RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 PLCH2O75038 1416 aa18.46■□□□□ 0.55
HERC1-205ENST00000559886 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
HERC1-205ENST00000559886 CAMSAP2Q08AD1 1489 aa18.45■□□□□ 0.54
HERC1-205ENST00000559886 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
HERC1-205ENST00000559886 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
HERC1-205ENST00000559886 ITGAEP38570 1179 aa18.42■□□□□ 0.54
HERC1-205ENST00000559886 ZNF777Q9ULD5 760 aaPredicted RBP18.42■□□□□ 0.54
HERC1-205ENST00000559886 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
HERC1-205ENST00000559886 GLI2P10070 1586 aa18.41■□□□□ 0.54
HERC1-205ENST00000559886 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
HERC1-205ENST00000559886 DIP2BQ9P265 1576 aa18.4■□□□□ 0.54
HERC1-205ENST00000559886 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
HERC1-205ENST00000559886 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
HERC1-205ENST00000559886 CD109Q6YHK3 1445 aa18.38■□□□□ 0.53
HERC1-205ENST00000559886 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
HERC1-205ENST00000559886 DAPK1P53355 1430 aa18.36■□□□□ 0.53
HERC1-205ENST00000559886 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
HERC1-205ENST00000559886 ABCC5O15440 1437 aa18.35■□□□□ 0.53
HERC1-205ENST00000559886 FANCAO15360 1455 aa18.35■□□□□ 0.53
HERC1-205ENST00000559886 ARHGEF5Q12774 1597 aa18.35■□□□□ 0.53
HERC1-205ENST00000559886 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
HERC1-205ENST00000559886 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
HERC1-205ENST00000559886 MBD5Q9P267 1494 aa18.34■□□□□ 0.53
HERC1-205ENST00000559886 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
HERC1-205ENST00000559886 ABCC1P33527 1531 aa18.33■□□□□ 0.52
HERC1-205ENST00000559886 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.52
HERC1-205ENST00000559886 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
HERC1-205ENST00000559886 FAM69CQ0P6D2 419 aa18.32■□□□□ 0.52
HERC1-205ENST00000559886 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
HERC1-205ENST00000559886 RSPH4AQ5TD94 716 aa18.3■□□□□ 0.52
HERC1-205ENST00000559886 ARHGEF12Q9NZN5 1544 aa18.3■□□□□ 0.52
HERC1-205ENST00000559886 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
HERC1-205ENST00000559886 AKNAQ7Z591 1439 aa18.28■□□□□ 0.52
HERC1-205ENST00000559886 SHANK2Q9UPX8 1470 aa18.28■□□□□ 0.52
HERC1-205ENST00000559886 ADGBQ8N7X0 1667 aa18.28■□□□□ 0.52
HERC1-205ENST00000559886 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
HERC1-205ENST00000559886 ROCK1Q13464 1354 aa18.27■□□□□ 0.51
HERC1-205ENST00000559886 HFM1A2PYH4 1435 aa18.27■□□□□ 0.51
HERC1-205ENST00000559886 NEO1Q92859 1461 aa18.27■□□□□ 0.51
HERC1-205ENST00000559886 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
HERC1-205ENST00000559886 TSPOAP1O95153 1857 aa18.26■□□□□ 0.51
HERC1-205ENST00000559886 SETD5Q9C0A6 1442 aa18.26■□□□□ 0.51
HERC1-205ENST00000559886 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
HERC1-205ENST00000559886 ADGRL2O95490 1459 aa18.25■□□□□ 0.51
HERC1-205ENST00000559886 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 GCC2Q8IWJ2 1684 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 NAIPQ13075 1403 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 MAST1Q9Y2H9 1570 aa18.24■□□□□ 0.51
HERC1-205ENST00000559886 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
HERC1-205ENST00000559886 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
HERC1-205ENST00000559886 NCOA1Q15788 1441 aa18.22■□□□□ 0.51
HERC1-205ENST00000559886 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
HERC1-205ENST00000559886 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
HERC1-205ENST00000559886 ANKRD30AQ9BXX3 1397 aa18.2■□□□□ 0.5
HERC1-205ENST00000559886 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
HERC1-205ENST00000559886 HRCP23327 699 aa18.18■□□□□ 0.5
HERC1-205ENST00000559886 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
HERC1-205ENST00000559886 ZNF518AQ6AHZ1 1483 aa18.17■□□□□ 0.5
HERC1-205ENST00000559886 PLXNC1O60486 1568 aa18.16■□□□□ 0.5
HERC1-205ENST00000559886 POGZQ7Z3K3 1410 aa18.16■□□□□ 0.5
HERC1-205ENST00000559886 RTEL1-TNFRSF6BF6WH68 1400 aa18.16■□□□□ 0.5
HERC1-205ENST00000559886 KDM5CP41229 1560 aa18.14■□□□□ 0.5
HERC1-205ENST00000559886 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.5
HERC1-205ENST00000559886 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
HERC1-205ENST00000559886 DENND4BO75064 1496 aaPredicted RBP18.14■□□□□ 0.49
HERC1-205ENST00000559886 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
HERC1-205ENST00000559886 KDM6BO15054 1643 aa18.14■□□□□ 0.49
HERC1-205ENST00000559886 RICTORQ6R327 1708 aa18.14■□□□□ 0.49
HERC1-205ENST00000559886 KIF15Q9NS87 1388 aa18.13■□□□□ 0.49
HERC1-205ENST00000559886 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
HERC1-205ENST00000559886 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
HERC1-205ENST00000559886 ANKRD50Q9ULJ7 1429 aa18.1■□□□□ 0.49
HERC1-205ENST00000559886 MLH3Q9UHC1 1453 aa18.09■□□□□ 0.49
HERC1-205ENST00000559886 TRHP20396 242 aaPredicted RBP18.09■□□□□ 0.49
HERC1-205ENST00000559886 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.49
HERC1-205ENST00000559886 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.49
HERC1-205ENST00000559886 RAPGEF3O95398 923 aa18.08■□□□□ 0.49
HERC1-205ENST00000559886 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
HERC1-205ENST00000559886 CCER1Q8TC90 406 aaPredicted RBP18.07■□□□□ 0.48
HERC1-205ENST00000559886 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
HERC1-205ENST00000559886 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
HERC1-205ENST00000559886 ZMYM4Q5VZL5 1548 aa18.05■□□□□ 0.48
HERC1-205ENST00000559886 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
HERC1-205ENST00000559886 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
HERC1-205ENST00000559886 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
HERC1-205ENST00000559886 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
HERC1-205ENST00000559886 MAGI2Q86UL8 1455 aa17.99■□□□□ 0.47
HERC1-205ENST00000559886 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
HERC1-205ENST00000559886 DHX29Q7Z478 1369 aaKnown RBP17.99■□□□□ 0.47
HERC1-205ENST00000559886 DIP2CQ9Y2E4 1556 aa17.98■□□□□ 0.47
HERC1-205ENST00000559886 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
HERC1-205ENST00000559886 UNC13BO14795 1591 aa17.97■□□□□ 0.47
HERC1-205ENST00000559886 A2MP01023 1474 aa17.97■□□□□ 0.47
HERC1-205ENST00000559886 CLSPNQ9HAW4 1339 aa17.96■□□□□ 0.47
HERC1-205ENST00000559886 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.46
HERC1-205ENST00000559886 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
HERC1-205ENST00000559886 PZPP20742 1482 aa17.94■□□□□ 0.46
HERC1-205ENST00000559886 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms