RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
SNRPA1-209ENST00000560307 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
SNRPA1-209ENST00000560307 ZSWIM6Q9HCJ5 1215 aa9.82□□□□□ -0.84
SNRPA1-209ENST00000560307 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
SNRPA1-209ENST00000560307 CABP2Q9NPB3 220 aa9.81□□□□□ -0.84
SNRPA1-209ENST00000560307 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-209ENST00000560307 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNRPA1-209ENST00000560307 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-209ENST00000560307 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
SNRPA1-209ENST00000560307 BBXQ8WY36 941 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-209ENST00000560307 GSE1Q14687 1217 aa9.77□□□□□ -0.85
SNRPA1-209ENST00000560307 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-209ENST00000560307 GPR153Q6NV75 609 aa9.76□□□□□ -0.85
SNRPA1-209ENST00000560307 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
SNRPA1-209ENST00000560307 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
SNRPA1-209ENST00000560307 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
SNRPA1-209ENST00000560307 ZNF316A6NFI3 1004 aaPredicted RBP9.7□□□□□ -0.86
SNRPA1-209ENST00000560307 RGL2O15211 777 aa9.7□□□□□ -0.86
SNRPA1-209ENST00000560307 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
SNRPA1-209ENST00000560307 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-209ENST00000560307 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-209ENST00000560307 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-209ENST00000560307 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
SNRPA1-209ENST00000560307 TPRNQ4KMQ1 711 aa9.66□□□□□ -0.86
SNRPA1-209ENST00000560307 SPRYD3Q8NCJ5 442 aa9.66□□□□□ -0.86
SNRPA1-209ENST00000560307 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNRPA1-209ENST00000560307 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
SNRPA1-209ENST00000560307 CHGAP10645 457 aaKnown RBP9.63□□□□□ -0.87
SNRPA1-209ENST00000560307 PBX2P40425 430 aa9.63□□□□□ -0.87
SNRPA1-209ENST00000560307 MICALL2Q8IY33 904 aa9.63□□□□□ -0.87
SNRPA1-209ENST00000560307 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
SNRPA1-209ENST00000560307 ZCCHC6Q5VYS8 1495 aaKnown RBP9.61□□□□□ -0.87
SNRPA1-209ENST00000560307 MYT1Q01538 1121 aa9.61□□□□□ -0.87
SNRPA1-209ENST00000560307 MYO15BQ96JP2 1530 aa9.61□□□□□ -0.87
SNRPA1-209ENST00000560307 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
SNRPA1-209ENST00000560307 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
SNRPA1-209ENST00000560307 ADGRD1Q6QNK2 874 aa9.55□□□□□ -0.88
SNRPA1-209ENST00000560307 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
SNRPA1-209ENST00000560307 RGS20O76081 388 aa9.52□□□□□ -0.89
SNRPA1-209ENST00000560307 NUDT7P0C024 238 aa9.52□□□□□ -0.89
SNRPA1-209ENST00000560307 KCTD12Q96CX2 325 aaKnown RBP9.52□□□□□ -0.89
SNRPA1-209ENST00000560307 ZEB1P37275 1124 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-209ENST00000560307 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
SNRPA1-209ENST00000560307 LHX6Q9UPM6 363 aa9.49□□□□□ -0.89
SNRPA1-209ENST00000560307 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
SNRPA1-209ENST00000560307 NBR1Q14596 966 aa9.48□□□□□ -0.89
SNRPA1-209ENST00000560307 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-209ENST00000560307 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
SNRPA1-209ENST00000560307 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
SNRPA1-209ENST00000560307 Q6ZNB5 142 aa9.46□□□□□ -0.9
SNRPA1-209ENST00000560307 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
SNRPA1-209ENST00000560307 PTPN5P54829 565 aa9.43□□□□□ -0.9
SNRPA1-209ENST00000560307 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
SNRPA1-209ENST00000560307 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
SNRPA1-209ENST00000560307 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
SNRPA1-209ENST00000560307 A0A0G2JS52 829 aa9.39□□□□□ -0.91
SNRPA1-209ENST00000560307 TK2O00142 265 aa9.39□□□□□ -0.91
SNRPA1-209ENST00000560307 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
SNRPA1-209ENST00000560307 HRO43593 1189 aa9.38□□□□□ -0.91
SNRPA1-209ENST00000560307 RNF25Q96BH1 459 aaPredicted RBP9.38□□□□□ -0.91
SNRPA1-209ENST00000560307 SOX12O15370 315 aa9.37□□□□□ -0.91
SNRPA1-209ENST00000560307 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
SNRPA1-209ENST00000560307 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
SNRPA1-209ENST00000560307 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
SNRPA1-209ENST00000560307 PSEN2P49810 448 aa9.35□□□□□ -0.91
SNRPA1-209ENST00000560307 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
SNRPA1-209ENST00000560307 IFFO2Q5TF58 517 aa9.34□□□□□ -0.91
SNRPA1-209ENST00000560307 STK25O00506 426 aa9.33□□□□□ -0.92
SNRPA1-209ENST00000560307 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
SNRPA1-209ENST00000560307 DNAJC5Q9H3Z4 198 aa9.32□□□□□ -0.92
SNRPA1-209ENST00000560307 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-209ENST00000560307 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
SNRPA1-209ENST00000560307 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-209ENST00000560307 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-209ENST00000560307 SLC34A2O95436 690 aa9.25□□□□□ -0.93
SNRPA1-209ENST00000560307 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
SNRPA1-209ENST00000560307 STK24Q9Y6E0 443 aa9.25□□□□□ -0.93
SNRPA1-209ENST00000560307 KIF3CO14782 793 aa9.23□□□□□ -0.93
SNRPA1-209ENST00000560307 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
SNRPA1-209ENST00000560307 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
SNRPA1-209ENST00000560307 NLRP6P59044 892 aa9.21□□□□□ -0.94
SNRPA1-209ENST00000560307 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
SNRPA1-209ENST00000560307 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-209ENST00000560307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-209ENST00000560307 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
SNRPA1-209ENST00000560307 ZFP91Q96JP5 570 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-209ENST00000560307 ABCC9O60706 1549 aa9.18□□□□□ -0.94
SNRPA1-209ENST00000560307 TMC2Q8TDI7 906 aa9.18□□□□□ -0.94
SNRPA1-209ENST00000560307 RYDENQ9NUL5 291 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-209ENST00000560307 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
SNRPA1-209ENST00000560307 ACIN1Q9UKV3 1341 aaKnown RBP9.16□□□□□ -0.94
SNRPA1-209ENST00000560307 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
SNRPA1-209ENST00000560307 WNT2BQ93097 391 aa9.16□□□□□ -0.94
SNRPA1-209ENST00000560307 LAPTM4AQ15012 233 aa9.15□□□□□ -0.94
SNRPA1-209ENST00000560307 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-209ENST00000560307 LCE2BO14633 110 aa9.12□□□□□ -0.95
SNRPA1-209ENST00000560307 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
SNRPA1-209ENST00000560307 CENPBP07199 599 aaPredicted RBP9.11□□□□□ -0.95
SNRPA1-209ENST00000560307 LOC105371045A0A1W2PR82 267 aa9.1□□□□□ -0.95
SNRPA1-209ENST00000560307 P3H3Q8IVL6 736 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms