q86U86 1689 aa29.13■■■□□ 2.25
SNX22-204ENST00000560607 CUX1P39880 1505 aa29.07■■■□□ 2.24
SNX22-204ENST00000560607 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
SNX22-204ENST00000560607 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
SNX22-204ENST00000560607 KDM6BO15054 1643 aa29.01■■■□□ 2.23
SNX22-204ENST00000560607 NUP160Q12769 1436 aa29■■■□□ 2.23
SNX22-204ENST00000560607 NPM1P06748 294 aaKnown RBP eCLIP28.98■■■□□ 2.23
SNX22-204ENST00000560607 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
SNX22-204ENST00000560607 ABCA5Q8WWZ7 1642 aa28.93■■■□□ 2.22
SNX22-204ENST00000560607 ABCA10Q8WWZ4 1543 aa28.9■■■□□ 2.22
SNX22-204ENST00000560607 DIP2BQ9P265 1576 aa28.88■■■□□ 2.21
SNX22-204ENST00000560607 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms